EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000010596 (Gene tree)
Gene ID: 108443126
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 21303 bases
Position: chrKV575811.1:163560-184862
Accession: 108443126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000004137	RRM_1	PF00076.22	2.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000007499	-	5385	XM_017723561	ENSPNAP00000004137	234 (aa)	XP_017579050	UPI0008143A98

Gene Model

Click here to download ENSPNAG00000010596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000010596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000010596	rbm38	97	72.247	ENSPNAG00000015123	-	95	77.863
ENSPNAG00000010596	rbm38	74	67.568	ENSPNAG00000018604	rbm24b	97	59.912
ENSPNAG00000010596	rbm38	50	35.714	ENSPNAG00000011639	dazap1	56	34.483
ENSPNAG00000010596	rbm38	62	72.000	ENSPNAG00000003816	rbm24a	97	57.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000010596	rbm38	88	64.319	ENSG00000132819	RBM38	93	88.596	Homo_sapiens
ENSPNAG00000010596	rbm38	82	79.592	ENSAPOG00000009939	-	89	79.592	Acanthochromis_polyacanthus
ENSPNAG00000010596	rbm38	84	67.488	ENSAPOG00000003301	rbm38	81	67.488	Acanthochromis_polyacanthus
ENSPNAG00000010596	rbm38	97	71.064	ENSACIG00000012502	-	95	91.892	Amphilophus_citrinellus
ENSPNAG00000010596	rbm38	96	60.251	ENSACIG00000000010	rbm38	95	60.251	Amphilophus_citrinellus
ENSPNAG00000010596	rbm38	84	67.488	ENSAOCG00000013497	-	81	67.488	Amphiprion_ocellaris
ENSPNAG00000010596	rbm38	82	77.551	ENSAOCG00000012559	RBM38	99	70.638	Amphiprion_ocellaris
ENSPNAG00000010596	rbm38	82	77.551	ENSAPEG00000023581	-	96	70.213	Amphiprion_percula
ENSPNAG00000010596	rbm38	84	67.488	ENSAPEG00000013137	rbm38	85	68.182	Amphiprion_percula
ENSPNAG00000010596	rbm38	84	65.517	ENSATEG00000016366	rbm38	78	69.945	Anabas_testudineus
ENSPNAG00000010596	rbm38	82	80.102	ENSATEG00000016710	-	91	71.429	Anabas_testudineus
ENSPNAG00000010596	rbm38	91	64.414	ENSACAG00000016238	RBM38	87	64.414	Anolis_carolinensis
ENSPNAG00000010596	rbm38	88	65.258	ENSANAG00000031959	RBM38	79	91.667	Aotus_nancymaae
ENSPNAG00000010596	rbm38	88	76.526	ENSACLG00000019514	-	86	76.526	Astatotilapia_calliptera
ENSPNAG00000010596	rbm38	97	72.247	ENSAMXG00000015601	-	96	72.247	Astyanax_mexicanus
ENSPNAG00000010596	rbm38	99	73.276	ENSAMXG00000038120	rbm38	99	73.276	Astyanax_mexicanus
ENSPNAG00000010596	rbm38	93	61.607	ENSBTAG00000008105	RBM38	89	61.607	Bos_taurus
ENSPNAG00000010596	rbm38	72	53.933	WBGene00006321	sup-12	60	81.319	Caenorhabditis_elegans
ENSPNAG00000010596	rbm38	88	64.789	ENSCJAG00000019139	RBM38	79	91.667	Callithrix_jacchus
