EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000011374 (Gene tree)
Gene ID: 108413731
Gene Symbol: smg7
Alias: fa99h10|wu:fa99h10
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 33871 bases
Position: chrKV576578.1:51776-85646
Accession: 108413731
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000026001	EST1	PF10374.9	7.1e-26	1	1
ENSPNAP00000004962	EST1	PF10374.9	7.4e-26	1	1
ENSPNAP00000004970	EST1	PF10374.9	7.9e-26	1	1
ENSPNAP00000004962	EST1_DNA_bind	PF10373.9	1.6e-50	1	1
ENSPNAP00000004970	EST1_DNA_bind	PF10373.9	1.7e-50	1	1
ENSPNAP00000026001	EST1_DNA_bind	PF10373.9	2.9e-39	1	2
ENSPNAP00000026001	EST1_DNA_bind	PF10373.9	2.9e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000006193	-	3291	-	ENSPNAP00000026001	1096 (aa)	-	-
ENSPNAT00000006116	-	6624	XM_017686380	ENSPNAP00000004962	1132 (aa)	XP_017541869	UPI00081462CA
ENSPNAT00000006093	-	6774	XM_017686378	ENSPNAP00000004970	1182 (aa)	XP_017541867	UPI000814467B

Gene Model

Click here to download ENSPNAG00000011374's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000011374's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000011374	smg7	98	69.697	ENSG00000116698	SMG7	86	94.340	Homo_sapiens
ENSPNAG00000011374	smg7	89	84.821	ENSAPOG00000009611	smg7	95	85.564	Acanthochromis_polyacanthus
ENSPNAG00000011374	smg7	99	67.448	ENSAMEG00000002357	SMG7	100	67.038	Ailuropoda_melanoleuca
ENSPNAG00000011374	smg7	97	72.890	ENSACIG00000015152	smg7	100	73.651	Amphilophus_citrinellus
ENSPNAG00000011374	smg7	100	78.607	ENSAOCG00000013538	smg7	100	77.990	Amphiprion_ocellaris
ENSPNAG00000011374	smg7	100	78.376	ENSAPEG00000007851	smg7	100	77.759	Amphiprion_percula
ENSPNAG00000011374	smg7	100	76.712	ENSATEG00000006931	smg7	100	77.634	Anabas_testudineus
ENSPNAG00000011374	smg7	99	68.604	ENSAPLG00000015811	SMG7	99	68.837	Anas_platyrhynchos
ENSPNAG00000011374	smg7	99	71.795	ENSACAG00000014989	SMG7	99	68.156	Anolis_carolinensis
ENSPNAG00000011374	smg7	98	70.202	ENSANAG00000028114	SMG7	88	92.593	Aotus_nancymaae
ENSPNAG00000011374	smg7	100	75.950	ENSACLG00000022079	smg7	100	75.957	Astatotilapia_calliptera
ENSPNAG00000011374	smg7	99	95.455	ENSAMXG00000020809	smg7	100	94.167	Astyanax_mexicanus
ENSPNAG00000011374	smg7	98	69.192	ENSBTAG00000008003	SMG7	99	68.111	Bos_taurus
ENSPNAG00000011374	smg7	98	72.222	ENSCJAG00000005135	SMG7	87	93.711	Callithrix_jacchus
ENSPNAG00000011374	smg7	98	69.192	ENSCAFG00000013276	SMG7	97	66.140	Canis_familiaris
ENSPNAG00000011374	smg7	98	69.192	ENSCAFG00020015475	SMG7	89	90.244	Canis_lupus_dingo
