EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000010998 (Gene tree)
Gene ID: 108440303
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 28943 bases
Position: chrKV575632.1:332358-361300
Accession: 108440303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000004468	ResIII	PF04851.15	1.1e-16	1	1
ENSPNAP00000004468	DEAD	PF00270.29	2.9e-35	1	2
ENSPNAP00000004468	DEAD	PF00270.29	2.9e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000006972	-	6207	XM_017719097	ENSPNAP00000004468	2068 (aa)	XP_017574586	-

Gene Model

Click here to download ENSPNAG00000010998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000010998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000010998	snrnp200	80	42.144	ENSPNAG00000016413	ascc3	92	42.424
ENSPNAG00000010998	snrnp200	66	30.454	ENSPNAG00000010865	hfm1	79	30.454

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000010998	snrnp200	99	86.096	ENSG00000144028	SNRNP200	99	90.801	Homo_sapiens
ENSPNAG00000010998	snrnp200	99	90.695	ENSAPOG00000010223	snrnp200	100	90.641	Acanthochromis_polyacanthus
ENSPNAG00000010998	snrnp200	99	86.142	ENSAMEG00000008996	SNRNP200	100	86.142	Ailuropoda_melanoleuca
ENSPNAG00000010998	snrnp200	97	89.663	ENSACIG00000001764	snrnp200	98	89.663	Amphilophus_citrinellus
ENSPNAG00000010998	snrnp200	99	90.555	ENSAOCG00000024593	snrnp200	100	90.501	Amphiprion_ocellaris
ENSPNAG00000010998	snrnp200	97	89.127	ENSAPEG00000012554	snrnp200	100	89.127	Amphiprion_percula
ENSPNAG00000010998	snrnp200	99	90.695	ENSATEG00000022522	snrnp200	100	90.641	Anabas_testudineus
ENSPNAG00000010998	snrnp200	99	85.809	ENSAPLG00000004313	SNRNP200	100	85.809	Anas_platyrhynchos
ENSPNAG00000010998	snrnp200	99	83.993	ENSACAG00000000434	SNRNP200	100	83.993	Anolis_carolinensis
ENSPNAG00000010998	snrnp200	99	82.205	ENSANAG00000036625	SNRNP200	100	82.205	Aotus_nancymaae
ENSPNAG00000010998	snrnp200	99	90.461	ENSACLG00000011188	snrnp200	100	90.407	Astatotilapia_calliptera
ENSPNAG00000010998	snrnp200	99	92.445	ENSAMXG00000005684	snrnp200	100	92.383	Astyanax_mexicanus
ENSPNAG00000010998	snrnp200	99	85.815	ENSBTAG00000000848	SNRNP200	100	85.815	Bos_taurus
ENSPNAG00000010998	snrnp200	99	86.096	ENSCJAG00000007514	SNRNP200	100	86.096	Callithrix_jacchus
ENSPNAG00000010998	snrnp200	99	87.290	ENSCAFG00020019979	SNRNP200	100	87.290	Canis_lupus_dingo
ENSPNAG00000010998	snrnp200	99	85.861	ENSCHIG00000020611	SNRNP200	100	85.861	Capra_hircus
ENSPNAG00000010998	snrnp200	99	86.142	ENSTSYG00000010467	SNRNP200	100	86.142	Carlito_syrichta
ENSPNAG00000010998	snrnp200	99	85.614	ENSCAPG00000017234	SNRNP200	99	85.614	Cavia_aperea
ENSPNAG00000010998	snrnp200	99	85.955	ENSCPOG00000006776	SNRNP200	100	85.955	Cavia_porcellus
ENSPNAG00000010998	snrnp200	99	86.096	ENSCCAG00000033962	SNRNP200	100	86.096	Cebus_capucinus
