EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000011323 (Gene tree)
Gene ID: 108427565
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 5981 bases
Position: chrKV575339.1:380287-386267
Accession: 108427565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000025928	dsrm	PF00035.26	1.1e-46	1	4
ENSPNAP00000025928	dsrm	PF00035.26	1.1e-46	2	4
ENSPNAP00000025928	dsrm	PF00035.26	1.1e-46	3	4
ENSPNAP00000025928	dsrm	PF00035.26	1.1e-46	4	4
ENSPNAP00000004838	dsrm	PF00035.26	1.8e-46	1	3
ENSPNAP00000004838	dsrm	PF00035.26	1.8e-46	2	3
ENSPNAP00000004838	dsrm	PF00035.26	1.8e-46	3	3
ENSPNAP00000004873	dsrm	PF00035.26	1.8e-46	1	3
ENSPNAP00000004873	dsrm	PF00035.26	1.8e-46	2	3
ENSPNAP00000004873	dsrm	PF00035.26	1.8e-46	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000006281	-	2070	-	ENSPNAP00000004873	689 (aa)	-	-
ENSPNAT00000006373	-	1926	-	ENSPNAP00000025928	641 (aa)	-	-
ENSPNAT00000006331	-	2073	XM_017697803	ENSPNAP00000004838	690 (aa)	XP_017553292	-

Gene Model

Click here to download ENSPNAG00000011323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000011323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000011323	stau1	96	47.840	ENSPNAG00000023606	stau2	96	45.866

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000011323	stau1	96	73.501	ENSG00000124214	STAU1	99	73.114	Homo_sapiens
ENSPNAG00000011323	stau1	100	80.288	ENSAPOG00000017260	stau1	100	79.568	Acanthochromis_polyacanthus
ENSPNAG00000011323	stau1	97	71.360	ENSAMEG00000013681	STAU1	98	67.479	Ailuropoda_melanoleuca
ENSPNAG00000011323	stau1	100	79.107	ENSACIG00000015918	stau1	100	79.827	Amphilophus_citrinellus
ENSPNAG00000011323	stau1	100	81.727	ENSAOCG00000012224	stau1	100	81.295	Amphiprion_ocellaris
ENSPNAG00000011323	stau1	100	81.871	ENSAPEG00000012308	stau1	100	81.439	Amphiprion_percula
ENSPNAG00000011323	stau1	100	80.973	ENSATEG00000024600	stau1	100	81.073	Anabas_testudineus
ENSPNAG00000011323	stau1	99	70.499	ENSAPLG00000010527	STAU1	99	69.903	Anas_platyrhynchos
ENSPNAG00000011323	stau1	99	72.238	ENSACAG00000015909	STAU1	99	71.671	Anolis_carolinensis
ENSPNAG00000011323	stau1	96	72.275	ENSANAG00000032714	STAU1	99	71.893	Aotus_nancymaae
ENSPNAG00000011323	stau1	100	80.687	ENSACLG00000012270	stau1	100	79.799	Astatotilapia_calliptera
ENSPNAG00000011323	stau1	93	89.403	ENSAMXG00000016812	stau1	98	88.825	Astyanax_mexicanus
ENSPNAG00000011323	stau1	96	72.534	ENSBTAG00000000241	STAU1	99	72.340	Bos_taurus
ENSPNAG00000011323	stau1	96	73.114	ENSCJAG00000016233	STAU1	99	72.727	Callithrix_jacchus
ENSPNAG00000011323	stau1	96	72.340	ENSCAFG00000011347	STAU1	97	72.147	Canis_familiaris
ENSPNAG00000011323	stau1	95	71.543	ENSCAFG00020017123	STAU1	99	71.545	Canis_lupus_dingo
