EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000011085 (Gene tree)
Gene ID: 108441963
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 19412 bases
Position: chrKV575724.1:295097-314508
Accession: 108441963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000025824	MA3	PF02847.17	1.1e-22	1	1
ENSPNAP00000025824	MIF4G	PF02854.19	1.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000006632	-	4716	XM_017721762	ENSPNAP00000025824	888 (aa)	XP_017577251	UPI0008144953

Gene Model

Click here to download ENSPNAG00000011085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000011085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000011085	nom1	86	76.173	ENSAPOG00000012073	nom1	90	72.840	Acanthochromis_polyacanthus
ENSPNAG00000011085	nom1	78	57.163	ENSAMEG00000001412	NOM1	75	63.284	Ailuropoda_melanoleuca
ENSPNAG00000011085	nom1	84	77.040	ENSACIG00000018050	nom1	99	74.773	Amphilophus_citrinellus
ENSPNAG00000011085	nom1	60	74.812	ENSAOCG00000006229	nom1	66	71.964	Amphiprion_ocellaris
ENSPNAG00000011085	nom1	60	74.812	ENSAPEG00000015994	nom1	66	71.964	Amphiprion_percula
ENSPNAG00000011085	nom1	62	73.042	ENSATEG00000005405	nom1	68	72.924	Anabas_testudineus
ENSPNAG00000011085	nom1	76	55.508	ENSACAG00000011192	NOM1	64	62.094	Anolis_carolinensis
ENSPNAG00000011085	nom1	61	86.085	ENSAMXG00000041486	nom1	63	85.348	Astyanax_mexicanus
ENSPNAG00000011085	nom1	78	57.589	ENSBTAG00000016435	NOM1	61	65.076	Bos_taurus
ENSPNAG00000011085	nom1	78	57.895	ENSCJAG00000004336	NOM1	61	65.649	Callithrix_jacchus
ENSPNAG00000011085	nom1	78	55.811	ENSCAFG00020005121	NOM1	63	61.792	Canis_lupus_dingo
ENSPNAG00000011085	nom1	78	57.244	ENSCHIG00000020102	NOM1	65	62.774	Capra_hircus
ENSPNAG00000011085	nom1	78	56.657	ENSTSYG00000000227	NOM1	89	62.936	Carlito_syrichta
ENSPNAG00000011085	nom1	58	65.134	ENSCAPG00000016273	NOM1	99	65.134	Cavia_aperea
ENSPNAG00000011085	nom1	78	54.429	ENSCPOG00000025538	NOM1	63	58.288	Cavia_porcellus
ENSPNAG00000011085	nom1	70	66.114	ENSCCAG00000014944	NOM1	99	66.856	Cebus_capucinus
ENSPNAG00000011085	nom1	78	55.226	ENSCLAG00000000267	NOM1	61	64.054	Chinchilla_lanigera
ENSPNAG00000011085	nom1	64	65.655	ENSCPBG00000018215	NOM1	68	65.655	Chrysemys_picta_bellii
ENSPNAG00000011085	nom1	80	37.255	ENSCING00000005248	-	73	40.293	Ciona_intestinalis
ENSPNAG00000011085	nom1	58	64.683	ENSCANG00000041984	NOM1	89	64.683	Colobus_angolensis_palliatus
ENSPNAG00000011085	nom1	61	62.292	ENSCGRG00001020293	Nom1	63	62.292	Cricetulus_griseus_chok1gshd
ENSPNAG00000011085	nom1	58	63.462	ENSCGRG00000005405	Nom1	97	63.462	Cricetulus_griseus_crigri
