EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000010889 (Gene tree)
Gene ID: 108414329
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 27098 bases
Position: chrKV575298.1:6034289-6061386
Accession: 108414329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000004413	PAM2	PF07145.15	3.9e-06	1	1
ENSPNAP00000025700	PAM2	PF07145.15	3.9e-06	1	1
ENSPNAP00000025690	PAM2	PF07145.15	3.9e-06	1	1
ENSPNAP00000004413	LsmAD	PF06741.13	5.1e-16	1	1
ENSPNAP00000025690	LsmAD	PF06741.13	5.2e-16	1	1
ENSPNAP00000025700	LsmAD	PF06741.13	5.3e-16	1	1
ENSPNAP00000004413	SM-ATX	PF14438.6	3.8e-20	1	1
ENSPNAP00000025690	SM-ATX	PF14438.6	3.8e-20	1	1
ENSPNAP00000025700	SM-ATX	PF14438.6	4.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000007023	-	4180	XM_017687197	ENSPNAP00000025700	1038 (aa)	XP_017542686	-
ENSPNAT00000007050	-	4177	XM_017687203	ENSPNAP00000004413	1037 (aa)	XP_017542692	-
ENSPNAT00000006996	-	4195	XM_017687182	ENSPNAP00000025690	1043 (aa)	XP_017542671	UPI0008148610

Gene Model

Click here to download ENSPNAG00000010889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000010889's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000010889	atxn2	99	34.968	ENSPNAG00000014538	atxn2l	99	36.330

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000010889	atxn2	99	74.476	ENSAPOG00000014663	atxn2	100	76.727	Acanthochromis_polyacanthus
ENSPNAG00000010889	atxn2	99	74.432	ENSAOCG00000001107	atxn2	100	76.764	Amphiprion_ocellaris
ENSPNAG00000010889	atxn2	99	74.335	ENSAPEG00000020250	atxn2	100	76.460	Amphiprion_percula
ENSPNAG00000010889	atxn2	99	88.383	ENSAMXG00000002342	atxn2	100	87.657	Astyanax_mexicanus
ENSPNAG00000010889	atxn2	88	70.569	ENSBTAG00000022069	ATXN2	76	54.676	Bos_taurus
ENSPNAG00000010889	atxn2	73	79.130	ENSCAPG00000013332	ATXN2	83	79.130	Cavia_aperea
ENSPNAG00000010889	atxn2	95	54.775	ENSCATG00000017877	ATXN2	87	55.463	Cercocebus_atys
ENSPNAG00000010889	atxn2	74	64.929	ENSCHOG00000004284	ATXN2	77	64.929	Choloepus_hoffmanni
ENSPNAG00000010889	atxn2	94	60.725	ENSCPBG00000003465	ATXN2	100	61.019	Chrysemys_picta_bellii
ENSPNAG00000010889	atxn2	100	69.557	ENSCSEG00000009072	-	100	70.161	Cynoglossus_semilaevis
ENSPNAG00000010889	atxn2	100	70.245	ENSCSEG00000018366	atxn2	100	71.563	Cynoglossus_semilaevis
ENSPNAG00000010889	atxn2	97	72.222	ENSCVAG00000020160	atxn2	100	72.693	Cyprinodon_variegatus
ENSPNAG00000010889	atxn2	88	70.764	ENSEASG00005012077	ATXN2	99	60.780	Equus_asinus_asinus
ENSPNAG00000010889	atxn2	74	69.935	ENSEEUG00000014635	-	70	69.935	Erinaceus_europaeus