ENSPNAG00000010998	snrnp200	99	86.096	ENSCATG00000015790	SNRNP200	100	86.096	Cercocebus_atys
ENSPNAG00000010998	snrnp200	99	85.908	ENSCLAG00000004116	SNRNP200	100	85.908	Chinchilla_lanigera
ENSPNAG00000010998	snrnp200	99	86.096	ENSCSAG00000017369	SNRNP200	100	86.096	Chlorocebus_sabaeus
ENSPNAG00000010998	snrnp200	75	94.488	ENSCHOG00000012981	-	58	94.488	Choloepus_hoffmanni
ENSPNAG00000010998	snrnp200	99	88.004	ENSCPBG00000022571	SNRNP200	100	88.004	Chrysemys_picta_bellii
ENSPNAG00000010998	snrnp200	99	72.459	ENSCING00000005082	-	99	72.459	Ciona_intestinalis
ENSPNAG00000010998	snrnp200	99	80.803	ENSCANG00000033932	SNRNP200	100	85.515	Colobus_angolensis_palliatus
ENSPNAG00000010998	snrnp200	99	86.096	ENSCGRG00001022610	Snrnp200	100	86.096	Cricetulus_griseus_chok1gshd
ENSPNAG00000010998	snrnp200	99	85.601	ENSCGRG00000016472	Snrnp200	100	85.601	Cricetulus_griseus_crigri
ENSPNAG00000010998	snrnp200	99	91.504	ENSCSEG00000016399	snrnp200	100	91.504	Cynoglossus_semilaevis
ENSPNAG00000010998	snrnp200	100	89.592	ENSCVAG00000017631	snrnp200	100	89.592	Cyprinodon_variegatus
ENSPNAG00000010998	snrnp200	100	90.918	ENSDARG00000077536	snrnp200	100	90.918	Danio_rerio
ENSPNAG00000010998	snrnp200	99	84.644	ENSDNOG00000011227	SNRNP200	100	84.644	Dasypus_novemcinctus
ENSPNAG00000010998	snrnp200	99	83.598	ENSDORG00000005861	Snrnp200	100	83.598	Dipodomys_ordii
ENSPNAG00000010998	snrnp200	100	69.879	FBgn0263599	l(3)72Ab	100	69.893	Drosophila_melanogaster
ENSPNAG00000010998	snrnp200	95	87.529	ENSETEG00000000162	SNRNP200	74	87.529	Echinops_telfairi
ENSPNAG00000010998	snrnp200	83	74.240	ENSEBUG00000016524	snrnp200	98	72.515	Eptatretus_burgeri
ENSPNAG00000010998	snrnp200	99	85.082	ENSEASG00005001884	SNRNP200	100	84.988	Equus_asinus_asinus
ENSPNAG00000010998	snrnp200	99	88.292	ENSECAG00000019675	SNRNP200	100	88.292	Equus_caballus
ENSPNAG00000010998	snrnp200	91	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSPNAG00000010998	snrnp200	99	91.024	ENSELUG00000018948	snrnp200	100	90.969	Esox_lucius
ENSPNAG00000010998	snrnp200	99	88.340	ENSFCAG00000010699	SNRNP200	100	88.340	Felis_catus
ENSPNAG00000010998	snrnp200	93	87.500	ENSFALG00000001368	-	95	87.500	Ficedula_albicollis
ENSPNAG00000010998	snrnp200	99	85.908	ENSFDAG00000004683	SNRNP200	100	85.908	Fukomys_damarensis
ENSPNAG00000010998	snrnp200	100	91.463	ENSFHEG00000003786	snrnp200	100	91.463	Fundulus_heteroclitus
ENSPNAG00000010998	snrnp200	100	89.724	ENSGMOG00000004881	snrnp200	99	89.724	Gadus_morhua
ENSPNAG00000010998	snrnp200	100	91.990	ENSGAFG00000010807	snrnp200	100	91.990	Gambusia_affinis
ENSPNAG00000010998	snrnp200	100	89.776	ENSGACG00000011474	snrnp200	99	89.823	Gasterosteus_aculeatus
ENSPNAG00000010998	snrnp200	95	92.369	ENSGAGG00000016069	SNRNP200	99	87.533	Gopherus_agassizii
