EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000011262 (Gene tree)
Gene ID: 108424506
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 6460 bases
Position: chrKV575309.1:2795795-2802254
Accession: 108424506
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000004908	RRM_1	PF00076.22	9.8e-33	1	2
ENSPNAP00000004908	RRM_1	PF00076.22	9.8e-33	2	2
ENSPNAP00000025980	RRM_1	PF00076.22	2.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000006241	-	1177	-	ENSPNAP00000025980	148 (aa)	-	-
ENSPNAT00000006231	-	1550	XM_017692570	ENSPNAP00000004908	260 (aa)	XP_017548059	UPI00081454C2

Gene Model

Click here to download ENSPNAG00000011262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000011262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000011262	srsf5b	81	60.833	ENSPNAG00000023179	-	92	57.143
ENSPNAG00000011262	srsf5b	82	45.238	ENSPNAG00000014601	srsf1b	64	47.024
ENSPNAG00000011262	srsf5b	84	38.760	ENSPNAG00000003588	srsf9	68	44.318
ENSPNAG00000011262	srsf5b	84	72.656	ENSPNAG00000021333	srsf5a	65	72.826
ENSPNAG00000011262	srsf5b	82	61.983	ENSPNAG00000023844	srsf4	52	63.068
ENSPNAG00000011262	srsf5b	82	48.413	ENSPNAG00000022241	srsf1a	64	47.619

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000011262	srsf5b	88	77.099	ENSG00000100650	SRSF5	98	79.200	Homo_sapiens
ENSPNAG00000011262	srsf5b	84	93.750	ENSAPOG00000008642	srsf5b	94	79.562	Acanthochromis_polyacanthus
ENSPNAG00000011262	srsf5b	84	79.200	ENSAMEG00000014574	SRSF5	67	82.162	Ailuropoda_melanoleuca
ENSPNAG00000011262	srsf5b	84	93.023	ENSACIG00000010742	srsf5b	100	76.744	Amphilophus_citrinellus
ENSPNAG00000011262	srsf5b	84	93.750	ENSAOCG00000005719	srsf5b	100	76.976	Amphiprion_ocellaris
ENSPNAG00000011262	srsf5b	84	93.750	ENSAPEG00000007830	srsf5b	100	76.976	Amphiprion_percula
ENSPNAG00000011262	srsf5b	84	93.750	ENSATEG00000019112	srsf5b	65	93.122	Anabas_testudineus
ENSPNAG00000011262	srsf5b	80	77.966	ENSAPLG00000014681	SRSF5	69	79.032	Anas_platyrhynchos
ENSPNAG00000011262	srsf5b	84	80.000	ENSACAG00000005143	SRSF5	69	83.243	Anolis_carolinensis
ENSPNAG00000011262	srsf5b	88	77.099	ENSANAG00000027977	-	92	78.626	Aotus_nancymaae
ENSPNAG00000011262	srsf5b	84	75.200	ENSANAG00000037529	-	95	76.800	Aotus_nancymaae
ENSPNAG00000011262	srsf5b	84	93.750	ENSACLG00000026424	srsf5b	65	94.180	Astatotilapia_calliptera
ENSPNAG00000011262	srsf5b	100	99.324	ENSAMXG00000011932	srsf5b	100	99.324	Astyanax_mexicanus
ENSPNAG00000011262	srsf5b	84	79.200	ENSBTAG00000011596	SRSF5	67	82.162	Bos_taurus
ENSPNAG00000011262	srsf5b	88	77.099	ENSCJAG00000014884	SRSF5	92	78.626	Callithrix_jacchus
