EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000011062 (Gene tree)
Gene ID: 108435944
Gene Symbol: zic2b
Alias: hm:zeh0655|id:ibd5017|zic2.2|zic2l
Full Name: zinc finger protein ZIC 2-B-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 4111 bases
Position: chrKV575483.1:791978-796088
Accession: 108435944
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000004639	zf-C2H2	PF00096.26	2.3e-16	1	2
ENSPNAP00000004639	zf-C2H2	PF00096.26	2.3e-16	2	2
ENSPNAP00000004639	zf-met	PF12874.7	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000006670	-	2180	XM_017712106	ENSPNAP00000004639	386 (aa)	XP_017567595	UPI000814910C

Gene Model

Click here to download ENSPNAG00000011062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000011062's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000011062	zic2b	50	46.429	ENSPNAG00000005914	-	73	46.429
ENSPNAG00000011062	zic2b	53	41.322	ENSPNAG00000009176	-	86	41.322
ENSPNAG00000011062	zic2b	60	43.636	ENSPNAG00000016478	-	98	43.636
ENSPNAG00000011062	zic2b	50	43.158	ENSPNAG00000009184	-	78	43.158
ENSPNAG00000011062	zic2b	50	37.313	ENSPNAG00000012206	-	92	38.938
ENSPNAG00000011062	zic2b	51	35.556	ENSPNAG00000018395	-	62	38.017

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000011062	zic2b	100	87.345	ENSAMXG00000037612	zic2b	100	86.352	Astyanax_mexicanus
ENSPNAG00000011062	zic2b	58	65.833	ENSMLEG00000039873	ZIC2	90	61.154	Mandrillus_leucophaeus
ENSPNAG00000011062	zic2b	100	45.127	ENSPKIG00000014203	ZIC2	71	54.819	Paramormyrops_kingsleyae
ENSPNAG00000011062	zic2b	55	67.890	ENSSHAG00000003850	ZIC2	63	72.821	Sarcophilus_harrisii