ENSPNAG00000011323	stau1	96	71.760	ENSCHIG00000001799	-	99	71.567	Capra_hircus
ENSPNAG00000011323	stau1	96	72.727	ENSTSYG00000036179	-	88	72.481	Carlito_syrichta
ENSPNAG00000011323	stau1	78	71.032	ENSCAPG00000017041	STAU1	99	70.833	Cavia_aperea
ENSPNAG00000011323	stau1	77	68.787	ENSCPOG00000005566	STAU1	99	68.787	Cavia_porcellus
ENSPNAG00000011323	stau1	96	72.275	ENSCCAG00000034339	STAU1	99	71.893	Cebus_capucinus
ENSPNAG00000011323	stau1	96	74.255	ENSCATG00000028474	STAU1	99	73.830	Cercocebus_atys
ENSPNAG00000011323	stau1	77	72.167	ENSCLAG00000006516	-	99	72.167	Chinchilla_lanigera
ENSPNAG00000011323	stau1	77	59.356	ENSCLAG00000002784	-	99	59.356	Chinchilla_lanigera
ENSPNAG00000011323	stau1	78	73.214	ENSCSAG00000014986	STAU1	99	72.817	Chlorocebus_sabaeus
ENSPNAG00000011323	stau1	96	73.552	ENSCHOG00000001511	STAU1	99	73.114	Choloepus_hoffmanni
ENSPNAG00000011323	stau1	99	72.034	ENSCPBG00000026741	STAU1	100	71.671	Chrysemys_picta_bellii
ENSPNAG00000011323	stau1	96	73.501	ENSCANG00000039220	STAU1	99	73.114	Colobus_angolensis_palliatus
ENSPNAG00000011323	stau1	76	68.200	ENSCGRG00001013453	Stau1	99	68.200	Cricetulus_griseus_chok1gshd
ENSPNAG00000011323	stau1	76	68.200	ENSCGRG00000007216	Stau1	99	68.200	Cricetulus_griseus_crigri
ENSPNAG00000011323	stau1	100	69.188	ENSCSEG00000000792	stau1	100	69.285	Cynoglossus_semilaevis
ENSPNAG00000011323	stau1	94	73.398	ENSCVAG00000005906	stau1	100	74.951	Cyprinodon_variegatus
ENSPNAG00000011323	stau1	100	87.176	ENSDARG00000044182	stau1	100	88.889	Danio_rerio
ENSPNAG00000011323	stau1	96	73.308	ENSDNOG00000014933	STAU1	97	73.114	Dasypus_novemcinctus
ENSPNAG00000011323	stau1	77	71.227	ENSDORG00000030220	Stau1	99	71.227	Dipodomys_ordii
ENSPNAG00000011323	stau1	68	76.159	ENSETEG00000018235	STAU1	82	76.159	Echinops_telfairi
ENSPNAG00000011323	stau1	96	72.467	ENSEASG00005023343	STAU1	99	72.275	Equus_asinus_asinus
ENSPNAG00000011323	stau1	96	73.308	ENSECAG00000012894	STAU1	99	73.114	Equus_caballus
ENSPNAG00000011323	stau1	70	76.142	ENSEEUG00000014344	STAU1	68	75.888	Erinaceus_europaeus
ENSPNAG00000011323	stau1	99	79.858	ENSELUG00000002529	stau1	99	81.279	Esox_lucius
ENSPNAG00000011323	stau1	96	73.308	ENSFCAG00000001447	STAU1	99	73.114	Felis_catus
ENSPNAG00000011323	stau1	99	72.286	ENSFALG00000012940	STAU1	100	71.000	Ficedula_albicollis
ENSPNAG00000011323	stau1	77	71.769	ENSFDAG00000014119	-	99	71.769	Fukomys_damarensis
ENSPNAG00000011323	stau1	78	55.976	ENSFDAG00000020837	-	99	54.183	Fukomys_damarensis
ENSPNAG00000011323	stau1	99	77.110	ENSFHEG00000013517	stau1	100	76.402	Fundulus_heteroclitus
ENSPNAG00000011323	stau1	99	68.994	ENSGMOG00000016850	stau1	100	67.503	Gadus_morhua
ENSPNAG00000011323	stau1	99	72.857	ENSGALG00000004736	STAU1	99	71.674	Gallus_gallus
