EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000011705 (Gene tree)
Gene ID: 108435156
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 239-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 5233 bases
Position: chrKV575292.1:7501951-7507183
Accession: 108435156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000026425	zf-C2H2	PF00096.26	2.8e-13	1	3
ENSPNAP00000026425	zf-C2H2	PF00096.26	2.8e-13	2	3
ENSPNAP00000026425	zf-C2H2	PF00096.26	2.8e-13	3	3
ENSPNAP00000026425	zf-met	PF12874.7	9.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000005193	-	4019	XM_017710780	ENSPNAP00000026425	353 (aa)	XP_017566269	-

Gene Model

Click here to download ENSPNAG00000011705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000011705's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000011705	-	52	50.602	ENSPNAG00000002287	-	82	50.602
ENSPNAG00000011705	-	52	43.158	ENSPNAG00000009176	-	91	43.158
ENSPNAG00000011705	-	50	43.220	ENSPNAG00000018644	-	98	43.220
ENSPNAG00000011705	-	52	42.424	ENSPNAG00000012206	-	98	42.424
ENSPNAG00000011705	-	67	42.424	ENSPNAG00000017479	-	75	42.424
ENSPNAG00000011705	-	63	44.231	ENSPNAG00000017138	znf236	97	42.424
ENSPNAG00000011705	-	58	49.398	ENSPNAG00000002209	-	90	49.398
ENSPNAG00000011705	-	91	47.112	ENSPNAG00000011679	-	98	47.112
ENSPNAG00000011705	-	61	46.226	ENSPNAG00000002244	-	97	46.226
ENSPNAG00000011705	-	73	34.483	ENSPNAG00000017222	patz1	56	34.483
ENSPNAG00000011705	-	60	39.683	ENSPNAG00000010752	-	82	46.154
ENSPNAG00000011705	-	50	41.176	ENSPNAG00000007265	-	88	41.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000011705	-	92	44.068	ENSAPOG00000021966	-	99	44.068	Acanthochromis_polyacanthus
ENSPNAG00000011705	-	50	39.450	ENSACIG00000006228	-	88	39.450	Amphilophus_citrinellus
ENSPNAG00000011705	-	92	37.079	ENSAOCG00000001971	-	99	37.079	Amphiprion_ocellaris
ENSPNAG00000011705	-	93	45.679	ENSAOCG00000022836	-	99	30.088	Amphiprion_ocellaris
ENSPNAG00000011705	-	92	45.763	ENSAOCG00000022529	-	100	45.763	Amphiprion_ocellaris
ENSPNAG00000011705	-	93	45.679	ENSAPEG00000003776	-	99	45.679	Amphiprion_percula
ENSPNAG00000011705	-	94	37.079	ENSAPEG00000011156	-	87	37.079	Amphiprion_percula
ENSPNAG00000011705	-	60	43.373	ENSATEG00000014684	-	96	43.373	Anabas_testudineus
ENSPNAG00000011705	-	54	41.000	ENSACLG00000001368	-	88	41.000	Astatotilapia_calliptera
ENSPNAG00000011705	-	92	42.373	ENSACLG00000008374	-	100	42.373	Astatotilapia_calliptera
ENSPNAG00000011705	-	58	32.258	ENSAMXG00000034934	-	88	30.159	Astyanax_mexicanus
ENSPNAG00000011705	-	56	40.000	ENSAMXG00000007973	-	90	40.952	Astyanax_mexicanus
ENSPNAG00000011705	-	50	48.148	ENSCVAG00000021152	-	67	48.148	Cyprinodon_variegatus
ENSPNAG00000011705	-	52	44.118	ENSELUG00000004677	-	59	44.118	Esox_lucius
ENSPNAG00000011705	-	61	41.667	ENSFHEG00000003460	-	77	42.222	Fundulus_heteroclitus
ENSPNAG00000011705	-	62	40.909	ENSGAFG00000001481	-	89	40.909	Gambusia_affinis
ENSPNAG00000011705	-	91	34.524	ENSGAFG00000000549	-	98	34.524	Gambusia_affinis
ENSPNAG00000011705	-	92	42.373	ENSHBUG00000017924	-	100	42.373	Haplochromis_burtoni
ENSPNAG00000011705	-	50	35.185	ENSHBUG00000009274	-	93	35.185	Haplochromis_burtoni
ENSPNAG00000011705	-	92	31.024	ENSKMAG00000017903	-	99	31.024	Kryptolebias_marmoratus
ENSPNAG00000011705	-	92	38.961	ENSLBEG00000008850	-	100	38.961	Labrus_bergylta
ENSPNAG00000011705	-	50	40.769	ENSLOCG00000017422	-	77	40.769	Lepisosteus_oculatus
ENSPNAG00000011705	-	92	42.373	ENSMZEG00005011431	-	98	46.154	Maylandia_zebra
ENSPNAG00000011705	-	58	32.323	ENSMMOG00000005437	-	72	32.323	Mola_mola
ENSPNAG00000011705	-	91	44.068	ENSMALG00000005696	-	99	37.143	Monopterus_albus
ENSPNAG00000011705	-	91	37.113	ENSMALG00000012840	-	98	37.113	Monopterus_albus
ENSPNAG00000011705	-	92	44.068	ENSNBRG00000004792	-	100	44.068	Neolamprologus_brichardi
ENSPNAG00000011705	-	50	43.243	ENSNBRG00000004723	-	83	39.130	Neolamprologus_brichardi
ENSPNAG00000011705	-	52	45.055	ENSONIG00000020667	-	97	45.055	Oreochromis_niloticus
ENSPNAG00000011705	-	51	40.659	ENSORLG00000012581	-	62	40.659	Oryzias_latipes
ENSPNAG00000011705	-	91	30.220	ENSPMGG00000011591	-	99	30.220	Periophthalmus_magnuspinnatus
ENSPNAG00000011705	-	91	43.396	ENSPMGG00000001672	-	93	45.098	Periophthalmus_magnuspinnatus
ENSPNAG00000011705	-	64	44.304	ENSPFOG00000000667	-	80	44.304	Poecilia_formosa
ENSPNAG00000011705	-	76	41.538	ENSPLAG00000013745	-	83	45.070	Poecilia_latipinna
ENSPNAG00000011705	-	92	42.373	ENSPNYG00000016157	-	100	42.373	Pundamilia_nyererei
ENSPNAG00000011705	-	93	44.030	ENSSFOG00015006083	-	92	44.030	Scleropages_formosus
ENSPNAG00000011705	-	52	47.748	ENSSMAG00000013663	-	86	52.381	Scophthalmus_maximus
ENSPNAG00000011705	-	91	30.091	ENSSMAG00000006902	-	99	30.091	Scophthalmus_maximus
ENSPNAG00000011705	-	91	35.897	ENSSMAG00000006155	-	97	43.269	Scophthalmus_maximus
ENSPNAG00000011705	-	56	47.368	ENSSDUG00000023764	-	95	43.810	Seriola_dumerili
ENSPNAG00000011705	-	92	45.763	ENSSDUG00000022035	-	99	45.763	Seriola_dumerili
ENSPNAG00000011705	-	92	45.763	ENSSLDG00000025676	-	99	45.763	Seriola_lalandi_dorsalis
ENSPNAG00000011705	-	92	38.372	ENSTRUG00000021167	-	98	36.782	Takifugu_rubripes
ENSPNAG00000011705	-	91	42.169	ENSTRUG00000024009	-	100	42.169	Takifugu_rubripes