ENSPNAG00000010596	rbm38	93	63.839	ENSCAFG00020021943	RBM38	89	63.839	Canis_lupus_dingo
ENSPNAG00000010596	rbm38	93	62.054	ENSCHIG00000002609	RBM38	89	62.054	Capra_hircus
ENSPNAG00000010596	rbm38	88	65.728	ENSCPOG00000012781	RBM38	85	65.728	Cavia_porcellus
ENSPNAG00000010596	rbm38	88	64.789	ENSCCAG00000036872	RBM38	79	91.667	Cebus_capucinus
ENSPNAG00000010596	rbm38	76	69.892	ENSCATG00000032133	RBM38	79	91.667	Cercocebus_atys
ENSPNAG00000010596	rbm38	93	63.839	ENSCLAG00000005906	RBM38	93	63.839	Chinchilla_lanigera
ENSPNAG00000010596	rbm38	76	69.892	ENSCSAG00000015503	RBM38	78	69.892	Chlorocebus_sabaeus
ENSPNAG00000010596	rbm38	91	65.297	ENSCPBG00000024059	RBM38	97	65.297	Chrysemys_picta_bellii
ENSPNAG00000010596	rbm38	62	65.359	ENSCING00000025102	-	70	61.585	Ciona_intestinalis
ENSPNAG00000010596	rbm38	63	64.286	ENSCSAVG00000001132	-	58	64.286	Ciona_savignyi
ENSPNAG00000010596	rbm38	76	51.913	ENSCANG00000030105	-	67	51.913	Colobus_angolensis_palliatus
ENSPNAG00000010596	rbm38	75	71.429	ENSCGRG00001012928	Rbm38	85	66.197	Cricetulus_griseus_chok1gshd
ENSPNAG00000010596	rbm38	82	78.571	ENSCSEG00000004701	-	96	70.213	Cynoglossus_semilaevis
ENSPNAG00000010596	rbm38	71	68.639	ENSCSEG00000020943	rbm38	75	58.696	Cynoglossus_semilaevis
ENSPNAG00000010596	rbm38	83	65.174	ENSCVAG00000015952	rbm38	95	59.167	Cyprinodon_variegatus
ENSPNAG00000010596	rbm38	82	77.436	ENSCVAG00000005472	-	80	77.436	Cyprinodon_variegatus
ENSPNAG00000010596	rbm38	100	72.766	ENSDARG00000058818	rbm38	100	72.766	Danio_rerio
ENSPNAG00000010596	rbm38	76	71.739	ENSDNOG00000032004	RBM38	88	71.739	Dasypus_novemcinctus
ENSPNAG00000010596	rbm38	93	61.607	ENSECAG00000007700	RBM38	89	61.607	Equus_caballus
ENSPNAG00000010596	rbm38	88	61.682	ENSEEUG00000013489	RBM38	85	63.084	Erinaceus_europaeus
ENSPNAG00000010596	rbm38	90	63.964	ENSELUG00000000585	-	98	63.964	Esox_lucius
ENSPNAG00000010596	rbm38	97	70.690	ENSELUG00000005849	-	96	70.690	Esox_lucius
ENSPNAG00000010596	rbm38	76	70.968	ENSFCAG00000042916	RBM38	79	90.625	Felis_catus
ENSPNAG00000010596	rbm38	76	72.778	ENSFALG00000010805	RBM38	91	72.778	Ficedula_albicollis
ENSPNAG00000010596	rbm38	88	72.857	ENSFHEG00000006160	-	94	72.857	Fundulus_heteroclitus
ENSPNAG00000010596	rbm38	98	59.091	ENSFHEG00000017748	rbm38	94	59.091	Fundulus_heteroclitus
ENSPNAG00000010596	rbm38	77	74.595	ENSGMOG00000016655	-	99	76.216	Gadus_morhua
ENSPNAG00000010596	rbm38	77	72.043	ENSGALG00000026081	RBM38	97	65.297	Gallus_gallus
ENSPNAG00000010596	rbm38	88	70.813	ENSGACG00000009873	-	93	70.813	Gasterosteus_aculeatus