ENSPNAG00000011323	stau1	99	76.824	ENSGAFG00000010437	stau1	99	77.253	Gambusia_affinis
ENSPNAG00000011323	stau1	100	80.603	ENSGACG00000001352	stau1	100	79.856	Gasterosteus_aculeatus
ENSPNAG00000011323	stau1	99	72.792	ENSGAGG00000009825	STAU1	100	71.857	Gopherus_agassizii
ENSPNAG00000011323	stau1	96	68.053	ENSGGOG00000025351	STAU1	99	75.543	Gorilla_gorilla
ENSPNAG00000011323	stau1	100	80.830	ENSHBUG00000023668	stau1	100	79.943	Haplochromis_burtoni
ENSPNAG00000011323	stau1	77	72.837	ENSHGLG00000008730	STAU1	99	72.837	Heterocephalus_glaber_female
ENSPNAG00000011323	stau1	77	72.837	ENSHGLG00100000098	STAU1	99	72.837	Heterocephalus_glaber_male
ENSPNAG00000011323	stau1	100	75.536	ENSHCOG00000018461	stau1	100	73.963	Hippocampus_comes
ENSPNAG00000011323	stau1	100	86.957	ENSIPUG00000023725	stau1	100	86.522	Ictalurus_punctatus
ENSPNAG00000011323	stau1	77	71.919	ENSSTOG00000003634	STAU1	99	72.233	Ictidomys_tridecemlineatus
ENSPNAG00000011323	stau1	77	70.020	ENSJJAG00000020032	Stau1	99	70.624	Jaculus_jaculus
ENSPNAG00000011323	stau1	99	76.945	ENSKMAG00000007135	stau1	99	77.666	Kryptolebias_marmoratus
ENSPNAG00000011323	stau1	100	79.281	ENSLBEG00000020172	stau1	100	78.273	Labrus_bergylta
ENSPNAG00000011323	stau1	98	73.104	ENSLACG00000016157	STAU1	97	72.493	Latimeria_chalumnae
ENSPNAG00000011323	stau1	99	77.618	ENSLOCG00000003134	stau1	99	77.762	Lepisosteus_oculatus
ENSPNAG00000011323	stau1	80	73.256	ENSLAFG00000003238	STAU1	99	72.868	Loxodonta_africana
ENSPNAG00000011323	stau1	96	74.255	ENSMFAG00000040931	STAU1	99	76.667	Macaca_fascicularis
ENSPNAG00000011323	stau1	96	68.053	ENSMMUG00000002302	STAU1	99	76.667	Macaca_mulatta
ENSPNAG00000011323	stau1	96	73.319	ENSMNEG00000033821	STAU1	99	72.921	Macaca_nemestrina
ENSPNAG00000011323	stau1	96	73.308	ENSMLEG00000031383	STAU1	99	72.921	Mandrillus_leucophaeus
ENSPNAG00000011323	stau1	100	81.727	ENSMAMG00000017586	stau1	100	81.259	Mastacembelus_armatus
ENSPNAG00000011323	stau1	100	80.802	ENSMZEG00005015605	stau1	100	79.914	Maylandia_zebra
ENSPNAG00000011323	stau1	99	70.637	ENSMGAG00000004719	STAU1	99	70.042	Meleagris_gallopavo
ENSPNAG00000011323	stau1	76	68.400	ENSMAUG00000013846	Stau1	99	68.400	Mesocricetus_auratus
ENSPNAG00000011323	stau1	96	70.363	ENSMICG00000001995	STAU1	99	71.128	Microcebus_murinus
ENSPNAG00000011323	stau1	78	69.062	ENSMOCG00000018743	Stau1	99	69.200	Microtus_ochrogaster
ENSPNAG00000011323	stau1	100	77.666	ENSMMOG00000015455	stau1	100	78.261	Mola_mola
ENSPNAG00000011323	stau1	95	74.593	ENSMODG00000016276	STAU1	99	71.492	Monodelphis_domestica
ENSPNAG00000011323	stau1	100	80.719	ENSMALG00000000045	stau1	100	80.288	Monopterus_albus
ENSPNAG00000011323	stau1	76	69.433	MGP_CAROLIEiJ_G0024699	Stau1	100	69.293	Mus_caroli
