EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000010857 (Gene tree)
Gene ID: 108435365
Gene Symbol: rabl6b
Alias: si:ch211-102c2.5
Full Name: rab-like protein 6
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 31520 bases
Position: chrKV575466.1:750024-781543
Accession: 108435365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000004307	MMR_HSR1	PF01926.23	2.5e-05	1	1
ENSPNAP00000025628	MMR_HSR1	PF01926.23	3e-05	1	1
ENSPNAP00000025645	MMR_HSR1	PF01926.23	7.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000007117	-	7575	XM_017711167	ENSPNAP00000025645	759 (aa)	XP_017566656	-
ENSPNAT00000007232	-	2094	-	ENSPNAP00000004307	697 (aa)	-	-
ENSPNAT00000007137	-	7545	XM_017711169	ENSPNAP00000025628	749 (aa)	XP_017566658	-

Gene Model

Click here to download ENSPNAG00000010857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000010857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000010857	rabl6b	100	59.600	ENSACIG00000010721	rabl6b	89	59.046	Amphilophus_citrinellus
ENSPNAG00000010857	rabl6b	100	61.074	ENSATEG00000012055	rabl6b	100	58.792	Anabas_testudineus
ENSPNAG00000010857	rabl6b	86	87.616	ENSAMXG00000038771	rabl6b	100	66.577	Astyanax_mexicanus
ENSPNAG00000010857	rabl6b	100	56.053	ENSCSEG00000016135	rabl6b	96	52.412	Cynoglossus_semilaevis
ENSPNAG00000010857	rabl6b	93	60.169	ENSCSEG00000012430	-	96	57.514	Cynoglossus_semilaevis
ENSPNAG00000010857	rabl6b	93	70.655	ENSDARG00000077653	rabl6b	99	71.449	Danio_rerio
ENSPNAG00000010857	rabl6b	100	59.307	ENSELUG00000004448	rabl6b	91	73.020	Esox_lucius
ENSPNAG00000010857	rabl6b	100	64.124	ENSGAFG00000013561	rabl6b	97	70.575	Gambusia_affinis
ENSPNAG00000010857	rabl6b	100	60.956	ENSGACG00000005242	rabl6b	89	64.183	Gasterosteus_aculeatus
ENSPNAG00000010857	rabl6b	92	65.335	ENSHBUG00000014235	rabl6b	90	65.084	Haplochromis_burtoni
ENSPNAG00000010857	rabl6b	100	69.481	ENSIPUG00000019266	rabl6	100	68.366	Ictalurus_punctatus
ENSPNAG00000010857	rabl6b	88	55.060	ENSLOCG00000001402	rabl6b	79	88.980	Lepisosteus_oculatus
ENSPNAG00000010857	rabl6b	100	60.952	ENSMAMG00000019516	rabl6b	100	58.943	Mastacembelus_armatus
ENSPNAG00000010857	rabl6b	63	61.506	ENSMZEG00005003942	rabl6b	98	57.613	Maylandia_zebra
ENSPNAG00000010857	rabl6b	61	67.051	ENSMMOG00000009459	rabl6b	94	57.741	Mola_mola
ENSPNAG00000010857	rabl6b	100	61.170	ENSMALG00000002029	rabl6b	90	62.826	Monopterus_albus
ENSPNAG00000010857	rabl6b	64	59.714	ENSNBRG00000012512	rabl6b	98	56.212	Neolamprologus_brichardi
ENSPNAG00000010857	rabl6b	100	59.753	ENSORLG00020017557	rabl6b	100	60.111	Oryzias_latipes_hni
ENSPNAG00000010857	rabl6b	96	63.686	ENSORLG00015007848	rabl6b	89	72.639	Oryzias_latipes_hsok
ENSPNAG00000010857	rabl6b	93	57.708	ENSPCIG00000023722	RABL6	92	58.719	Phascolarctos_cinereus
ENSPNAG00000010857	rabl6b	92	65.007	ENSPFOG00000003250	rabl6b	90	64.326	Poecilia_formosa
ENSPNAG00000010857	rabl6b	92	65.149	ENSPLAG00000019562	rabl6b	90	64.466	Poecilia_latipinna
ENSPNAG00000010857	rabl6b	92	65.149	ENSPMEG00000020472	rabl6b	90	64.466	Poecilia_mexicana
ENSPNAG00000010857	rabl6b	94	65.871	ENSPREG00000014116	rabl6b	95	63.950	Poecilia_reticulata
ENSPNAG00000010857	rabl6b	99	60.186	ENSSFOG00015013414	-	89	60.534	Scleropages_formosus
ENSPNAG00000010857	rabl6b	100	59.841	ENSSPAG00000021033	rabl6b	96	63.611	Stegastes_partitus
ENSPNAG00000010857	rabl6b	96	61.769	ENSTNIG00000010595	rabl6b	95	61.964	Tetraodon_nigroviridis