EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000010956 (Gene tree)
Gene ID: 108426318
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 35782 bases
Position: chrKV575326.1:3001430-3037211
Accession: 108426318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000004521	XRN_N	PF03159.18	2.6e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000006871	-	5132	XM_017695714	ENSPNAP00000004521	973 (aa)	XP_017551203	UPI0008147469

Gene Model

Click here to download ENSPNAG00000010956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000010956's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000010956	xrn2	99	71.633	ENSG00000088930	XRN2	100	71.633	Homo_sapiens
ENSPNAG00000010956	xrn2	96	79.936	ENSAPOG00000009818	xrn2	100	78.305	Acanthochromis_polyacanthus
ENSPNAG00000010956	xrn2	99	71.093	ENSAMEG00000012581	XRN2	100	71.093	Ailuropoda_melanoleuca
ENSPNAG00000010956	xrn2	91	78.716	ENSACIG00000015047	xrn2	95	83.302	Amphilophus_citrinellus
ENSPNAG00000010956	xrn2	96	80.192	ENSAOCG00000023632	xrn2	100	78.687	Amphiprion_ocellaris
ENSPNAG00000010956	xrn2	96	80.573	ENSAPEG00000014871	xrn2	100	78.607	Amphiprion_percula
ENSPNAG00000010956	xrn2	95	81.525	ENSATEG00000001273	xrn2	99	80.435	Anabas_testudineus
ENSPNAG00000010956	xrn2	97	71.144	ENSAPLG00000013869	XRN2	100	71.144	Anas_platyrhynchos
ENSPNAG00000010956	xrn2	99	70.142	ENSACAG00000005565	XRN2	100	70.142	Anolis_carolinensis
ENSPNAG00000010956	xrn2	99	71.327	ENSANAG00000020126	XRN2	100	71.327	Aotus_nancymaae
ENSPNAG00000010956	xrn2	91	79.438	ENSACLG00000010522	xrn2	98	79.438	Astatotilapia_calliptera
ENSPNAG00000010956	xrn2	99	91.255	ENSAMXG00000018301	xrn2	100	91.255	Astyanax_mexicanus
ENSPNAG00000010956	xrn2	99	70.438	ENSBTAG00000011304	XRN2	100	70.438	Bos_taurus
ENSPNAG00000010956	xrn2	86	54.335	WBGene00006964	xrn-2	98	50.748	Caenorhabditis_elegans
ENSPNAG00000010956	xrn2	99	71.327	ENSCJAG00000005611	XRN2	100	71.327	Callithrix_jacchus
ENSPNAG00000010956	xrn2	99	71.224	ENSCAFG00000005185	XRN2	100	71.224	Canis_familiaris
ENSPNAG00000010956	xrn2	99	71.224	ENSCAFG00020027479	XRN2	100	71.224	Canis_lupus_dingo
ENSPNAG00000010956	xrn2	99	70.744	ENSCHIG00000006921	XRN2	100	70.744	Capra_hircus
ENSPNAG00000010956	xrn2	99	70.612	ENSTSYG00000008315	XRN2	100	70.612	Carlito_syrichta
ENSPNAG00000010956	xrn2	97	59.917	ENSCAPG00000010773	XRN2	99	59.298	Cavia_aperea
ENSPNAG00000010956	xrn2	99	71.531	ENSCPOG00000009407	XRN2	100	71.531	Cavia_porcellus
ENSPNAG00000010956	xrn2	99	71.429	ENSCATG00000040350	XRN2	100	71.429	Cercocebus_atys
ENSPNAG00000010956	xrn2	99	71.865	ENSCLAG00000013419	XRN2	100	71.865	Chinchilla_lanigera