ENSPNAG00000011374	smg7	98	70.202	ENSCHIG00000018192	SMG7	99	66.750	Capra_hircus
ENSPNAG00000011374	smg7	98	71.212	ENSTSYG00000002667	SMG7	89	87.791	Carlito_syrichta
ENSPNAG00000011374	smg7	98	71.212	ENSCPOG00000008906	SMG7	99	65.886	Cavia_porcellus
ENSPNAG00000011374	smg7	99	68.398	ENSCCAG00000028596	SMG7	89	91.463	Cebus_capucinus
ENSPNAG00000011374	smg7	98	69.697	ENSCATG00000011063	SMG7	88	92.593	Cercocebus_atys
ENSPNAG00000011374	smg7	98	71.717	ENSCLAG00000010751	SMG7	99	68.021	Chinchilla_lanigera
ENSPNAG00000011374	smg7	98	70.202	ENSCSAG00000012654	SMG7	97	67.055	Chlorocebus_sabaeus
ENSPNAG00000011374	smg7	90	64.417	ENSCHOG00000010522	SMG7	93	59.819	Choloepus_hoffmanni
ENSPNAG00000011374	smg7	99	72.727	ENSCPBG00000015724	SMG7	99	69.569	Chrysemys_picta_bellii
ENSPNAG00000011374	smg7	99	68.288	ENSCANG00000015680	SMG7	88	91.975	Colobus_angolensis_palliatus
ENSPNAG00000011374	smg7	98	68.182	ENSCGRG00001013705	Smg7	99	67.558	Cricetulus_griseus_chok1gshd
ENSPNAG00000011374	smg7	98	68.182	ENSCGRG00000018401	Smg7	100	67.418	Cricetulus_griseus_crigri
ENSPNAG00000011374	smg7	92	81.726	ENSCVAG00000011842	smg7	100	81.726	Cyprinodon_variegatus
ENSPNAG00000011374	smg7	98	90.404	ENSDARG00000060767	smg7	100	86.256	Danio_rerio
ENSPNAG00000011374	smg7	98	69.192	ENSDORG00000007331	Smg7	99	66.945	Dipodomys_ordii
ENSPNAG00000011374	smg7	97	66.093	ENSETEG00000002654	SMG7	99	66.179	Echinops_telfairi
ENSPNAG00000011374	smg7	98	69.192	ENSEASG00005006524	SMG7	99	67.223	Equus_asinus_asinus
ENSPNAG00000011374	smg7	94	90.448	ENSECAG00000004313	SMG7	99	67.306	Equus_caballus
ENSPNAG00000011374	smg7	97	65.348	ENSEEUG00000002024	SMG7	94	65.434	Erinaceus_europaeus
ENSPNAG00000011374	smg7	98	84.653	ENSELUG00000010293	smg7	100	80.033	Esox_lucius
ENSPNAG00000011374	smg7	98	70.707	ENSFCAG00000010900	SMG7	99	66.555	Felis_catus
ENSPNAG00000011374	smg7	97	72.727	ENSFALG00000003047	SMG7	79	73.267	Ficedula_albicollis
ENSPNAG00000011374	smg7	98	68.687	ENSFDAG00000012121	SMG7	99	66.414	Fukomys_damarensis
ENSPNAG00000011374	smg7	100	73.730	ENSFHEG00000011073	smg7	100	73.253	Fundulus_heteroclitus
ENSPNAG00000011374	smg7	89	79.661	ENSGMOG00000004916	smg7	91	79.661	Gadus_morhua
ENSPNAG00000011374	smg7	99	68.772	ENSGALG00000004667	SMG7	99	69.291	Gallus_gallus
ENSPNAG00000011374	smg7	100	74.263	ENSGAFG00000019000	smg7	100	73.917	Gambusia_affinis
ENSPNAG00000011374	smg7	97	78.235	ENSGACG00000001634	smg7	99	69.558	Gasterosteus_aculeatus
ENSPNAG00000011374	smg7	98	69.192	ENSGGOG00000002342	SMG7	81	94.304	Gorilla_gorilla