ENSPNAG00000011262	srsf5b	84	79.200	ENSCAFG00000016589	SRSF5	67	82.162	Canis_familiaris
ENSPNAG00000011262	srsf5b	84	79.200	ENSCAFG00020005661	SRSF5	67	82.162	Canis_lupus_dingo
ENSPNAG00000011262	srsf5b	84	80.000	ENSCHIG00000016794	SRSF5	66	82.162	Capra_hircus
ENSPNAG00000011262	srsf5b	88	77.863	ENSTSYG00000007786	SRSF5	92	78.626	Carlito_syrichta
ENSPNAG00000011262	srsf5b	84	79.200	ENSCAPG00000008801	SRSF5	66	82.162	Cavia_aperea
ENSPNAG00000011262	srsf5b	84	79.200	ENSCPOG00000039926	SRSF5	66	82.162	Cavia_porcellus
ENSPNAG00000011262	srsf5b	88	77.099	ENSCCAG00000029002	SRSF5	92	78.626	Cebus_capucinus
ENSPNAG00000011262	srsf5b	88	77.099	ENSCATG00000045051	SRSF5	92	78.626	Cercocebus_atys
ENSPNAG00000011262	srsf5b	84	79.200	ENSCLAG00000004755	SRSF5	67	82.162	Chinchilla_lanigera
ENSPNAG00000011262	srsf5b	84	79.200	ENSCSAG00000013041	SRSF5	67	82.162	Chlorocebus_sabaeus
ENSPNAG00000011262	srsf5b	84	78.400	ENSCPBG00000021653	SRSF5	68	82.703	Chrysemys_picta_bellii
ENSPNAG00000011262	srsf5b	88	77.099	ENSCANG00000030560	SRSF5	92	78.626	Colobus_angolensis_palliatus
ENSPNAG00000011262	srsf5b	84	79.200	ENSCGRG00001015339	Srsf5	68	82.162	Cricetulus_griseus_chok1gshd
ENSPNAG00000011262	srsf5b	84	79.200	ENSCGRG00000009833	Srsf5	68	82.162	Cricetulus_griseus_crigri
ENSPNAG00000011262	srsf5b	84	89.231	ENSCSEG00000003801	srsf5b	66	91.623	Cynoglossus_semilaevis
ENSPNAG00000011262	srsf5b	84	88.281	ENSCVAG00000017240	srsf5b	90	75.510	Cyprinodon_variegatus
ENSPNAG00000011262	srsf5b	99	96.599	ENSDARG00000027734	srsf5b	90	98.387	Danio_rerio
ENSPNAG00000011262	srsf5b	84	81.600	ENSDNOG00000006160	SRSF5	68	82.162	Dasypus_novemcinctus
ENSPNAG00000011262	srsf5b	84	79.200	ENSDORG00000003989	Srsf5	68	82.162	Dipodomys_ordii
ENSPNAG00000011262	srsf5b	84	73.387	ENSETEG00000020396	SRSF5	68	78.919	Echinops_telfairi
ENSPNAG00000011262	srsf5b	84	63.200	ENSEBUG00000006229	srsf5b	69	66.129	Eptatretus_burgeri
ENSPNAG00000011262	srsf5b	84	79.200	ENSEASG00005016615	SRSF5	67	82.162	Equus_asinus_asinus
ENSPNAG00000011262	srsf5b	88	77.863	ENSECAG00000026873	SRSF5	92	78.626	Equus_caballus
ENSPNAG00000011262	srsf5b	100	82.249	ENSELUG00000019852	srsf5b	100	82.249	Esox_lucius
ENSPNAG00000011262	srsf5b	88	77.863	ENSFCAG00000008848	SRSF5	92	78.626	Felis_catus
ENSPNAG00000011262	srsf5b	84	76.613	ENSFALG00000004979	SRSF5	68	82.065	Ficedula_albicollis
ENSPNAG00000011262	srsf5b	84	79.200	ENSFDAG00000011562	SRSF5	68	82.162	Fukomys_damarensis
ENSPNAG00000011262	srsf5b	95	79.853	ENSFHEG00000009476	srsf5b	62	93.651	Fundulus_heteroclitus
ENSPNAG00000011262	srsf5b	84	89.706	ENSGMOG00000000595	srsf5b	99	79.204	Gadus_morhua
ENSPNAG00000011262	srsf5b	88	75.385	ENSGALG00000009421	SRSF5	92	76.923	Gallus_gallus