ENSPNAG00000011085	nom1	94	54.935	ENSCSEG00000000932	nom1	87	69.901	Cynoglossus_semilaevis
ENSPNAG00000011085	nom1	80	64.706	ENSCVAG00000007562	nom1	66	71.143	Cyprinodon_variegatus
ENSPNAG00000011085	nom1	100	61.030	ENSDARG00000060027	nom1	100	77.002	Danio_rerio
ENSPNAG00000011085	nom1	58	52.751	ENSDORG00000015682	Nom1	80	51.439	Dipodomys_ordii
ENSPNAG00000011085	nom1	79	36.579	FBgn0035336	CG9004	59	40.509	Drosophila_melanogaster
ENSPNAG00000011085	nom1	58	65.326	ENSEASG00005001489	NOM1	61	65.326	Equus_asinus_asinus
ENSPNAG00000011085	nom1	61	63.956	ENSECAG00000007596	NOM1	58	63.956	Equus_caballus
ENSPNAG00000011085	nom1	61	73.818	ENSELUG00000006266	nom1	65	73.646	Esox_lucius
ENSPNAG00000011085	nom1	78	55.731	ENSFCAG00000006467	NOM1	65	63.469	Felis_catus
ENSPNAG00000011085	nom1	80	57.163	ENSFALG00000006904	NOM1	79	64.505	Ficedula_albicollis
ENSPNAG00000011085	nom1	98	49.264	ENSFDAG00000016241	NOM1	85	63.862	Fukomys_damarensis
ENSPNAG00000011085	nom1	62	71.583	ENSFHEG00000015974	nom1	68	70.723	Fundulus_heteroclitus
ENSPNAG00000011085	nom1	81	60.912	ENSGMOG00000005129	nom1	87	70.286	Gadus_morhua
ENSPNAG00000011085	nom1	80	57.719	ENSGALG00000006437	NOM1	61	66.667	Gallus_gallus
ENSPNAG00000011085	nom1	63	70.789	ENSGAFG00000003211	nom1	66	71.455	Gambusia_affinis
ENSPNAG00000011085	nom1	79	56.638	ENSGAGG00000014347	NOM1	73	65.844	Gopherus_agassizii
ENSPNAG00000011085	nom1	61	63.486	ENSGGOG00000010920	NOM1	58	63.486	Gorilla_gorilla
ENSPNAG00000011085	nom1	98	50.000	ENSHGLG00000007392	NOM1	62	63.031	Heterocephalus_glaber_female
ENSPNAG00000011085	nom1	87	65.287	ENSHGLG00100014407	NOM1	62	63.031	Heterocephalus_glaber_male
ENSPNAG00000011085	nom1	59	83.523	ENSIPUG00000013980	nom1	64	82.037	Ictalurus_punctatus
ENSPNAG00000011085	nom1	64	61.014	ENSSTOG00000031736	NOM1	96	62.182	Ictidomys_tridecemlineatus
ENSPNAG00000011085	nom1	55	64.959	ENSJJAG00000011716	Nom1	98	64.959	Jaculus_jaculus
ENSPNAG00000011085	nom1	61	71.664	ENSLBEG00000009252	nom1	64	71.767	Labrus_bergylta
ENSPNAG00000011085	nom1	80	56.292	ENSLACG00000011777	NOM1	67	64.452	Latimeria_chalumnae
ENSPNAG00000011085	nom1	81	62.707	ENSLOCG00000012452	nom1	92	71.455	Lepisosteus_oculatus
ENSPNAG00000011085	nom1	85	57.963	ENSLAFG00000007119	NOM1	74	58.209	Loxodonta_africana
ENSPNAG00000011085	nom1	78	54.043	ENSMMUG00000039033	NOM1	61	58.011	Macaca_mulatta
ENSPNAG00000011085	nom1	58	65.451	ENSMLEG00000037062	NOM1	98	65.451	Mandrillus_leucophaeus
ENSPNAG00000011085	nom1	98	57.658	ENSMAMG00000004118	nom1	65	72.527	Mastacembelus_armatus
ENSPNAG00000011085	nom1	79	57.022	ENSMGAG00000005051	NOM1	84	62.847	Meleagris_gallopavo