ENSPNAG00000011323	stau1	76	69.433	ENSMUSG00000039536	Stau1	100	69.293	Mus_musculus
ENSPNAG00000011323	stau1	76	69.028	MGP_PahariEiJ_G0026141	Stau1	99	69.028	Mus_pahari
ENSPNAG00000011323	stau1	76	69.433	MGP_SPRETEiJ_G0025619	Stau1	100	69.293	Mus_spretus
ENSPNAG00000011323	stau1	95	72.459	ENSMPUG00000017581	STAU1	99	69.300	Mustela_putorius_furo
ENSPNAG00000011323	stau1	96	71.954	ENSMLUG00000008407	STAU1	97	71.760	Myotis_lucifugus
ENSPNAG00000011323	stau1	77	69.860	ENSNGAG00000007108	Stau1	99	70.179	Nannospalax_galili
ENSPNAG00000011323	stau1	100	80.830	ENSNBRG00000017596	stau1	100	79.943	Neolamprologus_brichardi
ENSPNAG00000011323	stau1	96	72.340	ENSNLEG00000006955	STAU1	99	72.921	Nomascus_leucogenys
ENSPNAG00000011323	stau1	75	76.395	ENSMEUG00000003263	STAU1	80	75.966	Notamacropus_eugenii
ENSPNAG00000011323	stau1	80	71.180	ENSOPRG00000014569	STAU1	89	71.180	Ochotona_princeps
ENSPNAG00000011323	stau1	78	72.222	ENSODEG00000006523	STAU1	99	72.222	Octodon_degus
ENSPNAG00000011323	stau1	100	78.720	ENSONIG00000004152	stau1	99	77.855	Oreochromis_niloticus
ENSPNAG00000011323	stau1	99	70.780	ENSOANG00000006394	STAU1	99	70.071	Ornithorhynchus_anatinus
ENSPNAG00000011323	stau1	96	72.147	ENSOCUG00000006214	STAU1	99	72.147	Oryctolagus_cuniculus
ENSPNAG00000011323	stau1	99	78.963	ENSOMEG00000002388	stau1	99	78.530	Oryzias_melastigma
ENSPNAG00000011323	stau1	96	73.114	ENSOGAG00000002127	STAU1	86	73.114	Otolemur_garnettii
ENSPNAG00000011323	stau1	77	51.600	ENSOGAG00000028222	-	99	51.394	Otolemur_garnettii
ENSPNAG00000011323	stau1	96	71.760	ENSOARG00000012204	STAU1	97	71.567	Ovis_aries
ENSPNAG00000011323	stau1	96	68.053	ENSPPAG00000032023	STAU1	99	75.543	Pan_paniscus
ENSPNAG00000011323	stau1	96	73.308	ENSPPRG00000003436	STAU1	99	73.114	Panthera_pardus
ENSPNAG00000011323	stau1	96	73.308	ENSPTIG00000011768	STAU1	99	73.114	Panthera_tigris_altaica
ENSPNAG00000011323	stau1	96	68.053	ENSPTRG00000023130	STAU1	99	75.543	Pan_troglodytes
ENSPNAG00000011323	stau1	96	74.255	ENSPANG00000020560	STAU1	99	73.830	Papio_anubis
ENSPNAG00000011323	stau1	100	78.663	ENSPKIG00000024588	stau1	100	79.403	Paramormyrops_kingsleyae
ENSPNAG00000011323	stau1	98	74.173	ENSPSIG00000010731	STAU1	99	72.246	Pelodiscus_sinensis
ENSPNAG00000011323	stau1	96	78.390	ENSPMGG00000018553	stau1	100	76.934	Periophthalmus_magnuspinnatus
ENSPNAG00000011323	stau1	76	69.000	ENSPEMG00000022045	Stau1	99	69.000	Peromyscus_maniculatus_bairdii
ENSPNAG00000011323	stau1	96	73.805	ENSPCIG00000023269	STAU1	99	72.830	Phascolarctos_cinereus
ENSPNAG00000011323	stau1	99	77.000	ENSPFOG00000017253	stau1	99	77.000	Poecilia_formosa
ENSPNAG00000011323	stau1	64	74.634	ENSPLAG00000014829	stau1	96	75.578	Poecilia_latipinna
ENSPNAG00000011323	stau1	99	74.245	ENSPMEG00000007495	stau1	99	74.245	Poecilia_mexicana