ENSPNAG00000011262	srsf5b	84	93.750	ENSGAFG00000002865	srsf5b	63	93.651	Gambusia_affinis
ENSPNAG00000011262	srsf5b	100	78.125	ENSGACG00000007834	srsf5b	100	81.250	Gasterosteus_aculeatus
ENSPNAG00000011262	srsf5b	84	78.400	ENSGAGG00000004447	SRSF5	68	82.703	Gopherus_agassizii
ENSPNAG00000011262	srsf5b	88	77.099	ENSGGOG00000016462	SRSF5	92	78.626	Gorilla_gorilla
ENSPNAG00000011262	srsf5b	84	93.750	ENSHBUG00000012462	srsf5b	100	87.681	Haplochromis_burtoni
ENSPNAG00000011262	srsf5b	84	78.400	ENSHGLG00000010147	SRSF5	67	81.622	Heterocephalus_glaber_female
ENSPNAG00000011262	srsf5b	84	78.400	ENSHGLG00100015328	SRSF5	67	81.622	Heterocephalus_glaber_male
ENSPNAG00000011262	srsf5b	87	52.423	ENSHGLG00100000095	-	62	60.795	Heterocephalus_glaber_male
ENSPNAG00000011262	srsf5b	84	81.818	ENSHCOG00000005592	srsf5b	66	84.974	Hippocampus_comes
ENSPNAG00000011262	srsf5b	84	79.200	ENSSTOG00000020672	SRSF5	67	82.162	Ictidomys_tridecemlineatus
ENSPNAG00000011262	srsf5b	84	79.200	ENSJJAG00000001688	Srsf5	67	82.162	Jaculus_jaculus
ENSPNAG00000011262	srsf5b	100	89.333	ENSKMAG00000020486	srsf5b	100	89.333	Kryptolebias_marmoratus
ENSPNAG00000011262	srsf5b	84	92.308	ENSLBEG00000013647	srsf5b	65	90.576	Labrus_bergylta
ENSPNAG00000011262	srsf5b	84	82.400	ENSLACG00000005874	SRSF5	69	84.409	Latimeria_chalumnae
ENSPNAG00000011262	srsf5b	84	83.846	ENSLOCG00000012438	srsf5b	70	86.316	Lepisosteus_oculatus
ENSPNAG00000011262	srsf5b	84	80.800	ENSLAFG00000005260	SRSF5	67	81.622	Loxodonta_africana
ENSPNAG00000011262	srsf5b	88	77.099	ENSMFAG00000002393	SRSF5	92	78.626	Macaca_fascicularis
ENSPNAG00000011262	srsf5b	88	77.099	ENSMNEG00000030872	SRSF5	92	78.626	Macaca_nemestrina
ENSPNAG00000011262	srsf5b	88	77.099	ENSMLEG00000030017	SRSF5	92	78.626	Mandrillus_leucophaeus
ENSPNAG00000011262	srsf5b	84	93.750	ENSMAMG00000002673	srsf5b	100	76.792	Mastacembelus_armatus
ENSPNAG00000011262	srsf5b	84	93.750	ENSMZEG00005003550	srsf5b	65	94.180	Maylandia_zebra
ENSPNAG00000011262	srsf5b	54	77.305	ENSMGAG00000011835	SRSF5	63	76.552	Meleagris_gallopavo
ENSPNAG00000011262	srsf5b	84	79.200	ENSMAUG00000009544	Srsf5	67	82.162	Mesocricetus_auratus
ENSPNAG00000011262	srsf5b	88	77.863	ENSMICG00000037432	-	92	78.626	Microcebus_murinus
ENSPNAG00000011262	srsf5b	84	81.600	ENSMOCG00000013134	Srsf5	67	82.162	Microtus_ochrogaster
ENSPNAG00000011262	srsf5b	99	76.471	ENSMMOG00000000137	srsf5b	91	79.739	Mola_mola
ENSPNAG00000011262	srsf5b	84	78.400	ENSMODG00000011362	SRSF5	68	82.703	Monodelphis_domestica
ENSPNAG00000011262	srsf5b	100	84.967	ENSMALG00000021875	srsf5b	100	86.928	Monopterus_albus