ENSPNAG00000010596	rbm38	76	72.881	ENSGACG00000015224	rbm38	86	72.881	Gasterosteus_aculeatus
ENSPNAG00000010596	rbm38	91	65.753	ENSGAGG00000001187	RBM38	97	65.753	Gopherus_agassizii
ENSPNAG00000010596	rbm38	97	71.739	ENSHBUG00000011778	-	96	71.739	Haplochromis_burtoni
ENSPNAG00000010596	rbm38	96	60.669	ENSHBUG00000012058	rbm38	95	60.669	Haplochromis_burtoni
ENSPNAG00000010596	rbm38	88	64.319	ENSHGLG00000015077	RBM38	84	66.667	Heterocephalus_glaber_female
ENSPNAG00000010596	rbm38	85	74.146	ENSHCOG00000005622	-	59	75.122	Hippocampus_comes
ENSPNAG00000010596	rbm38	97	52.838	ENSHCOG00000019040	rbm38	92	52.838	Hippocampus_comes
ENSPNAG00000010596	rbm38	97	69.869	ENSIPUG00000019349	-	96	69.869	Ictalurus_punctatus
ENSPNAG00000010596	rbm38	86	55.660	ENSKMAG00000012402	rbm38	88	55.660	Kryptolebias_marmoratus
ENSPNAG00000010596	rbm38	96	61.925	ENSLBEG00000018878	rbm38	95	61.925	Labrus_bergylta
ENSPNAG00000010596	rbm38	97	70.000	ENSLBEG00000016163	RBM38	96	70.870	Labrus_bergylta
ENSPNAG00000010596	rbm38	100	72.650	ENSLOCG00000003456	rbm38	99	72.650	Lepisosteus_oculatus
ENSPNAG00000010596	rbm38	76	69.892	ENSMFAG00000043808	RBM38	79	91.667	Macaca_fascicularis
ENSPNAG00000010596	rbm38	76	69.892	ENSMMUG00000031391	RBM38	79	91.667	Macaca_mulatta
ENSPNAG00000010596	rbm38	76	69.892	ENSMNEG00000034683	RBM38	79	91.667	Macaca_nemestrina
ENSPNAG00000010596	rbm38	82	80.102	ENSMAMG00000020499	RBM38	96	71.064	Mastacembelus_armatus
ENSPNAG00000010596	rbm38	96	61.667	ENSMAMG00000024135	rbm38	95	61.667	Mastacembelus_armatus
ENSPNAG00000010596	rbm38	97	71.739	ENSMZEG00005000849	-	96	71.739	Maylandia_zebra
ENSPNAG00000010596	rbm38	96	60.669	ENSMZEG00005026036	rbm38	95	60.669	Maylandia_zebra
ENSPNAG00000010596	rbm38	75	71.429	ENSMAUG00000021211	Rbm38	85	66.667	Mesocricetus_auratus
ENSPNAG00000010596	rbm38	88	65.728	ENSMICG00000038011	RBM38	94	65.728	Microcebus_murinus
ENSPNAG00000010596	rbm38	75	70.879	ENSMOCG00000008715	Rbm38	85	66.197	Microtus_ochrogaster
ENSPNAG00000010596	rbm38	97	70.638	ENSMMOG00000020051	-	96	72.340	Mola_mola
ENSPNAG00000010596	rbm38	79	71.958	ENSMODG00000016458	RBM38	92	63.636	Monodelphis_domestica
ENSPNAG00000010596	rbm38	79	79.474	ENSMALG00000004680	RBM38	72	79.474	Monopterus_albus
ENSPNAG00000010596	rbm38	71	69.822	ENSMALG00000022327	rbm38	72	69.822	Monopterus_albus
ENSPNAG00000010596	rbm38	88	61.972	MGP_CAROLIEiJ_G0024745	Rbm38	60	91.489	Mus_caroli
ENSPNAG00000010596	rbm38	88	61.972	ENSMUSG00000027510	Rbm38	60	91.489	Mus_musculus
ENSPNAG00000010596	rbm38	88	61.972	MGP_PahariEiJ_G0026186	Rbm38	60	91.489	Mus_pahari