ENSPNAG00000011323	stau1	99	76.571	ENSPREG00000003477	stau1	99	76.571	Poecilia_reticulata
ENSPNAG00000011323	stau1	96	73.308	ENSPPYG00000011111	STAU1	99	72.921	Pongo_abelii
ENSPNAG00000011323	stau1	75	66.942	ENSPCAG00000002459	STAU1	99	65.567	Procavia_capensis
ENSPNAG00000011323	stau1	96	72.340	ENSPCOG00000027746	STAU1	99	72.340	Propithecus_coquereli
ENSPNAG00000011323	stau1	67	76.821	ENSPVAG00000015019	STAU1	81	76.821	Pteropus_vampyrus
ENSPNAG00000011323	stau1	100	80.830	ENSPNYG00000014436	stau1	100	79.943	Pundamilia_nyererei
ENSPNAG00000011323	stau1	76	68.600	ENSRNOG00000007781	Stau1	99	68.600	Rattus_norvegicus
ENSPNAG00000011323	stau1	78	72.584	ENSRBIG00000037345	STAU1	100	72.277	Rhinopithecus_bieti
ENSPNAG00000011323	stau1	96	73.319	ENSRROG00000039008	STAU1	99	72.921	Rhinopithecus_roxellana
ENSPNAG00000011323	stau1	96	72.275	ENSSBOG00000034448	STAU1	99	71.893	Saimiri_boliviensis_boliviensis
ENSPNAG00000011323	stau1	96	74.662	ENSSHAG00000009492	STAU1	97	74.275	Sarcophilus_harrisii
ENSPNAG00000011323	stau1	100	80.973	ENSSFOG00015021497	stau1	100	80.687	Scleropages_formosus
ENSPNAG00000011323	stau1	100	81.268	ENSSMAG00000017410	stau1	100	80.836	Scophthalmus_maximus
ENSPNAG00000011323	stau1	100	81.871	ENSSDUG00000019439	stau1	100	80.863	Seriola_dumerili
ENSPNAG00000011323	stau1	100	81.871	ENSSLDG00000025040	stau1	100	81.151	Seriola_lalandi_dorsalis
ENSPNAG00000011323	stau1	99	71.751	ENSSPUG00000017983	STAU1	99	72.083	Sphenodon_punctatus
ENSPNAG00000011323	stau1	100	81.439	ENSSPAG00000019275	stau1	100	81.295	Stegastes_partitus
ENSPNAG00000011323	stau1	96	72.534	ENSSSCG00000027444	STAU1	99	72.340	Sus_scrofa
ENSPNAG00000011323	stau1	95	74.677	ENSTGUG00000008784	STAU1	100	69.337	Taeniopygia_guttata
ENSPNAG00000011323	stau1	97	78.074	ENSTRUG00000005837	stau1	100	77.682	Takifugu_rubripes
ENSPNAG00000011323	stau1	97	77.071	ENSTNIG00000014732	stau1	99	76.672	Tetraodon_nigroviridis
ENSPNAG00000011323	stau1	96	62.863	ENSTBEG00000009404	STAU1	94	62.669	Tupaia_belangeri
ENSPNAG00000011323	stau1	72	71.674	ENSTTRG00000004285	STAU1	80	71.459	Tursiops_truncatus
ENSPNAG00000011323	stau1	78	71.429	ENSUAMG00000025449	STAU1	99	71.233	Ursus_americanus
ENSPNAG00000011323	stau1	59	69.509	ENSUMAG00000024475	STAU1	89	69.251	Ursus_maritimus
ENSPNAG00000011323	stau1	96	72.727	ENSVPAG00000001313	STAU1	99	71.760	Vicugna_pacos
ENSPNAG00000011323	stau1	95	71.704	ENSVVUG00000022325	STAU1	99	68.814	Vulpes_vulpes
ENSPNAG00000011323	stau1	99	69.559	ENSXETG00000001783	stau1	95	70.387	Xenopus_tropicalis
ENSPNAG00000011323	stau1	62	74.250	ENSXCOG00000008804	stau1	98	76.081	Xiphophorus_couchianus
ENSPNAG00000011323	stau1	99	76.967	ENSXMAG00000016175	stau1	99	76.967	Xiphophorus_maculatus