ENSPNAG00000010889	atxn2	99	69.524	ENSELUG00000019632	atxn2	99	69.677	Esox_lucius
ENSPNAG00000010889	atxn2	91	72.199	ENSFHEG00000019561	atxn2	98	72.518	Fundulus_heteroclitus
ENSPNAG00000010889	atxn2	66	82.353	ENSGMOG00000007412	atxn2	65	82.414	Gadus_morhua
ENSPNAG00000010889	atxn2	94	82.353	ENSGAFG00000003302	atxn2	99	72.934	Gambusia_affinis
ENSPNAG00000010889	atxn2	94	61.416	ENSGAGG00000005014	ATXN2	100	61.416	Gopherus_agassizii
ENSPNAG00000010889	atxn2	99	72.945	ENSHBUG00000002921	atxn2	100	74.929	Haplochromis_burtoni
ENSPNAG00000010889	atxn2	99	70.263	ENSHCOG00000005278	atxn2	96	70.977	Hippocampus_comes
ENSPNAG00000010889	atxn2	100	78.843	ENSIPUG00000016649	atxn2	100	78.897	Ictalurus_punctatus
ENSPNAG00000010889	atxn2	67	55.337	ENSSTOG00000000978	ATXN2	100	55.402	Ictidomys_tridecemlineatus
ENSPNAG00000010889	atxn2	100	72.505	ENSKMAG00000000980	atxn2	100	74.412	Kryptolebias_marmoratus
ENSPNAG00000010889	atxn2	59	66.935	ENSLBEG00000017484	atxn2	96	67.949	Labrus_bergylta
ENSPNAG00000010889	atxn2	99	72.856	ENSLOCG00000007880	atxn2	99	73.088	Lepisosteus_oculatus
ENSPNAG00000010889	atxn2	66	55.807	ENSLAFG00000007416	ATXN2	100	55.177	Loxodonta_africana
ENSPNAG00000010889	atxn2	99	73.359	ENSMAMG00000019160	atxn2	98	75.167	Mastacembelus_armatus
ENSPNAG00000010889	atxn2	99	72.693	ENSMZEG00005008476	atxn2	100	74.578	Maylandia_zebra
ENSPNAG00000010889	atxn2	66	55.874	ENSMAUG00000008223	-	100	54.806	Mesocricetus_auratus
ENSPNAG00000010889	atxn2	58	55.974	ENSMICG00000013541	ATXN2	99	55.916	Microcebus_murinus
ENSPNAG00000010889	atxn2	66	56.160	ENSMOCG00000005219	Atxn2	100	55.667	Microtus_ochrogaster
ENSPNAG00000010889	atxn2	93	82.143	ENSMMOG00000013189	atxn2	93	82.143	Mola_mola
ENSPNAG00000010889	atxn2	99	72.727	ENSMALG00000018529	atxn2	99	73.755	Monopterus_albus
ENSPNAG00000010889	atxn2	66	56.160	ENSMUSG00000042605	Atxn2	100	54.806	Mus_musculus
ENSPNAG00000010889	atxn2	87	69.892	MGP_PahariEiJ_G0024272	Atxn2	100	55.811	Mus_pahari
ENSPNAG00000010889	atxn2	66	56.304	MGP_SPRETEiJ_G0028690	Atxn2	100	55.093	Mus_spretus
ENSPNAG00000010889	atxn2	97	71.521	ENSMLUG00000015559	ATXN2	95	71.111	Myotis_lucifugus
ENSPNAG00000010889	atxn2	93	83.929	ENSNBRG00000015794	atxn2	92	83.929	Neolamprologus_brichardi
ENSPNAG00000010889	atxn2	82	72.785	ENSMEUG00000012244	-	80	72.727	Notamacropus_eugenii
ENSPNAG00000010889	atxn2	95	61.905	ENSOPRG00000014599	ATXN2	95	61.667	Ochotona_princeps
ENSPNAG00000010889	atxn2	97	69.329	ENSOCUG00000002855	ATXN2	67	68.966	Oryctolagus_cuniculus