ENSPNAG00000011085	nom1	61	63.031	ENSMAUG00000017988	Nom1	65	63.031	Mesocricetus_auratus
ENSPNAG00000011085	nom1	58	64.875	ENSMICG00000017531	NOM1	87	64.875	Microcebus_murinus
ENSPNAG00000011085	nom1	64	60.140	ENSMOCG00000015962	Nom1	64	62.222	Microtus_ochrogaster
ENSPNAG00000011085	nom1	89	66.789	ENSMMOG00000004419	nom1	92	65.317	Mola_mola
ENSPNAG00000011085	nom1	93	58.234	ENSMALG00000008800	nom1	64	74.111	Monopterus_albus
ENSPNAG00000011085	nom1	98	47.582	MGP_CAROLIEiJ_G0027043	Nom1	87	60.781	Mus_caroli
ENSPNAG00000011085	nom1	98	47.811	ENSMUSG00000001569	Nom1	63	60.781	Mus_musculus
ENSPNAG00000011085	nom1	82	52.285	MGP_SPRETEiJ_G0028039	Nom1	63	60.781	Mus_spretus
ENSPNAG00000011085	nom1	78	53.989	ENSMPUG00000009745	NOM1	79	60.478	Mustela_putorius_furo
ENSPNAG00000011085	nom1	70	57.735	ENSMLUG00000009129	NOM1	91	61.594	Myotis_lucifugus
ENSPNAG00000011085	nom1	98	58.050	ENSNBRG00000016429	nom1	95	74.669	Neolamprologus_brichardi
ENSPNAG00000011085	nom1	61	61.861	ENSNLEG00000000238	NOM1	63	61.861	Nomascus_leucogenys
ENSPNAG00000011085	nom1	50	64.684	ENSMEUG00000001108	NOM1	53	65.056	Notamacropus_eugenii
ENSPNAG00000011085	nom1	78	54.701	ENSODEG00000009399	NOM1	78	60.623	Octodon_degus
ENSPNAG00000011085	nom1	52	63.793	ENSOANG00000006139	-	97	63.793	Ornithorhynchus_anatinus
ENSPNAG00000011085	nom1	83	44.607	ENSOCUG00000021448	-	89	51.277	Oryctolagus_cuniculus
ENSPNAG00000011085	nom1	78	57.977	ENSOCUG00000004071	-	64	64.220	Oryctolagus_cuniculus
ENSPNAG00000011085	nom1	99	56.160	ENSORLG00000010541	nom1	67	70.962	Oryzias_latipes
ENSPNAG00000011085	nom1	80	63.573	ENSORLG00020010789	nom1	71	71.664	Oryzias_latipes_hni
ENSPNAG00000011085	nom1	90	73.524	ENSORLG00015010475	nom1	72	70.962	Oryzias_latipes_hsok
ENSPNAG00000011085	nom1	60	73.684	ENSOMEG00000004219	nom1	65	72.344	Oryzias_melastigma
ENSPNAG00000011085	nom1	58	66.219	ENSOGAG00000001124	NOM1	85	66.219	Otolemur_garnettii
ENSPNAG00000011085	nom1	78	56.392	ENSOARG00000007261	NOM1	73	62.454	Ovis_aries
ENSPNAG00000011085	nom1	78	58.512	ENSPPAG00000041374	NOM1	63	63.853	Pan_paniscus
ENSPNAG00000011085	nom1	78	55.492	ENSPTIG00000013532	NOM1	74	63.168	Panthera_tigris_altaica
ENSPNAG00000011085	nom1	78	56.638	ENSPTRG00000019917	NOM1	63	63.853	Pan_troglodytes
ENSPNAG00000011085	nom1	78	58.060	ENSPANG00000007605	NOM1	60	65.451	Papio_anubis
ENSPNAG00000011085	nom1	99	53.890	ENSPKIG00000005825	nom1	91	68.535	Paramormyrops_kingsleyae
ENSPNAG00000011085	nom1	61	64.299	ENSPSIG00000017848	NOM1	91	64.299	Pelodiscus_sinensis
ENSPNAG00000011085	nom1	81	63.251	ENSPMGG00000002577	nom1	67	71.898	Periophthalmus_magnuspinnatus