ENSPNAG00000011374	smg7	100	76.033	ENSHBUG00000003726	smg7	100	75.957	Haplochromis_burtoni
ENSPNAG00000011374	smg7	99	67.761	ENSHGLG00000009353	SMG7	99	67.934	Heterocephalus_glaber_female
ENSPNAG00000011374	smg7	99	60.935	ENSHGLG00100004878	-	99	60.935	Heterocephalus_glaber_male
ENSPNAG00000011374	smg7	99	67.675	ENSHGLG00100009637	-	99	67.848	Heterocephalus_glaber_male
ENSPNAG00000011374	smg7	100	89.443	ENSIPUG00000016997	smg7	100	89.105	Ictalurus_punctatus
ENSPNAG00000011374	smg7	98	70.707	ENSSTOG00000000401	SMG7	99	67.473	Ictidomys_tridecemlineatus
ENSPNAG00000011374	smg7	98	70.707	ENSJJAG00000012351	Smg7	99	66.611	Jaculus_jaculus
ENSPNAG00000011374	smg7	91	77.670	ENSKMAG00000004900	smg7	100	70.667	Kryptolebias_marmoratus
ENSPNAG00000011374	smg7	99	76.298	ENSLBEG00000002983	smg7	99	76.603	Labrus_bergylta
ENSPNAG00000011374	smg7	52	71.812	ENSLBEG00000005220	-	75	71.812	Labrus_bergylta
ENSPNAG00000011374	smg7	99	73.632	ENSLACG00000000972	SMG7	99	70.944	Latimeria_chalumnae
ENSPNAG00000011374	smg7	99	80.597	ENSLOCG00000002010	smg7	93	80.597	Lepisosteus_oculatus
ENSPNAG00000011374	smg7	98	69.697	ENSLAFG00000008186	SMG7	99	67.113	Loxodonta_africana
ENSPNAG00000011374	smg7	98	69.697	ENSMFAG00000031653	SMG7	88	92.593	Macaca_fascicularis
ENSPNAG00000011374	smg7	98	69.697	ENSMMUG00000018458	SMG7	99	67.720	Macaca_mulatta
ENSPNAG00000011374	smg7	99	68.111	ENSMNEG00000034798	SMG7	88	92.593	Macaca_nemestrina
ENSPNAG00000011374	smg7	98	69.697	ENSMLEG00000037170	SMG7	100	67.808	Mandrillus_leucophaeus
ENSPNAG00000011374	smg7	88	76.720	ENSMAMG00000018733	smg7	86	76.244	Mastacembelus_armatus
ENSPNAG00000011374	smg7	100	76.033	ENSMZEG00005015247	smg7	100	75.874	Maylandia_zebra
ENSPNAG00000011374	smg7	97	67.848	ENSMGAG00000001561	SMG7	99	68.815	Meleagris_gallopavo
ENSPNAG00000011374	smg7	98	68.687	ENSMAUG00000019484	Smg7	99	67.386	Mesocricetus_auratus
ENSPNAG00000011374	smg7	98	69.192	ENSMICG00000007145	SMG7	85	92.121	Microcebus_murinus
ENSPNAG00000011374	smg7	99	66.811	ENSMOCG00000020748	Smg7	99	66.898	Microtus_ochrogaster
ENSPNAG00000011374	smg7	99	73.588	ENSMMOG00000001524	smg7	99	73.890	Mola_mola
ENSPNAG00000011374	smg7	92	67.636	ENSMODG00000007139	SMG7	99	67.540	Monodelphis_domestica
ENSPNAG00000011374	smg7	95	82.323	ENSMALG00000000061	smg7	93	82.828	Monopterus_albus
ENSPNAG00000011374	smg7	98	68.182	MGP_CAROLIEiJ_G0014704	Smg7	99	67.244	Mus_caroli
ENSPNAG00000011374	smg7	98	68.182	ENSMUSG00000042772	Smg7	99	67.244	Mus_musculus
ENSPNAG00000011374	smg7	99	66.898	MGP_PahariEiJ_G0027940	Smg7	99	67.418	Mus_pahari
