EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000011104 (Gene tree)
Gene ID: 108430121
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 13398 bases
Position: chrKV575289.1:4347454-4360851
Accession: 108430121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000004625	KH_1	PF00013.29	1.1e-189	1	14
ENSPNAP00000004625	KH_1	PF00013.29	1.1e-189	2	14
ENSPNAP00000004625	KH_1	PF00013.29	1.1e-189	3	14
ENSPNAP00000004625	KH_1	PF00013.29	1.1e-189	4	14
ENSPNAP00000004625	KH_1	PF00013.29	1.1e-189	5	14
ENSPNAP00000004625	KH_1	PF00013.29	1.1e-189	6	14
ENSPNAP00000004625	KH_1	PF00013.29	1.1e-189	7	14
ENSPNAP00000004625	KH_1	PF00013.29	1.1e-189	8	14
ENSPNAP00000004625	KH_1	PF00013.29	1.1e-189	9	14
ENSPNAP00000004625	KH_1	PF00013.29	1.1e-189	10	14
ENSPNAP00000004625	KH_1	PF00013.29	1.1e-189	11	14
ENSPNAP00000004625	KH_1	PF00013.29	1.1e-189	12	14
ENSPNAP00000004625	KH_1	PF00013.29	1.1e-189	13	14
ENSPNAP00000004625	KH_1	PF00013.29	1.1e-189	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000006708	-	4085	XM_017702376	ENSPNAP00000004625	1263 (aa)	XP_017557865	UPI000814AF3A

Gene Model

Click here to download ENSPNAG00000011104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000011104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000011104	hdlbpb	100	67.191	ENSPNAG00000029610	hdlbpa	100	67.191