ENSPNAG00000010956	xrn2	99	71.429	ENSCSAG00000011094	XRN2	100	71.429	Chlorocebus_sabaeus
ENSPNAG00000010956	xrn2	66	88.710	ENSCHOG00000013404	XRN2	69	88.710	Choloepus_hoffmanni
ENSPNAG00000010956	xrn2	99	71.865	ENSCPBG00000023533	XRN2	100	71.996	Chrysemys_picta_bellii
ENSPNAG00000010956	xrn2	85	59.150	ENSCING00000022336	-	100	59.929	Ciona_intestinalis
ENSPNAG00000010956	xrn2	80	69.070	ENSCSAVG00000011217	-	92	69.880	Ciona_savignyi
ENSPNAG00000010956	xrn2	99	71.429	ENSCANG00000040240	XRN2	100	71.429	Colobus_angolensis_palliatus
ENSPNAG00000010956	xrn2	98	71.830	ENSCGRG00001010676	Xrn2	100	72.245	Cricetulus_griseus_chok1gshd
ENSPNAG00000010956	xrn2	97	70.397	ENSCGRG00000006378	Xrn2	99	70.816	Cricetulus_griseus_crigri
ENSPNAG00000010956	xrn2	54	77.351	ENSCSEG00000005628	xrn2	100	76.583	Cynoglossus_semilaevis
ENSPNAG00000010956	xrn2	90	78.965	ENSCVAG00000018999	xrn2	98	85.878	Cyprinodon_variegatus
ENSPNAG00000010956	xrn2	99	80.757	ENSDARG00000101900	xrn2	96	88.168	Danio_rerio
ENSPNAG00000010956	xrn2	99	71.531	ENSDNOG00000001895	XRN2	100	71.531	Dasypus_novemcinctus
ENSPNAG00000010956	xrn2	99	70.510	ENSDORG00000005434	Xrn2	100	70.510	Dipodomys_ordii
ENSPNAG00000010956	xrn2	85	55.222	FBgn0031868	Rat1	88	54.911	Drosophila_melanogaster
ENSPNAG00000010956	xrn2	91	81.509	ENSETEG00000001740	XRN2	92	81.509	Echinops_telfairi
ENSPNAG00000010956	xrn2	83	70.995	ENSEBUG00000016136	xrn2	100	70.995	Eptatretus_burgeri
ENSPNAG00000010956	xrn2	99	71.531	ENSEASG00005002484	XRN2	100	71.531	Equus_asinus_asinus
ENSPNAG00000010956	xrn2	94	96.154	ENSECAG00000018988	XRN2	96	96.154	Equus_caballus
ENSPNAG00000010956	xrn2	66	100.000	ENSEEUG00000009265	XRN2	67	100.000	Erinaceus_europaeus
ENSPNAG00000010956	xrn2	99	79.459	ENSELUG00000000552	xrn2	100	80.561	Esox_lucius
ENSPNAG00000010956	xrn2	99	71.122	ENSFCAG00000007970	XRN2	100	71.122	Felis_catus
ENSPNAG00000010956	xrn2	99	71.181	ENSFALG00000004508	XRN2	100	71.181	Ficedula_albicollis
ENSPNAG00000010956	xrn2	99	71.429	ENSFDAG00000016311	XRN2	100	71.429	Fukomys_damarensis
ENSPNAG00000010956	xrn2	54	78.011	ENSFHEG00000013039	xrn2	98	78.011	Fundulus_heteroclitus
ENSPNAG00000010956	xrn2	85	80.312	ENSGMOG00000013436	xrn2	100	80.312	Gadus_morhua
ENSPNAG00000010956	xrn2	99	71.238	ENSGALG00000008372	XRN2	100	71.238	Gallus_gallus
ENSPNAG00000010956	xrn2	89	81.724	ENSGAFG00000014284	xrn2	98	81.724	Gambusia_affinis
ENSPNAG00000010956	xrn2	86	80.357	ENSGACG00000011870	xrn2	96	85.029	Gasterosteus_aculeatus
ENSPNAG00000010956	xrn2	99	71.865	ENSGAGG00000004884	XRN2	100	71.894	Gopherus_agassizii
