EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000010678 (Gene tree)
Gene ID: 108425829
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF57.1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 9275 bases
Position: chrKV575321.1:707566-716840
Accession: 108425829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000025556	zf-C2H2	PF00096.26	5.4e-40	1	6
ENSPNAP00000025556	zf-C2H2	PF00096.26	5.4e-40	2	6
ENSPNAP00000025556	zf-C2H2	PF00096.26	5.4e-40	3	6
ENSPNAP00000025556	zf-C2H2	PF00096.26	5.4e-40	4	6
ENSPNAP00000025556	zf-C2H2	PF00096.26	5.4e-40	5	6
ENSPNAP00000025556	zf-C2H2	PF00096.26	5.4e-40	6	6
ENSPNAP00000004218	zf-C2H2	PF00096.26	1e-21	1	3
ENSPNAP00000004218	zf-C2H2	PF00096.26	1e-21	2	3
ENSPNAP00000004218	zf-C2H2	PF00096.26	1e-21	3	3
ENSPNAP00000025556	zf-met	PF12874.7	2.4e-14	1	4
ENSPNAP00000025556	zf-met	PF12874.7	2.4e-14	2	4
ENSPNAP00000025556	zf-met	PF12874.7	2.4e-14	3	4
ENSPNAP00000025556	zf-met	PF12874.7	2.4e-14	4	4
ENSPNAP00000004218	zf-met	PF12874.7	2.1e-10	1	3
ENSPNAP00000004218	zf-met	PF12874.7	2.1e-10	2	3
ENSPNAP00000004218	zf-met	PF12874.7	2.1e-10	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000007343	-	2779	XM_017694814	ENSPNAP00000025556	599 (aa)	XP_017550303	UPI0008147FC1
ENSPNAT00000007373	-	378	-	ENSPNAP00000004218	125 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000010678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000010678's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000010678	-	83	55.882	ENSPNAG00000012154	-	88	55.882
ENSPNAG00000010678	-	90	35.955	ENSPNAG00000004042	si:ch211-166g5.4	82	37.600
ENSPNAG00000010678	-	90	56.989	ENSPNAG00000006039	-	86	56.989
ENSPNAG00000010678	-	94	54.930	ENSPNAG00000005857	-	85	54.444
ENSPNAG00000010678	-	86	51.087	ENSPNAG00000009741	-	55	51.087
ENSPNAG00000010678	-	88	55.556	ENSPNAG00000002209	-	91	55.556
ENSPNAG00000010678	-	94	50.000	ENSPNAG00000017138	znf236	91	49.462
ENSPNAG00000010678	-	74	48.913	ENSPNAG00000010850	-	84	48.913
ENSPNAG00000010678	-	99	41.727	ENSPNAG00000011660	-	99	41.727
ENSPNAG00000010678	-	65	30.847	ENSPNAG00000000750	znf646	71	30.833
ENSPNAG00000010678	-	88	50.980	ENSPNAG00000006821	-	91	50.980
ENSPNAG00000010678	-	88	52.688	ENSPNAG00000003702	-	85	52.688
ENSPNAG00000010678	-	86	56.566	ENSPNAG00000019338	-	92	56.566
ENSPNAG00000010678	-	96	36.842	ENSPNAG00000016198	ovol1b	72	37.363
ENSPNAG00000010678	-	90	51.402	ENSPNAG00000014492	-	89	51.402
ENSPNAG00000010678	-	93	55.128	ENSPNAG00000000783	-	87	55.128
ENSPNAG00000010678	-	79	60.204	ENSPNAG00000021765	-	92	60.204
ENSPNAG00000010678	-	63	39.437	ENSPNAG00000027880	-	62	33.803
ENSPNAG00000010678	-	94	58.242	ENSPNAG00000010752	-	86	50.538
ENSPNAG00000010678	-	90	57.426	ENSPNAG00000021075	-	95	57.426