ENSPNAG00000011374	smg7	98	68.182	MGP_SPRETEiJ_G0015511	Smg7	99	67.331	Mus_spretus
ENSPNAG00000011374	smg7	97	69.697	ENSMPUG00000011732	SMG7	97	66.160	Mustela_putorius_furo
ENSPNAG00000011374	smg7	98	68.182	ENSMLUG00000015417	SMG7	99	66.472	Myotis_lucifugus
ENSPNAG00000011374	smg7	100	67.241	ENSNGAG00000009836	Smg7	100	67.328	Nannospalax_galili
ENSPNAG00000011374	smg7	98	69.983	ENSNBRG00000024343	smg7	99	69.876	Neolamprologus_brichardi
ENSPNAG00000011374	smg7	98	69.697	ENSNLEG00000018018	SMG7	100	67.808	Nomascus_leucogenys
ENSPNAG00000011374	smg7	71	65.854	ENSMEUG00000004681	SMG7	73	65.854	Notamacropus_eugenii
ENSPNAG00000011374	smg7	96	60.603	ENSOPRG00000013942	SMG7	96	61.465	Ochotona_princeps
ENSPNAG00000011374	smg7	98	71.717	ENSODEG00000010390	SMG7	99	68.107	Octodon_degus
ENSPNAG00000011374	smg7	100	75.904	ENSONIG00000000277	smg7	100	75.563	Oreochromis_niloticus
ENSPNAG00000011374	smg7	96	70.707	ENSOANG00000000994	SMG7	100	66.667	Ornithorhynchus_anatinus
ENSPNAG00000011374	smg7	99	64.047	ENSOCUG00000005887	SMG7	92	64.130	Oryctolagus_cuniculus
ENSPNAG00000011374	smg7	100	73.561	ENSORLG00000007314	smg7	100	73.601	Oryzias_latipes
ENSPNAG00000011374	smg7	100	73.645	ENSORLG00020015779	smg7	100	73.684	Oryzias_latipes_hni
ENSPNAG00000011374	smg7	100	74.062	ENSORLG00015012289	smg7	100	73.517	Oryzias_latipes_hsok
ENSPNAG00000011374	smg7	100	73.978	ENSOMEG00000002328	smg7	100	73.768	Oryzias_melastigma
ENSPNAG00000011374	smg7	97	65.491	ENSOGAG00000003107	SMG7	93	65.491	Otolemur_garnettii
ENSPNAG00000011374	smg7	98	69.697	ENSOARG00000001352	SMG7	100	66.989	Ovis_aries
ENSPNAG00000011374	smg7	99	68.398	ENSPPAG00000031619	SMG7	87	93.750	Pan_paniscus
ENSPNAG00000011374	smg7	98	70.707	ENSPPRG00000011222	SMG7	99	67.965	Panthera_pardus
ENSPNAG00000011374	smg7	95	70.707	ENSPTIG00000007242	SMG7	100	67.038	Panthera_tigris_altaica
ENSPNAG00000011374	smg7	99	68.398	ENSPTRG00000001764	SMG7	88	92.593	Pan_troglodytes
ENSPNAG00000011374	smg7	98	69.697	ENSPANG00000004520	SMG7	99	68.658	Papio_anubis
ENSPNAG00000011374	smg7	100	75.378	ENSPKIG00000007242	smg7	100	75.378	Paramormyrops_kingsleyae
ENSPNAG00000011374	smg7	97	72.727	ENSPSIG00000012201	SMG7	100	68.421	Pelodiscus_sinensis
ENSPNAG00000011374	smg7	70	49.132	ENSPMGG00000021833	smg7	76	56.296	Periophthalmus_magnuspinnatus
ENSPNAG00000011374	smg7	98	67.677	ENSPEMG00000011315	Smg7	99	66.288	Peromyscus_maniculatus_bairdii
ENSPNAG00000011374	smg7	98	71.717	ENSPCIG00000003786	SMG7	89	93.750	Phascolarctos_cinereus