ENSPNAG00000010998	snrnp200	99	86.096	ENSGGOG00000005174	SNRNP200	97	89.244	Gorilla_gorilla
ENSPNAG00000010998	snrnp200	97	87.080	ENSHBUG00000011322	snrnp200	99	87.126	Haplochromis_burtoni
ENSPNAG00000010998	snrnp200	99	85.955	ENSHGLG00000006654	SNRNP200	100	85.955	Heterocephalus_glaber_female
ENSPNAG00000010998	snrnp200	99	85.955	ENSHGLG00100018594	SNRNP200	100	85.955	Heterocephalus_glaber_male
ENSPNAG00000010998	snrnp200	99	86.096	ENSSTOG00000016351	SNRNP200	100	86.096	Ictidomys_tridecemlineatus
ENSPNAG00000010998	snrnp200	99	85.908	ENSJJAG00000023659	Snrnp200	100	85.908	Jaculus_jaculus
ENSPNAG00000010998	snrnp200	100	91.922	ENSKMAG00000003665	snrnp200	100	91.922	Kryptolebias_marmoratus
ENSPNAG00000010998	snrnp200	100	90.407	ENSLBEG00000021585	snrnp200	100	90.407	Labrus_bergylta
ENSPNAG00000010998	snrnp200	81	86.819	ENSLACG00000000226	SNRNP200	100	86.819	Latimeria_chalumnae
ENSPNAG00000010998	snrnp200	100	89.570	ENSLOCG00000015198	snrnp200	100	89.570	Lepisosteus_oculatus
ENSPNAG00000010998	snrnp200	99	85.908	ENSLAFG00000015626	SNRNP200	100	85.908	Loxodonta_africana
ENSPNAG00000010998	snrnp200	99	86.049	ENSMFAG00000040174	SNRNP200	99	90.116	Macaca_fascicularis
ENSPNAG00000010998	snrnp200	99	86.049	ENSMMUG00000023261	SNRNP200	100	86.049	Macaca_mulatta
ENSPNAG00000010998	snrnp200	99	86.002	ENSMNEG00000032398	SNRNP200	100	86.002	Macaca_nemestrina
ENSPNAG00000010998	snrnp200	99	86.096	ENSMLEG00000019083	SNRNP200	99	90.116	Mandrillus_leucophaeus
ENSPNAG00000010998	snrnp200	100	91.131	ENSMAMG00000007851	snrnp200	100	91.035	Mastacembelus_armatus
ENSPNAG00000010998	snrnp200	97	87.080	ENSMZEG00005010787	snrnp200	99	87.126	Maylandia_zebra
ENSPNAG00000010998	snrnp200	97	85.293	ENSMGAG00000001831	SNRNP200	99	85.306	Meleagris_gallopavo
ENSPNAG00000010998	snrnp200	99	86.142	ENSMAUG00000011825	Snrnp200	100	86.142	Mesocricetus_auratus
ENSPNAG00000010998	snrnp200	99	86.049	ENSMICG00000004710	SNRNP200	98	90.141	Microcebus_murinus
ENSPNAG00000010998	snrnp200	99	84.215	ENSMOCG00000011814	Snrnp200	100	84.215	Microtus_ochrogaster
ENSPNAG00000010998	snrnp200	99	88.769	ENSMMOG00000014167	snrnp200	100	88.723	Mola_mola
ENSPNAG00000010998	snrnp200	99	86.096	ENSMODG00000008475	SNRNP200	100	86.096	Monodelphis_domestica
ENSPNAG00000010998	snrnp200	99	90.648	ENSMALG00000001973	snrnp200	100	90.594	Monopterus_albus
ENSPNAG00000010998	snrnp200	99	86.002	MGP_CAROLIEiJ_G0024250	Snrnp200	100	86.002	Mus_caroli
ENSPNAG00000010998	snrnp200	99	86.049	ENSMUSG00000003660	Snrnp200	100	86.049	Mus_musculus
ENSPNAG00000010998	snrnp200	99	86.049	MGP_PahariEiJ_G0025695	Snrnp200	100	86.049	Mus_pahari
ENSPNAG00000010998	snrnp200	95	91.713	MGP_SPRETEiJ_G0025170	Snrnp200	100	91.713	Mus_spretus