ENSPNAG00000010678	-	80	55.435	ENSPNAG00000029997	-	82	55.435
ENSPNAG00000010678	-	86	55.128	ENSPNAG00000017479	-	90	55.128
ENSPNAG00000010678	-	86	58.586	ENSPNAG00000008480	-	89	58.586
ENSPNAG00000010678	-	89	45.545	ENSPNAG00000026181	prdm5	82	32.344
ENSPNAG00000010678	-	79	55.556	ENSPNAG00000018437	-	73	55.556
ENSPNAG00000010678	-	87	56.000	ENSPNAG00000002244	-	83	56.000
ENSPNAG00000010678	-	83	58.462	ENSPNAG00000012495	-	78	58.462
ENSPNAG00000010678	-	88	51.613	ENSPNAG00000007266	-	99	51.613
ENSPNAG00000010678	-	82	49.351	ENSPNAG00000007265	-	87	47.826
ENSPNAG00000010678	-	79	55.102	ENSPNAG00000010317	-	81	55.102
ENSPNAG00000010678	-	82	56.667	ENSPNAG00000012206	-	92	56.667
ENSPNAG00000010678	-	90	41.860	ENSPNAG00000021863	-	92	41.860
ENSPNAG00000010678	-	79	52.688	ENSPNAG00000018409	-	94	47.445
ENSPNAG00000010678	-	89	38.667	ENSPNAG00000015896	snai2	52	37.500
ENSPNAG00000010678	-	74	55.738	ENSPNAG00000027916	-	82	56.000
ENSPNAG00000010678	-	83	57.609	ENSPNAG00000016045	-	68	57.609
ENSPNAG00000010678	-	87	59.184	ENSPNAG00000012366	-	89	59.184
ENSPNAG00000010678	-	89	48.235	ENSPNAG00000004318	zbtb47a	61	48.235
ENSPNAG00000010678	-	83	60.870	ENSPNAG00000015116	-	66	60.870
ENSPNAG00000010678	-	94	56.566	ENSPNAG00000005914	-	73	56.566
ENSPNAG00000010678	-	83	57.407	ENSPNAG00000007237	-	88	43.137
ENSPNAG00000010678	-	66	40.845	ENSPNAG00000017415	scrt1a	57	33.803
ENSPNAG00000010678	-	83	54.545	ENSPNAG00000016025	-	89	54.545
ENSPNAG00000010678	-	84	55.435	ENSPNAG00000021942	-	91	55.435
ENSPNAG00000010678	-	86	56.410	ENSPNAG00000028765	-	80	56.410
ENSPNAG00000010678	-	92	56.989	ENSPNAG00000003919	-	98	56.989
ENSPNAG00000010678	-	86	39.560	ENSPNAG00000024123	snai1b	53	39.130
ENSPNAG00000010678	-	80	43.820	ENSPNAG00000005946	-	89	43.820
ENSPNAG00000010678	-	89	44.444	ENSPNAG00000023191	-	60	44.444
ENSPNAG00000010678	-	79	55.128	ENSPNAG00000011625	-	81	55.128
ENSPNAG00000010678	-	86	54.348	ENSPNAG00000025882	-	62	54.348
ENSPNAG00000010678	-	83	52.336	ENSPNAG00000012138	-	94	52.336
ENSPNAG00000010678	-	90	52.525	ENSPNAG00000000219	-	85	52.525
ENSPNAG00000010678	-	81	49.438	ENSPNAG00000015513	si:dkey-210j14.3	91	49.438
ENSPNAG00000010678	-	87	47.826	ENSPNAG00000025570	-	81	47.826
ENSPNAG00000010678	-	82	53.261	ENSPNAG00000000303	-	66	53.261
ENSPNAG00000010678	-	86	55.556	ENSPNAG00000024704	-	86	55.556
ENSPNAG00000010678	-	87	53.763	ENSPNAG00000000066	-	78	53.763
ENSPNAG00000010678	-	84	56.989	ENSPNAG00000008653	-	96	56.989
ENSPNAG00000010678	-	91	52.941	ENSPNAG00000009164	-	83	52.941
ENSPNAG00000010678	-	88	50.538	ENSPNAG00000029386	-	83	50.538
ENSPNAG00000010678	-	79	57.609	ENSPNAG00000016478	-	98	57.609
ENSPNAG00000010678	-	85	41.304	ENSPNAG00000001150	znf648	58	37.589