ENSPNAG00000010596	rbm38	88	61.972	MGP_SPRETEiJ_G0025665	Rbm38	60	91.489	Mus_spretus
ENSPNAG00000010596	rbm38	75	71.585	ENSMPUG00000006518	RBM38	92	71.351	Mustela_putorius_furo
ENSPNAG00000010596	rbm38	93	62.054	ENSMLUG00000011140	RBM38	99	62.054	Myotis_lucifugus
ENSPNAG00000010596	rbm38	97	71.308	ENSNBRG00000022545	-	96	71.308	Neolamprologus_brichardi
ENSPNAG00000010596	rbm38	96	61.088	ENSNBRG00000022685	rbm38	95	61.088	Neolamprologus_brichardi
ENSPNAG00000010596	rbm38	53	75.610	ENSMEUG00000005475	-	88	75.610	Notamacropus_eugenii
ENSPNAG00000010596	rbm38	88	65.728	ENSODEG00000007980	RBM38	85	65.728	Octodon_degus
ENSPNAG00000010596	rbm38	96	60.251	ENSONIG00000017073	rbm38	97	60.251	Oreochromis_niloticus
ENSPNAG00000010596	rbm38	97	71.308	ENSONIG00000020324	-	96	71.308	Oreochromis_niloticus
ENSPNAG00000010596	rbm38	91	63.927	ENSOANG00000009259	RBM38	81	63.927	Ornithorhynchus_anatinus
ENSPNAG00000010596	rbm38	96	55.285	ENSORLG00000012154	rbm38	90	58.051	Oryzias_latipes
ENSPNAG00000010596	rbm38	82	73.980	ENSORLG00000027180	-	96	67.089	Oryzias_latipes
ENSPNAG00000010596	rbm38	96	56.911	ENSORLG00020017871	rbm38	95	56.911	Oryzias_latipes_hni
ENSPNAG00000010596	rbm38	82	73.980	ENSORLG00020020751	-	96	67.089	Oryzias_latipes_hni
ENSPNAG00000010596	rbm38	84	62.562	ENSORLG00015012606	rbm38	79	64.516	Oryzias_latipes_hsok
ENSPNAG00000010596	rbm38	82	73.980	ENSORLG00015017040	-	96	67.797	Oryzias_latipes_hsok
ENSPNAG00000010596	rbm38	95	57.787	ENSOMEG00000006805	rbm38	94	57.787	Oryzias_melastigma
ENSPNAG00000010596	rbm38	82	74.490	ENSOMEG00000023912	-	96	67.660	Oryzias_melastigma
ENSPNAG00000010596	rbm38	88	64.319	ENSOGAG00000029136	RBM38	84	64.319	Otolemur_garnettii
ENSPNAG00000010596	rbm38	76	70.968	ENSPPRG00000009507	RBM38	79	90.625	Panthera_pardus
ENSPNAG00000010596	rbm38	54	84.127	ENSPTRG00000045845	-	69	84.127	Pan_troglodytes
ENSPNAG00000010596	rbm38	76	69.892	ENSPTRG00000013661	RBM38	79	91.667	Pan_troglodytes
ENSPNAG00000010596	rbm38	76	55.435	ENSPANG00000033127	-	78	55.435	Papio_anubis
ENSPNAG00000010596	rbm38	76	69.892	ENSPANG00000020919	-	79	91.667	Papio_anubis
ENSPNAG00000010596	rbm38	82	72.589	ENSPKIG00000025417	rbm38	99	63.180	Paramormyrops_kingsleyae
ENSPNAG00000010596	rbm38	100	65.966	ENSPKIG00000018122	-	99	86.207	Paramormyrops_kingsleyae
ENSPNAG00000010596	rbm38	91	65.297	ENSPSIG00000011649	RBM38	90	65.297	Pelodiscus_sinensis
ENSPNAG00000010596	rbm38	96	65.401	ENSPMGG00000017094	-	96	67.089	Periophthalmus_magnuspinnatus
ENSPNAG00000010596	rbm38	95	61.603	ENSPMGG00000011343	rbm38	95	62.025	Periophthalmus_magnuspinnatus