ENSPNAG00000011262	srsf5b	84	79.200	ENSMUSG00000021134	Srsf5	96	93.182	Mus_musculus
ENSPNAG00000011262	srsf5b	84	79.200	MGP_PahariEiJ_G0029659	Srsf5	68	82.162	Mus_pahari
ENSPNAG00000011262	srsf5b	84	79.200	ENSMPUG00000007458	SRSF5	67	82.162	Mustela_putorius_furo
ENSPNAG00000011262	srsf5b	84	79.200	ENSMLUG00000011939	SRSF5	65	82.162	Myotis_lucifugus
ENSPNAG00000011262	srsf5b	84	79.200	ENSNGAG00000010073	-	67	82.162	Nannospalax_galili
ENSPNAG00000011262	srsf5b	84	92.308	ENSNBRG00000001285	srsf5b	100	71.336	Neolamprologus_brichardi
ENSPNAG00000011262	srsf5b	88	77.099	ENSNLEG00000001615	SRSF5	92	78.626	Nomascus_leucogenys
ENSPNAG00000011262	srsf5b	84	79.200	ENSOPRG00000008286	SRSF5	65	82.162	Ochotona_princeps
ENSPNAG00000011262	srsf5b	84	76.800	ENSODEG00000000700	-	69	80.000	Octodon_degus
ENSPNAG00000011262	srsf5b	84	79.200	ENSODEG00000013469	-	68	82.162	Octodon_degus
ENSPNAG00000011262	srsf5b	84	93.750	ENSONIG00000005759	srsf5b	65	94.180	Oreochromis_niloticus
ENSPNAG00000011262	srsf5b	84	71.200	ENSOANG00000013336	SRSF5	68	77.838	Ornithorhynchus_anatinus
ENSPNAG00000011262	srsf5b	84	79.200	ENSOCUG00000009274	SRSF5	66	82.162	Oryctolagus_cuniculus
ENSPNAG00000011262	srsf5b	84	85.385	ENSORLG00000029854	srsf5b	59	87.958	Oryzias_latipes
ENSPNAG00000011262	srsf5b	84	87.692	ENSORLG00015001720	srsf5b	65	89.529	Oryzias_latipes_hsok
ENSPNAG00000011262	srsf5b	84	81.600	ENSOGAG00000015122	SRSF5	67	82.162	Otolemur_garnettii
ENSPNAG00000011262	srsf5b	88	77.099	ENSPPAG00000029921	SRSF5	92	78.626	Pan_paniscus
ENSPNAG00000011262	srsf5b	88	77.863	ENSPPRG00000012903	SRSF5	92	78.626	Panthera_pardus
ENSPNAG00000011262	srsf5b	88	77.863	ENSPTIG00000018589	SRSF5	92	78.626	Panthera_tigris_altaica
ENSPNAG00000011262	srsf5b	88	77.099	ENSPTRG00000006488	SRSF5	92	78.626	Pan_troglodytes
ENSPNAG00000011262	srsf5b	88	77.099	ENSPANG00000021091	SRSF5	92	78.626	Papio_anubis
ENSPNAG00000011262	srsf5b	84	80.000	ENSPSIG00000012522	SRSF5	69	82.703	Pelodiscus_sinensis
ENSPNAG00000011262	srsf5b	84	94.488	ENSPMGG00000021646	srsf5b	91	93.750	Periophthalmus_magnuspinnatus
ENSPNAG00000011262	srsf5b	84	79.200	ENSPEMG00000020173	Srsf5	68	82.162	Peromyscus_maniculatus_bairdii
ENSPNAG00000011262	srsf5b	84	56.934	ENSPMAG00000007790	srsf5b	91	54.044	Petromyzon_marinus
ENSPNAG00000011262	srsf5b	84	78.400	ENSPCIG00000011877	SRSF5	68	82.703	Phascolarctos_cinereus
ENSPNAG00000011262	srsf5b	84	93.750	ENSPFOG00000017700	srsf5b	63	94.180	Poecilia_formosa
ENSPNAG00000011262	srsf5b	84	93.023	ENSPLAG00000006480	srsf5b	63	93.684	Poecilia_latipinna
ENSPNAG00000011262	srsf5b	100	88.816	ENSPMEG00000012751	srsf5b	100	89.474	Poecilia_mexicana