ENSPNAG00000011374	smg7	98	78.680	ENSPFOG00000019219	smg7	100	74.503	Poecilia_formosa
ENSPNAG00000011374	smg7	100	74.892	ENSPLAG00000001446	smg7	100	74.805	Poecilia_latipinna
ENSPNAG00000011374	smg7	97	74.240	ENSPMEG00000005218	smg7	99	74.150	Poecilia_mexicana
ENSPNAG00000011374	smg7	88	71.780	ENSPREG00000019039	smg7	92	71.632	Poecilia_reticulata
ENSPNAG00000011374	smg7	99	68.398	ENSPPYG00000000427	SMG7	99	68.658	Pongo_abelii
ENSPNAG00000011374	smg7	89	75.219	ENSPCAG00000008360	SMG7	88	75.219	Procavia_capensis
ENSPNAG00000011374	smg7	98	69.697	ENSPCOG00000011996	SMG7	80	92.121	Propithecus_coquereli
ENSPNAG00000011374	smg7	89	71.287	ENSPVAG00000000851	SMG7	89	62.329	Pteropus_vampyrus
ENSPNAG00000011374	smg7	100	76.325	ENSPNYG00000007643	smg7	100	76.167	Pundamilia_nyererei
ENSPNAG00000011374	smg7	98	70.352	ENSRNOG00000027962	Smg7	100	69.059	Rattus_norvegicus
ENSPNAG00000011374	smg7	98	69.697	ENSRBIG00000036316	SMG7	100	67.808	Rhinopithecus_bieti
ENSPNAG00000011374	smg7	98	69.697	ENSRROG00000035719	SMG7	100	67.808	Rhinopithecus_roxellana
ENSPNAG00000011374	smg7	98	69.697	ENSSBOG00000023454	SMG7	86	94.340	Saimiri_boliviensis_boliviensis
ENSPNAG00000011374	smg7	100	67.271	ENSSHAG00000013147	SMG7	99	67.650	Sarcophilus_harrisii
ENSPNAG00000011374	smg7	100	78.841	ENSSFOG00015017252	smg7	100	78.571	Scleropages_formosus
ENSPNAG00000011374	smg7	100	75.770	ENSSMAG00000006067	smg7	100	76.353	Scophthalmus_maximus
ENSPNAG00000011374	smg7	95	84.232	ENSSDUG00000017543	smg7	100	77.425	Seriola_dumerili
ENSPNAG00000011374	smg7	99	68.426	ENSSPUG00000002064	SMG7	99	68.166	Sphenodon_punctatus
ENSPNAG00000011374	smg7	99	75.304	ENSSPAG00000008733	smg7	99	75.784	Stegastes_partitus
ENSPNAG00000011374	smg7	98	70.707	ENSSSCG00000015558	SMG7	99	67.537	Sus_scrofa
ENSPNAG00000011374	smg7	99	68.115	ENSTGUG00000003928	SMG7	100	68.897	Taeniopygia_guttata
ENSPNAG00000011374	smg7	98	74.384	ENSTNIG00000002802	smg7	80	75.441	Tetraodon_nigroviridis
ENSPNAG00000011374	smg7	78	68.571	ENSTBEG00000003220	SMG7	75	68.571	Tupaia_belangeri
ENSPNAG00000011374	smg7	96	65.630	ENSTTRG00000014778	SMG7	94	65.976	Tursiops_truncatus
ENSPNAG00000011374	smg7	96	65.468	ENSUAMG00000017473	SMG7	100	65.827	Ursus_americanus
ENSPNAG00000011374	smg7	95	69.192	ENSUMAG00000016389	SMG7	100	65.835	Ursus_maritimus
ENSPNAG00000011374	smg7	98	69.192	ENSVVUG00000008976	SMG7	99	66.580	Vulpes_vulpes
ENSPNAG00000011374	smg7	99	61.750	ENSXETG00000012528	smg7	99	61.440	Xenopus_tropicalis
ENSPNAG00000011374	smg7	100	74.719	ENSXMAG00000007123	smg7	100	74.372	Xiphophorus_maculatus