ENSPNAG00000010678	-	90	46.667	ENSPNAG00000006535	znf319b	76	46.667
ENSPNAG00000010678	-	86	38.318	ENSPNAG00000021304	PRDM15	56	37.079
ENSPNAG00000010678	-	81	56.250	ENSPNAG00000008491	-	83	47.872
ENSPNAG00000010678	-	87	47.368	ENSPNAG00000020571	znf526	65	41.304
ENSPNAG00000010678	-	74	57.143	ENSPNAG00000027676	-	88	57.143
ENSPNAG00000010678	-	86	54.348	ENSPNAG00000003017	-	87	54.348
ENSPNAG00000010678	-	95	42.424	ENSPNAG00000021118	gfi1b	53	39.259
ENSPNAG00000010678	-	94	58.696	ENSPNAG00000018471	-	84	58.696
ENSPNAG00000010678	-	86	57.576	ENSPNAG00000002287	-	80	57.576
ENSPNAG00000010678	-	88	43.564	ENSPNAG00000028014	GFI1	56	42.241
ENSPNAG00000010678	-	79	52.525	ENSPNAG00000009184	-	81	52.525
ENSPNAG00000010678	-	84	53.535	ENSPNAG00000017468	-	89	53.535
ENSPNAG00000010678	-	87	60.000	ENSPNAG00000000088	-	85	60.000
ENSPNAG00000010678	-	87	52.525	ENSPNAG00000009176	-	87	52.525
ENSPNAG00000010678	-	86	53.922	ENSPNAG00000018644	-	93	53.922
ENSPNAG00000010678	-	86	56.122	ENSPNAG00000018395	-	59	56.122
ENSPNAG00000010678	-	84	56.566	ENSPNAG00000007072	-	88	56.566
ENSPNAG00000010678	-	79	59.184	ENSPNAG00000015131	-	85	59.184
ENSPNAG00000010678	-	83	55.435	ENSPNAG00000019534	-	85	55.435
ENSPNAG00000010678	-	84	53.012	ENSPNAG00000017455	-	76	53.012
ENSPNAG00000010678	-	86	48.936	ENSPNAG00000025211	-	73	30.462
ENSPNAG00000010678	-	94	52.688	ENSPNAG00000012215	-	85	52.688
ENSPNAG00000010678	-	86	59.375	ENSPNAG00000003526	-	82	59.375
ENSPNAG00000010678	-	63	32.800	ENSPNAG00000024689	wu:fe05a04	57	32.800
ENSPNAG00000010678	-	93	58.163	ENSPNAG00000005829	-	87	58.163
ENSPNAG00000010678	-	91	44.444	ENSPNAG00000000488	-	97	44.444
ENSPNAG00000010678	-	93	58.586	ENSPNAG00000021831	-	84	58.586
ENSPNAG00000010678	-	90	43.548	ENSPNAG00000014299	-	57	40.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000010678	-	85	50.538	ENSEBUG00000014667	-	74	50.538	Eptatretus_burgeri
ENSPNAG00000010678	-	92	48.454	ENSELUG00000002844	-	69	37.745	Esox_lucius
ENSPNAG00000010678	-	85	52.632	ENSFHEG00000011378	-	96	52.632	Fundulus_heteroclitus
ENSPNAG00000010678	-	87	56.044	ENSIPUG00000007076	-	99	39.726	Ictalurus_punctatus
ENSPNAG00000010678	-	92	49.515	ENSKMAG00000012934	-	87	33.333	Kryptolebias_marmoratus
ENSPNAG00000010678	-	88	47.619	ENSMMOG00000011221	-	90	47.619	Mola_mola
ENSPNAG00000010678	-	86	47.312	ENSOANG00000010666	-	71	47.312	Ornithorhynchus_anatinus
ENSPNAG00000010678	-	87	54.286	ENSPLAG00000023496	-	97	37.850	Poecilia_latipinna
ENSPNAG00000010678	-	84	64.706	ENSPMEG00000014109	-	77	64.706	Poecilia_mexicana
ENSPNAG00000010678	-	92	54.167	ENSPNYG00000022227	-	54	35.112	Pundamilia_nyererei
ENSPNAG00000010678	-	88	49.462	ENSTRUG00000000995	-	70	49.462	Takifugu_rubripes