ENSPNAG00000011262	srsf5b	84	93.750	ENSPREG00000010381	srsf5b	63	93.651	Poecilia_reticulata
ENSPNAG00000011262	srsf5b	84	79.200	ENSPPYG00000005945	SRSF5	67	82.162	Pongo_abelii
ENSPNAG00000011262	srsf5b	84	77.600	ENSPCAG00000004405	SRSF5	100	81.879	Procavia_capensis
ENSPNAG00000011262	srsf5b	88	77.863	ENSPCOG00000014442	SRSF5	92	78.626	Propithecus_coquereli
ENSPNAG00000011262	srsf5b	84	93.750	ENSPNYG00000002669	srsf5b	94	93.750	Pundamilia_nyererei
ENSPNAG00000011262	srsf5b	84	79.200	ENSRNOG00000005513	Srsf5	68	82.162	Rattus_norvegicus
ENSPNAG00000011262	srsf5b	88	77.099	ENSRBIG00000013003	SRSF5	92	78.626	Rhinopithecus_bieti
ENSPNAG00000011262	srsf5b	88	77.099	ENSRROG00000043407	SRSF5	92	78.626	Rhinopithecus_roxellana
ENSPNAG00000011262	srsf5b	88	77.099	ENSSBOG00000030784	SRSF5	92	78.626	Saimiri_boliviensis_boliviensis
ENSPNAG00000011262	srsf5b	84	78.400	ENSSHAG00000002871	SRSF5	68	82.703	Sarcophilus_harrisii
ENSPNAG00000011262	srsf5b	84	82.270	ENSSMAG00000019728	srsf5b	63	86.139	Scophthalmus_maximus
ENSPNAG00000011262	srsf5b	84	93.750	ENSSDUG00000005766	srsf5b	66	93.651	Seriola_dumerili
ENSPNAG00000011262	srsf5b	100	86.184	ENSSLDG00000023255	srsf5b	100	89.474	Seriola_lalandi_dorsalis
ENSPNAG00000011262	srsf5b	70	72.527	ENSSARG00000001059	SRSF5	67	69.730	Sorex_araneus
ENSPNAG00000011262	srsf5b	88	77.372	ENSSPUG00000002464	SRSF5	93	74.286	Sphenodon_punctatus
ENSPNAG00000011262	srsf5b	84	93.750	ENSSPAG00000015325	srsf5b	100	76.632	Stegastes_partitus
ENSPNAG00000011262	srsf5b	84	79.200	ENSSSCG00000032583	SRSF5	67	82.162	Sus_scrofa
ENSPNAG00000011262	srsf5b	84	76.613	ENSTGUG00000011425	SRSF5	68	82.065	Taeniopygia_guttata
ENSPNAG00000011262	srsf5b	84	85.714	ENSTRUG00000017811	srsf5b	60	92.513	Takifugu_rubripes
ENSPNAG00000011262	srsf5b	84	83.333	ENSTNIG00000016411	srsf5b	68	91.444	Tetraodon_nigroviridis
ENSPNAG00000011262	srsf5b	84	81.600	ENSTBEG00000001972	SRSF5	66	80.000	Tupaia_belangeri
ENSPNAG00000011262	srsf5b	83	79.032	ENSTTRG00000003318	SRSF5	66	82.065	Tursiops_truncatus
ENSPNAG00000011262	srsf5b	84	79.200	ENSUAMG00000014184	SRSF5	67	82.162	Ursus_americanus
ENSPNAG00000011262	srsf5b	84	81.600	ENSUMAG00000009827	SRSF5	67	82.162	Ursus_maritimus
ENSPNAG00000011262	srsf5b	84	79.200	ENSVPAG00000006448	SRSF5	67	82.162	Vicugna_pacos
ENSPNAG00000011262	srsf5b	84	79.200	ENSVVUG00000003790	SRSF5	67	82.162	Vulpes_vulpes
ENSPNAG00000011262	srsf5b	84	79.839	ENSXETG00000002211	srsf5	68	83.152	Xenopus_tropicalis
ENSPNAG00000011262	srsf5b	84	93.023	ENSXCOG00000001570	srsf5b	91	74.532	Xiphophorus_couchianus
ENSPNAG00000011262	srsf5b	100	87.582	ENSXMAG00000026416	srsf5b	100	87.582	Xiphophorus_maculatus