ENSPNAG00000010889	atxn2	98	72.464	ENSORLG00000003606	atxn2	99	72.306	Oryzias_latipes
ENSPNAG00000010889	atxn2	99	70.124	ENSORLG00020000785	atxn2	99	70.433	Oryzias_latipes_hni
ENSPNAG00000010889	atxn2	99	70.293	ENSORLG00015012345	atxn2	99	71.186	Oryzias_latipes_hsok
ENSPNAG00000010889	atxn2	99	70.644	ENSOMEG00000020080	atxn2	97	73.197	Oryzias_melastigma
ENSPNAG00000010889	atxn2	100	74.858	ENSPKIG00000023134	atxn2	100	74.500	Paramormyrops_kingsleyae
ENSPNAG00000010889	atxn2	94	82.500	ENSPMGG00000005074	atxn2	94	82.500	Periophthalmus_magnuspinnatus
ENSPNAG00000010889	atxn2	66	56.447	ENSPEMG00000015340	Atxn2	100	55.237	Peromyscus_maniculatus_bairdii
ENSPNAG00000010889	atxn2	55	59.114	ENSPCIG00000006165	-	94	56.061	Phascolarctos_cinereus
ENSPNAG00000010889	atxn2	97	73.725	ENSPLAG00000015241	atxn2	100	73.954	Poecilia_latipinna
ENSPNAG00000010889	atxn2	97	74.510	ENSPMEG00000016681	atxn2	100	74.381	Poecilia_mexicana
ENSPNAG00000010889	atxn2	97	74.197	ENSPREG00000014825	atxn2	100	74.127	Poecilia_reticulata
ENSPNAG00000010889	atxn2	56	79.688	ENSPCAG00000004216	-	51	55.780	Procavia_capensis
ENSPNAG00000010889	atxn2	96	70.957	ENSPVAG00000013179	ATXN2	77	70.440	Pteropus_vampyrus
ENSPNAG00000010889	atxn2	51	73.731	ENSPNYG00000016981	atxn2	93	75.901	Pundamilia_nyererei
ENSPNAG00000010889	atxn2	94	79.715	ENSSFOG00015017229	atxn2	94	78.322	Scleropages_formosus
ENSPNAG00000010889	atxn2	99	72.624	ENSSMAG00000004627	atxn2	100	75.377	Scophthalmus_maximus
ENSPNAG00000010889	atxn2	100	72.130	ENSSDUG00000001223	atxn2	100	74.884	Seriola_dumerili
ENSPNAG00000010889	atxn2	69	69.136	ENSSARG00000006291	ATXN2	68	69.136	Sorex_araneus
ENSPNAG00000010889	atxn2	95	68.667	ENSSPUG00000010317	ATXN2	87	68.301	Sphenodon_punctatus
ENSPNAG00000010889	atxn2	99	74.049	ENSSPAG00000000377	atxn2	98	76.504	Stegastes_partitus
ENSPNAG00000010889	atxn2	96	61.388	ENSSSCG00000009834	ATXN2	94	60.794	Sus_scrofa
ENSPNAG00000010889	atxn2	96	59.151	ENSTGUG00000006497	ATXN2	100	59.322	Taeniopygia_guttata
ENSPNAG00000010889	atxn2	99	77.419	ENSTRUG00000016801	atxn2	91	79.487	Takifugu_rubripes
ENSPNAG00000010889	atxn2	79	70.000	ENSTBEG00000001985	ATXN2	84	70.000	Tupaia_belangeri
ENSPNAG00000010889	atxn2	84	68.227	ENSTTRG00000000952	ATXN2	72	67.949	Tursiops_truncatus
ENSPNAG00000010889	atxn2	95	67.881	ENSXETG00000020912	atxn2	100	45.446	Xenopus_tropicalis
ENSPNAG00000010889	atxn2	59	66.132	ENSXCOG00000010001	atxn2	99	67.851	Xiphophorus_couchianus
ENSPNAG00000010889	atxn2	97	73.679	ENSXMAG00000003481	atxn2	100	74.008	Xiphophorus_maculatus