ENSPNAG00000010956	xrn2	99	71.429	ENSGGOG00000013738	XRN2	100	71.429	Gorilla_gorilla
ENSPNAG00000010956	xrn2	54	82.218	ENSHBUG00000005077	xrn2	94	82.218	Haplochromis_burtoni
ENSPNAG00000010956	xrn2	99	70.816	ENSHGLG00000014831	XRN2	100	70.816	Heterocephalus_glaber_female
ENSPNAG00000010956	xrn2	99	70.816	ENSHGLG00100013130	XRN2	100	70.816	Heterocephalus_glaber_male
ENSPNAG00000010956	xrn2	99	75.651	ENSHCOG00000011994	xrn2	99	76.076	Hippocampus_comes
ENSPNAG00000010956	xrn2	99	85.934	ENSIPUG00000006639	xrn2	100	85.934	Ictalurus_punctatus
ENSPNAG00000010956	xrn2	99	71.429	ENSSTOG00000000589	XRN2	100	71.429	Ictidomys_tridecemlineatus
ENSPNAG00000010956	xrn2	99	71.764	ENSJJAG00000022128	Xrn2	100	71.764	Jaculus_jaculus
ENSPNAG00000010956	xrn2	54	85.057	ENSLBEG00000010041	xrn2	100	85.057	Labrus_bergylta
ENSPNAG00000010956	xrn2	94	70.455	ENSLACG00000008307	XRN2	97	75.400	Latimeria_chalumnae
ENSPNAG00000010956	xrn2	99	74.719	ENSLOCG00000016874	xrn2	93	81.784	Lepisosteus_oculatus
ENSPNAG00000010956	xrn2	99	71.735	ENSLAFG00000014624	XRN2	100	71.735	Loxodonta_africana
ENSPNAG00000010956	xrn2	99	71.429	ENSMFAG00000038122	XRN2	100	71.429	Macaca_fascicularis
ENSPNAG00000010956	xrn2	99	71.429	ENSMMUG00000011405	XRN2	100	71.429	Macaca_mulatta
ENSPNAG00000010956	xrn2	99	71.327	ENSMNEG00000040626	XRN2	100	71.327	Macaca_nemestrina
ENSPNAG00000010956	xrn2	99	71.327	ENSMLEG00000041897	XRN2	100	71.327	Mandrillus_leucophaeus
ENSPNAG00000010956	xrn2	95	81.270	ENSMAMG00000008633	xrn2	98	79.772	Mastacembelus_armatus
ENSPNAG00000010956	xrn2	91	81.348	ENSMZEG00005022362	xrn2	98	81.348	Maylandia_zebra
ENSPNAG00000010956	xrn2	99	70.265	ENSMGAG00000003196	XRN2	99	70.265	Meleagris_gallopavo
ENSPNAG00000010956	xrn2	99	72.143	ENSMAUG00000021842	Xrn2	100	72.143	Mesocricetus_auratus
ENSPNAG00000010956	xrn2	99	70.684	ENSMICG00000008126	XRN2	100	70.684	Microcebus_murinus
ENSPNAG00000010956	xrn2	99	71.399	ENSMOCG00000012588	Xrn2	100	71.502	Microtus_ochrogaster
ENSPNAG00000010956	xrn2	91	82.115	ENSMMOG00000017576	xrn2	96	83.619	Mola_mola
ENSPNAG00000010956	xrn2	99	71.502	ENSMODG00000006163	XRN2	100	71.502	Monodelphis_domestica
ENSPNAG00000010956	xrn2	95	81.775	ENSMALG00000011355	xrn2	95	86.782	Monopterus_albus
ENSPNAG00000010956	xrn2	99	71.690	MGP_CAROLIEiJ_G0024400	Xrn2	100	71.690	Mus_caroli
ENSPNAG00000010956	xrn2	99	71.792	ENSMUSG00000027433	Xrn2	100	71.792	Mus_musculus
ENSPNAG00000010956	xrn2	99	71.690	MGP_PahariEiJ_G0025843	Xrn2	100	71.690	Mus_pahari
ENSPNAG00000010956	xrn2	99	71.792	MGP_SPRETEiJ_G0025318	Xrn2	94	84.874	Mus_spretus