ENSPNAG00000010998	snrnp200	99	86.096	ENSMPUG00000008949	SNRNP200	100	86.096	Mustela_putorius_furo
ENSPNAG00000010998	snrnp200	99	85.788	ENSMLUG00000010493	SNRNP200	100	85.788	Myotis_lucifugus
ENSPNAG00000010998	snrnp200	99	83.146	ENSMLUG00000027511	-	100	83.146	Myotis_lucifugus
ENSPNAG00000010998	snrnp200	99	86.096	ENSNGAG00000021993	Snrnp200	100	86.096	Nannospalax_galili
ENSPNAG00000010998	snrnp200	90	89.269	ENSNBRG00000017960	snrnp200	98	89.269	Neolamprologus_brichardi
ENSPNAG00000010998	snrnp200	99	81.767	ENSNLEG00000000025	SNRNP200	100	81.869	Nomascus_leucogenys
ENSPNAG00000010998	snrnp200	99	93.056	ENSMEUG00000010532	SNRNP200	79	93.056	Notamacropus_eugenii
ENSPNAG00000010998	snrnp200	96	84.728	ENSOPRG00000015464	SNRNP200	100	82.725	Ochotona_princeps
ENSPNAG00000010998	snrnp200	99	85.861	ENSODEG00000008366	SNRNP200	100	85.861	Octodon_degus
ENSPNAG00000010998	snrnp200	99	90.461	ENSONIG00000010714	snrnp200	100	90.407	Oreochromis_niloticus
ENSPNAG00000010998	snrnp200	99	86.049	ENSOCUG00000009864	SNRNP200	100	86.049	Oryctolagus_cuniculus
ENSPNAG00000010998	snrnp200	99	89.321	ENSORLG00000012286	snrnp200	100	89.321	Oryzias_latipes
ENSPNAG00000010998	snrnp200	99	89.368	ENSORLG00020004648	snrnp200	100	89.368	Oryzias_latipes_hni
ENSPNAG00000010998	snrnp200	99	89.415	ENSORLG00015019114	snrnp200	100	89.415	Oryzias_latipes_hsok
ENSPNAG00000010998	snrnp200	99	89.803	ENSOMEG00000011834	snrnp200	100	89.752	Oryzias_melastigma
ENSPNAG00000010998	snrnp200	99	86.142	ENSOGAG00000006879	SNRNP200	100	86.142	Otolemur_garnettii
ENSPNAG00000010998	snrnp200	99	85.166	ENSOARG00000013949	SNRNP200	100	85.166	Ovis_aries
ENSPNAG00000010998	snrnp200	99	86.096	ENSPPAG00000041559	SNRNP200	100	86.096	Pan_paniscus
ENSPNAG00000010998	snrnp200	99	86.189	ENSPPRG00000004435	SNRNP200	100	86.189	Panthera_pardus
ENSPNAG00000010998	snrnp200	99	85.768	ENSPTIG00000006380	SNRNP200	100	85.768	Panthera_tigris_altaica
ENSPNAG00000010998	snrnp200	99	86.096	ENSPTRG00000012230	SNRNP200	100	86.096	Pan_troglodytes
ENSPNAG00000010998	snrnp200	99	86.049	ENSPANG00000006017	SNRNP200	100	86.049	Papio_anubis
ENSPNAG00000010998	snrnp200	100	92.422	ENSPKIG00000014762	snrnp200	100	92.422	Paramormyrops_kingsleyae
ENSPNAG00000010998	snrnp200	99	84.839	ENSPSIG00000008580	SNRNP200	100	84.839	Pelodiscus_sinensis
ENSPNAG00000010998	snrnp200	99	85.955	ENSPCIG00000023050	SNRNP200	100	85.955	Phascolarctos_cinereus
ENSPNAG00000010998	snrnp200	100	89.663	ENSPFOG00000015110	snrnp200	100	89.663	Poecilia_formosa
ENSPNAG00000010998	snrnp200	97	89.005	ENSPLAG00000006711	snrnp200	99	89.005	Poecilia_latipinna
ENSPNAG00000010998	snrnp200	97	88.840	ENSPMEG00000021166	snrnp200	99	88.840	Poecilia_mexicana
ENSPNAG00000010998	snrnp200	100	92.134	ENSPREG00000008875	snrnp200	100	92.134	Poecilia_reticulata