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000011104	hdlbpb	100	88.091	ENSAPOG00000006904	hdlbpb	100	88.091	Acanthochromis_polyacanthus
ENSPNAG00000011104	hdlbpb	100	83.937	ENSACIG00000016154	hdlbpb	100	84.094	Amphilophus_citrinellus
ENSPNAG00000011104	hdlbpb	100	88.328	ENSAOCG00000004083	hdlbpb	100	88.328	Amphiprion_ocellaris
ENSPNAG00000011104	hdlbpb	100	88.249	ENSAPEG00000012270	hdlbpb	100	88.249	Amphiprion_percula
ENSPNAG00000011104	hdlbpb	100	87.382	ENSATEG00000019877	hdlbpb	100	87.382	Anabas_testudineus
ENSPNAG00000011104	hdlbpb	100	80.998	ENSACAG00000003606	-	100	80.998	Anolis_carolinensis
ENSPNAG00000011104	hdlbpb	100	87.618	ENSACLG00000006618	hdlbpb	100	87.618	Astatotilapia_calliptera
ENSPNAG00000011104	hdlbpb	100	85.951	ENSAMXG00000019946	hdlbpb	100	85.399	Astyanax_mexicanus
ENSPNAG00000011104	hdlbpb	100	86.740	ENSCSEG00000000955	hdlbpb	100	86.740	Cynoglossus_semilaevis
ENSPNAG00000011104	hdlbpb	100	87.303	ENSCVAG00000005345	hdlbpb	100	87.303	Cyprinodon_variegatus
ENSPNAG00000011104	hdlbpb	99	89.303	ENSDARG00000061864	hdlbpb	99	89.303	Danio_rerio
ENSPNAG00000011104	hdlbpb	92	69.376	ENSEBUG00000005304	hdlbpb	96	69.376	Eptatretus_burgeri
ENSPNAG00000011104	hdlbpb	100	76.415	ENSELUG00000019925	hdlbpb	100	75.118	Esox_lucius
ENSPNAG00000011104	hdlbpb	87	34.315	ENSFHEG00000001701	hdlbpb	100	82.715	Fundulus_heteroclitus
ENSPNAG00000011104	hdlbpb	96	84.044	ENSGMOG00000004522	hdlbpb	79	84.044	Gadus_morhua
ENSPNAG00000011104	hdlbpb	100	87.224	ENSGAFG00000005278	hdlbpb	100	87.224	Gambusia_affinis
ENSPNAG00000011104	hdlbpb	99	85.320	ENSGACG00000019361	hdlbpb	100	85.399	Gasterosteus_aculeatus
ENSPNAG00000011104	hdlbpb	100	87.461	ENSHBUG00000018434	hdlbpb	100	87.461	Haplochromis_burtoni
ENSPNAG00000011104	hdlbpb	100	92.654	ENSIPUG00000003291	HDLBP	100	92.926	Ictalurus_punctatus
ENSPNAG00000011104	hdlbpb	100	86.987	ENSKMAG00000016562	hdlbpb	100	86.987	Kryptolebias_marmoratus
ENSPNAG00000011104	hdlbpb	100	87.461	ENSLBEG00000027855	hdlbpb	100	87.461	Labrus_bergylta
ENSPNAG00000011104	hdlbpb	100	71.792	ENSLACG00000007661	hdlbpb	100	83.563	Latimeria_chalumnae
ENSPNAG00000011104	hdlbpb	100	82.753	ENSLOCG00000013909	hdlbpb	100	82.753	Lepisosteus_oculatus
ENSPNAG00000011104	hdlbpb	100	87.776	ENSMAMG00000003035	hdlbpb	100	87.776	Mastacembelus_armatus
ENSPNAG00000011104	hdlbpb	100	87.618	ENSMZEG00005021465	hdlbpb	100	87.618	Maylandia_zebra
ENSPNAG00000011104	hdlbpb	100	86.493	ENSMMOG00000012525	hdlbpb	100	86.572	Mola_mola
ENSPNAG00000011104	hdlbpb	100	85.568	ENSMALG00000008938	hdlbpb	100	85.568	Monopterus_albus
ENSPNAG00000011104	hdlbpb	100	87.697	ENSNBRG00000002236	hdlbpb	100	87.697	Neolamprologus_brichardi
ENSPNAG00000011104	hdlbpb	100	87.382	ENSONIG00000009211	hdlbpb	100	87.461	Oreochromis_niloticus
ENSPNAG00000011104	hdlbpb	100	86.740	ENSORLG00000006581	hdlbpb	100	86.740	Oryzias_latipes
ENSPNAG00000011104	hdlbpb	100	86.582	ENSORLG00020010012	hdlbpb	100	86.582	Oryzias_latipes_hni
ENSPNAG00000011104	hdlbpb	100	86.740	ENSORLG00015006863	hdlbpb	100	86.819	Oryzias_latipes_hsok
ENSPNAG00000011104	hdlbpb	100	86.661	ENSOMEG00000011131	hdlbpb	100	86.661	Oryzias_melastigma
ENSPNAG00000011104	hdlbpb	100	89.074	ENSPKIG00000005966	hdlbpb	100	89.232	Paramormyrops_kingsleyae
ENSPNAG00000011104	hdlbpb	93	89.167	ENSPMGG00000019853	hdlbpb	99	89.167	Periophthalmus_magnuspinnatus
ENSPNAG00000011104	hdlbpb	94	73.985	ENSPMAG00000002131	hdlbpb	100	73.985	Petromyzon_marinus
ENSPNAG00000011104	hdlbpb	92	64.883	ENSPMAG00000000249	-	99	65.273	Petromyzon_marinus
ENSPNAG00000011104	hdlbpb	100	86.583	ENSPFOG00000008755	hdlbpb	100	86.583	Poecilia_formosa
ENSPNAG00000011104	hdlbpb	100	87.539	ENSPLAG00000007055	hdlbpb	100	87.539	Poecilia_latipinna
ENSPNAG00000011104	hdlbpb	100	87.461	ENSPMEG00000001952	hdlbpb	100	87.461	Poecilia_mexicana
ENSPNAG00000011104	hdlbpb	100	87.618	ENSPREG00000012848	hdlbpb	100	87.618	Poecilia_reticulata
ENSPNAG00000011104	hdlbpb	100	87.609	ENSPNYG00000022467	hdlbpb	100	87.609	Pundamilia_nyererei
ENSPNAG00000011104	hdlbpb	100	89.074	ENSSFOG00015023199	hdlbpb	100	89.074	Scleropages_formosus
ENSPNAG00000011104	hdlbpb	100	87.461	ENSSMAG00000008790	hdlbpb	100	87.461	Scophthalmus_maximus
ENSPNAG00000011104	hdlbpb	100	87.687	ENSSDUG00000020694	hdlbpb	100	87.687	Seriola_dumerili
ENSPNAG00000011104	hdlbpb	100	87.609	ENSSLDG00000020807	hdlbpb	100	87.609	Seriola_lalandi_dorsalis
ENSPNAG00000011104	hdlbpb	100	81.948	ENSSPUG00000018688	-	100	81.948	Sphenodon_punctatus
ENSPNAG00000011104	hdlbpb	100	87.934	ENSSPAG00000016969	hdlbpb	100	87.934	Stegastes_partitus
ENSPNAG00000011104	hdlbpb	98	83.769	ENSTRUG00000012888	hdlbpb	99	83.769	Takifugu_rubripes
ENSPNAG00000011104	hdlbpb	99	85.356	ENSTNIG00000002555	hdlbpb	100	85.356	Tetraodon_nigroviridis
ENSPNAG00000011104	hdlbpb	100	65.317	ENSXCOG00000001797	hdlbpb	100	78.973	Xiphophorus_couchianus
ENSPNAG00000011104	hdlbpb	100	87.224	ENSXMAG00000015633	hdlbpb	100	87.224	Xiphophorus_maculatus