ENSPNAG00000010956	xrn2	99	69.910	ENSMPUG00000001198	XRN2	93	69.910	Mustela_putorius_furo
ENSPNAG00000010956	xrn2	99	71.502	ENSMLUG00000001536	XRN2	100	71.502	Myotis_lucifugus
ENSPNAG00000010956	xrn2	99	71.735	ENSNGAG00000018138	Xrn2	100	71.735	Nannospalax_galili
ENSPNAG00000010956	xrn2	91	81.573	ENSNBRG00000008062	xrn2	98	81.573	Neolamprologus_brichardi
ENSPNAG00000010956	xrn2	99	71.429	ENSNLEG00000009991	XRN2	100	71.429	Nomascus_leucogenys
ENSPNAG00000010956	xrn2	65	86.667	ENSMEUG00000008622	-	67	86.667	Notamacropus_eugenii
ENSPNAG00000010956	xrn2	66	73.684	ENSOPRG00000001397	-	68	73.684	Ochotona_princeps
ENSPNAG00000010956	xrn2	97	66.071	ENSODEG00000000860	-	99	65.756	Octodon_degus
ENSPNAG00000010956	xrn2	99	71.531	ENSODEG00000010745	-	100	71.531	Octodon_degus
ENSPNAG00000010956	xrn2	99	77.423	ENSONIG00000018720	xrn2	100	77.250	Oreochromis_niloticus
ENSPNAG00000010956	xrn2	99	71.414	ENSOANG00000015673	XRN2	100	71.414	Ornithorhynchus_anatinus
ENSPNAG00000010956	xrn2	99	71.429	ENSOCUG00000013468	XRN2	100	71.429	Oryctolagus_cuniculus
ENSPNAG00000010956	xrn2	98	79.171	ENSORLG00000017213	xrn2	96	83.372	Oryzias_latipes
ENSPNAG00000010956	xrn2	98	79.046	ENSORLG00020001824	xrn2	100	78.499	Oryzias_latipes_hni
ENSPNAG00000010956	xrn2	98	78.527	ENSORLG00015019747	xrn2	100	77.992	Oryzias_latipes_hsok
ENSPNAG00000010956	xrn2	97	77.105	ENSOMEG00000019820	xrn2	100	77.543	Oryzias_melastigma
ENSPNAG00000010956	xrn2	99	71.735	ENSOGAG00000001068	XRN2	100	71.735	Otolemur_garnettii
ENSPNAG00000010956	xrn2	97	69.811	ENSOARG00000004443	XRN2	99	69.948	Ovis_aries
ENSPNAG00000010956	xrn2	99	71.429	ENSPPAG00000033549	XRN2	100	71.429	Pan_paniscus
ENSPNAG00000010956	xrn2	99	71.122	ENSPPRG00000008732	XRN2	100	71.122	Panthera_pardus
ENSPNAG00000010956	xrn2	97	70.440	ENSPTIG00000015683	XRN2	97	70.440	Panthera_tigris_altaica
ENSPNAG00000010956	xrn2	99	71.429	ENSPTRG00000013308	XRN2	100	71.429	Pan_troglodytes
ENSPNAG00000010956	xrn2	99	71.429	ENSPANG00000018088	XRN2	100	71.429	Papio_anubis
ENSPNAG00000010956	xrn2	99	79.310	ENSPKIG00000016889	xrn2	100	79.716	Paramormyrops_kingsleyae
ENSPNAG00000010956	xrn2	80	76.795	ENSPSIG00000014666	XRN2	100	76.795	Pelodiscus_sinensis
ENSPNAG00000010956	xrn2	99	71.531	ENSPEMG00000000111	Xrn2	100	71.531	Peromyscus_maniculatus_bairdii
ENSPNAG00000010956	xrn2	100	77.033	ENSPFOG00000004182	xrn2	100	77.259	Poecilia_formosa
ENSPNAG00000010956	xrn2	90	80.449	ENSPLAG00000007351	xrn2	98	80.449	Poecilia_latipinna
ENSPNAG00000010956	xrn2	94	76.022	ENSPMEG00000011798	xrn2	100	76.262	Poecilia_mexicana
ENSPNAG00000010956	xrn2	91	80.743	ENSPREG00000012452	xrn2	98	80.580	Poecilia_reticulata