ENSPNAG00000010998	snrnp200	99	86.096	ENSPPYG00000012068	SNRNP200	100	86.096	Pongo_abelii
ENSPNAG00000010998	snrnp200	96	94.231	ENSPCAG00000008536	SNRNP200	86	95.833	Procavia_capensis
ENSPNAG00000010998	snrnp200	99	86.096	ENSPCOG00000024608	SNRNP200	100	86.096	Propithecus_coquereli
ENSPNAG00000010998	snrnp200	96	90.481	ENSPVAG00000005860	SNRNP200	92	90.481	Pteropus_vampyrus
ENSPNAG00000010998	snrnp200	99	90.298	ENSPNYG00000017476	snrnp200	100	90.244	Pundamilia_nyererei
ENSPNAG00000010998	snrnp200	99	86.142	ENSRNOG00000012157	Snrnp200	100	86.142	Rattus_norvegicus
ENSPNAG00000010998	snrnp200	99	86.096	ENSRBIG00000044690	-	100	86.096	Rhinopithecus_bieti
ENSPNAG00000010998	snrnp200	99	86.096	ENSRROG00000037952	-	100	86.096	Rhinopithecus_roxellana
ENSPNAG00000010998	snrnp200	99	86.096	ENSSBOG00000035471	SNRNP200	97	90.560	Saimiri_boliviensis_boliviensis
ENSPNAG00000010998	snrnp200	97	85.583	ENSSHAG00000000758	SNRNP200	99	85.597	Sarcophilus_harrisii
ENSPNAG00000010998	snrnp200	99	90.836	ENSSFOG00015018826	snrnp200	100	90.781	Scleropages_formosus
ENSPNAG00000010998	snrnp200	99	90.742	ENSSMAG00000005463	snrnp200	100	90.688	Scophthalmus_maximus
ENSPNAG00000010998	snrnp200	99	90.883	ENSSDUG00000021410	snrnp200	100	90.828	Seriola_dumerili
ENSPNAG00000010998	snrnp200	99	90.789	ENSSLDG00000010884	snrnp200	100	90.735	Seriola_lalandi_dorsalis
ENSPNAG00000010998	snrnp200	95	87.399	ENSSARG00000010728	SNRNP200	96	87.366	Sorex_araneus
ENSPNAG00000010998	snrnp200	99	85.815	ENSSPUG00000003726	-	100	85.815	Sphenodon_punctatus
ENSPNAG00000010998	snrnp200	99	90.789	ENSSPAG00000001842	snrnp200	100	90.735	Stegastes_partitus
ENSPNAG00000010998	snrnp200	99	86.142	ENSSSCG00000008127	SNRNP200	100	86.142	Sus_scrofa
ENSPNAG00000010998	snrnp200	99	76.319	ENSTGUG00000014475	-	100	76.319	Taeniopygia_guttata
ENSPNAG00000010998	snrnp200	99	90.085	ENSTRUG00000001307	snrnp200	100	90.033	Takifugu_rubripes
ENSPNAG00000010998	snrnp200	99	83.001	ENSTNIG00000004320	snrnp200	100	78.806	Tetraodon_nigroviridis
ENSPNAG00000010998	snrnp200	81	86.111	ENSTBEG00000003329	-	67	86.111	Tupaia_belangeri
ENSPNAG00000010998	snrnp200	99	86.002	ENSTTRG00000004983	SNRNP200	100	86.002	Tursiops_truncatus
ENSPNAG00000010998	snrnp200	75	77.519	ENSUAMG00000008395	-	95	77.519	Ursus_americanus
ENSPNAG00000010998	snrnp200	99	86.189	ENSUMAG00000012385	SNRNP200	100	86.189	Ursus_maritimus
ENSPNAG00000010998	snrnp200	87	96.429	ENSVPAG00000006434	SNRNP200	66	96.429	Vicugna_pacos
ENSPNAG00000010998	snrnp200	99	88.340	ENSVVUG00000026247	SNRNP200	100	88.340	Vulpes_vulpes
ENSPNAG00000010998	snrnp200	99	85.500	ENSXETG00000001243	snrnp200	100	85.500	Xenopus_tropicalis
ENSPNAG00000010998	snrnp200	97	89.288	ENSXMAG00000002058	snrnp200	98	89.288	Xiphophorus_maculatus