ENSPNAG00000011085	nom1	98	48.594	ENSPEMG00000024180	Nom1	63	62.593	Peromyscus_maniculatus_bairdii
ENSPNAG00000011085	nom1	98	49.889	ENSPCIG00000027941	NOM1	60	64.168	Phascolarctos_cinereus
ENSPNAG00000011085	nom1	99	55.629	ENSPFOG00000015771	nom1	65	71.688	Poecilia_formosa
ENSPNAG00000011085	nom1	87	72.812	ENSPLAG00000007856	nom1	68	71.506	Poecilia_latipinna
ENSPNAG00000011085	nom1	87	73.184	ENSPMEG00000014155	nom1	99	56.502	Poecilia_mexicana
ENSPNAG00000011085	nom1	98	55.846	ENSPREG00000008850	nom1	66	71.506	Poecilia_reticulata
ENSPNAG00000011085	nom1	78	53.228	ENSPPYG00000018222	NOM1	61	57.615	Pongo_abelii
ENSPNAG00000011085	nom1	54	59.813	ENSPCAG00000000440	NOM1	54	59.813	Procavia_capensis
ENSPNAG00000011085	nom1	58	63.916	ENSPCOG00000015222	NOM1	98	63.916	Propithecus_coquereli
ENSPNAG00000011085	nom1	78	55.237	ENSPVAG00000014760	NOM1	60	63.148	Pteropus_vampyrus
ENSPNAG00000011085	nom1	61	72.243	ENSPNYG00000006975	nom1	98	72.243	Pundamilia_nyererei
ENSPNAG00000011085	nom1	79	53.125	ENSRNOG00000048969	AABR07059041.1	64	60.577	Rattus_norvegicus
ENSPNAG00000011085	nom1	78	57.955	ENSRBIG00000037042	NOM1	62	63.401	Rhinopithecus_bieti
ENSPNAG00000011085	nom1	78	57.812	ENSRROG00000037293	NOM1	62	63.216	Rhinopithecus_roxellana
ENSPNAG00000011085	nom1	60	64.870	ENSSHAG00000017998	-	79	64.630	Sarcophilus_harrisii
ENSPNAG00000011085	nom1	55	71.107	ENSSFOG00015003196	nom1	100	71.107	Scleropages_formosus
ENSPNAG00000011085	nom1	98	58.656	ENSSMAG00000011047	nom1	66	71.942	Scophthalmus_maximus
ENSPNAG00000011085	nom1	59	75.000	ENSSDUG00000006834	nom1	65	73.406	Seriola_dumerili
ENSPNAG00000011085	nom1	98	59.070	ENSSLDG00000021812	nom1	65	73.406	Seriola_lalandi_dorsalis
ENSPNAG00000011085	nom1	79	48.818	ENSSPUG00000002556	NOM1	90	66.667	Sphenodon_punctatus
ENSPNAG00000011085	nom1	60	73.432	ENSSPAG00000000953	nom1	65	71.607	Stegastes_partitus
ENSPNAG00000011085	nom1	80	56.546	ENSTGUG00000000702	-	75	65.909	Taeniopygia_guttata
ENSPNAG00000011085	nom1	62	70.758	ENSTRUG00000010239	nom1	66	70.758	Takifugu_rubripes
ENSPNAG00000011085	nom1	98	55.606	ENSTNIG00000012783	nom1	70	68.603	Tetraodon_nigroviridis
ENSPNAG00000011085	nom1	77	56.340	ENSTTRG00000009691	NOM1	61	64.660	Tursiops_truncatus
ENSPNAG00000011085	nom1	78	57.245	ENSUAMG00000025450	NOM1	62	63.586	Ursus_americanus
ENSPNAG00000011085	nom1	78	56.671	ENSUMAG00000014275	NOM1	78	63.838	Ursus_maritimus
ENSPNAG00000011085	nom1	78	55.524	ENSVVUG00000002608	NOM1	62	62.222	Vulpes_vulpes
ENSPNAG00000011085	nom1	85	53.181	ENSXETG00000021611	nom1	82	70.874	Xenopus_tropicalis