ENSPNAG00000010956	xrn2	99	71.122	ENSPPYG00000010755	XRN2	100	71.122	Pongo_abelii
ENSPNAG00000010956	xrn2	99	67.719	ENSPCAG00000011191	XRN2	100	67.719	Procavia_capensis
ENSPNAG00000010956	xrn2	99	65.373	ENSPCOG00000016468	XRN2	100	65.373	Propithecus_coquereli
ENSPNAG00000010956	xrn2	93	65.603	ENSPVAG00000004596	XRN2	93	65.603	Pteropus_vampyrus
ENSPNAG00000010956	xrn2	91	79.438	ENSPNYG00000001765	xrn2	98	79.438	Pundamilia_nyererei
ENSPNAG00000010956	xrn2	99	71.764	ENSRNOG00000011785	Xrn2	100	71.865	Rattus_norvegicus
ENSPNAG00000010956	xrn2	85	76.895	ENSRBIG00000036193	XRN2	100	76.895	Rhinopithecus_bieti
ENSPNAG00000010956	xrn2	99	71.429	ENSRROG00000044400	XRN2	90	71.429	Rhinopithecus_roxellana
ENSPNAG00000010956	xrn2	64	52.632	YOR048C	RAT1	63	53.865	Saccharomyces_cerevisiae
ENSPNAG00000010956	xrn2	99	71.429	ENSSBOG00000021014	XRN2	100	71.429	Saimiri_boliviensis_boliviensis
ENSPNAG00000010956	xrn2	99	80.326	ENSSFOG00015001091	xrn2	99	80.326	Scleropages_formosus
ENSPNAG00000010956	xrn2	92	81.564	ENSSMAG00000007834	xrn2	100	77.856	Scophthalmus_maximus
ENSPNAG00000010956	xrn2	96	77.612	ENSSDUG00000012802	xrn2	99	80.609	Seriola_dumerili
ENSPNAG00000010956	xrn2	93	82.503	ENSSLDG00000021273	xrn2	100	82.503	Seriola_lalandi_dorsalis
ENSPNAG00000010956	xrn2	70	100.000	ENSSARG00000005859	-	69	100.000	Sorex_araneus
ENSPNAG00000010956	xrn2	97	69.780	ENSSPUG00000005485	XRN2	95	69.780	Sphenodon_punctatus
ENSPNAG00000010956	xrn2	100	77.935	ENSSPAG00000016027	xrn2	99	78.543	Stegastes_partitus
ENSPNAG00000010956	xrn2	99	70.204	ENSSSCG00000007109	XRN2	100	70.204	Sus_scrofa
ENSPNAG00000010956	xrn2	99	70.102	ENSTGUG00000007535	XRN2	100	70.102	Taeniopygia_guttata
ENSPNAG00000010956	xrn2	99	74.925	ENSTRUG00000015489	xrn2	100	75.920	Takifugu_rubripes
ENSPNAG00000010956	xrn2	99	74.063	ENSTNIG00000010712	xrn2	100	74.063	Tetraodon_nigroviridis
ENSPNAG00000010956	xrn2	99	70.918	ENSTBEG00000004119	XRN2	100	71.152	Tupaia_belangeri
ENSPNAG00000010956	xrn2	93	78.207	ENSTTRG00000009087	XRN2	93	78.207	Tursiops_truncatus
ENSPNAG00000010956	xrn2	99	71.093	ENSUAMG00000024634	XRN2	100	71.093	Ursus_americanus
ENSPNAG00000010956	xrn2	97	70.409	ENSUMAG00000004012	XRN2	95	70.409	Ursus_maritimus
ENSPNAG00000010956	xrn2	81	84.790	ENSVPAG00000010694	XRN2	84	84.790	Vicugna_pacos
ENSPNAG00000010956	xrn2	99	71.327	ENSVVUG00000012178	XRN2	100	71.327	Vulpes_vulpes
ENSPNAG00000010956	xrn2	99	70.829	ENSXETG00000023501	xrn2	99	70.829	Xenopus_tropicalis
ENSPNAG00000010956	xrn2	100	77.134	ENSXMAG00000000242	xrn2	92	86.131	Xiphophorus_maculatus