ENSPNAG00000010596	rbm38	97	63.636	ENSPCIG00000013648	RBM38	92	63.636	Phascolarctos_cinereus
ENSPNAG00000010596	rbm38	98	58.506	ENSPFOG00000011658	rbm38	94	59.184	Poecilia_formosa
ENSPNAG00000010596	rbm38	98	58.506	ENSPLAG00000005218	rbm38	94	59.184	Poecilia_latipinna
ENSPNAG00000010596	rbm38	82	76.020	ENSPLAG00000002500	-	80	76.020	Poecilia_latipinna
ENSPNAG00000010596	rbm38	82	64.532	ENSPMEG00000015770	rbm38	94	59.184	Poecilia_mexicana
ENSPNAG00000010596	rbm38	98	58.506	ENSPREG00000007398	rbm38	94	59.184	Poecilia_reticulata
ENSPNAG00000010596	rbm38	88	65.258	ENSPCOG00000026201	RBM38	79	91.667	Propithecus_coquereli
ENSPNAG00000010596	rbm38	75	42.857	ENSPVAG00000006457	RBM38	76	42.857	Pteropus_vampyrus
ENSPNAG00000010596	rbm38	88	76.526	ENSPNYG00000019727	-	95	91.892	Pundamilia_nyererei
ENSPNAG00000010596	rbm38	96	60.251	ENSPNYG00000021373	rbm38	95	60.251	Pundamilia_nyererei
ENSPNAG00000010596	rbm38	88	65.258	ENSRNOG00000006420	Rbm38	85	65.258	Rattus_norvegicus
ENSPNAG00000010596	rbm38	76	56.831	ENSRROG00000036388	-	76	56.831	Rhinopithecus_roxellana
ENSPNAG00000010596	rbm38	88	65.258	ENSSBOG00000031053	RBM38	90	91.667	Saimiri_boliviensis_boliviensis
ENSPNAG00000010596	rbm38	96	66.810	ENSSFOG00015004453	rbm38	96	69.231	Scleropages_formosus
ENSPNAG00000010596	rbm38	96	61.506	ENSSDUG00000022611	rbm38	95	61.506	Seriola_dumerili
ENSPNAG00000010596	rbm38	82	79.592	ENSSDUG00000021082	RBM38	96	71.915	Seriola_dumerili
ENSPNAG00000010596	rbm38	82	80.102	ENSSLDG00000011778	RBM38	96	72.340	Seriola_lalandi_dorsalis
ENSPNAG00000010596	rbm38	96	61.506	ENSSLDG00000010845	rbm38	95	61.506	Seriola_lalandi_dorsalis
ENSPNAG00000010596	rbm38	84	66.995	ENSSPAG00000011113	rbm38	81	66.995	Stegastes_partitus
ENSPNAG00000010596	rbm38	82	79.082	ENSSPAG00000020989	RBM38	92	77.073	Stegastes_partitus
ENSPNAG00000010596	rbm38	93	62.500	ENSSSCG00000007504	RBM38	89	62.500	Sus_scrofa
ENSPNAG00000010596	rbm38	80	69.231	ENSTRUG00000024954	rbm38	80	68.687	Takifugu_rubripes
ENSPNAG00000010596	rbm38	97	68.333	ENSTRUG00000019869	-	96	69.068	Takifugu_rubripes
ENSPNAG00000010596	rbm38	88	72.727	ENSTNIG00000007093	-	92	72.727	Tetraodon_nigroviridis
ENSPNAG00000010596	rbm38	76	70.968	ENSUAMG00000019780	RBM38	85	65.728	Ursus_americanus
ENSPNAG00000010596	rbm38	93	63.839	ENSVVUG00000017246	RBM38	89	63.839	Vulpes_vulpes
ENSPNAG00000010596	rbm38	78	69.149	ENSXETG00000011268	rbm38	99	60.435	Xenopus_tropicalis
ENSPNAG00000010596	rbm38	72	71.676	ENSXCOG00000017324	-	74	71.676	Xiphophorus_couchianus
ENSPNAG00000010596	rbm38	98	59.072	ENSXMAG00000023662	rbm38	94	59.751	Xiphophorus_maculatus