EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000011708 (Gene tree)
Gene ID: 108438040
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 10446 bases
Position: chrKV575542.1:265286-275731
Accession: 108438040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000005500	RRM_1	PF00076.22	1e-08	1	1
ENSPNAP00000026402	RRM_1	PF00076.22	1e-08	1	1
ENSPNAP00000005500	RRM_3	PF08777.11	7.3e-27	1	1
ENSPNAP00000026402	RRM_3	PF08777.11	7.3e-27	1	1
ENSPNAP00000005500	La	PF05383.17	6.7e-20	1	1
ENSPNAP00000026402	La	PF05383.17	6.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000005201	-	2695	XM_017715545	ENSPNAP00000026402	406 (aa)	XP_017571034	UPI0008143724
ENSPNAT00000005184	-	3132	XM_017715544	ENSPNAP00000005500	406 (aa)	XP_017571033	UPI0008143724

Gene Model

Click here to download ENSPNAG00000011708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000011708's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000011708	ssb	100	57.561	ENSG00000138385	SSB	98	63.248	Homo_sapiens
ENSPNAG00000011708	ssb	100	62.836	ENSAPOG00000003448	ssb	100	63.325	Acanthochromis_polyacanthus
ENSPNAG00000011708	ssb	100	55.660	ENSAMEG00000010507	SSB	98	54.762	Ailuropoda_melanoleuca
ENSPNAG00000011708	ssb	90	63.686	ENSACIG00000001738	ssb	84	76.522	Amphilophus_citrinellus
ENSPNAG00000011708	ssb	100	64.059	ENSAOCG00000020398	ssb	100	63.325	Amphiprion_ocellaris
ENSPNAG00000011708	ssb	100	64.303	ENSAPEG00000020395	ssb	100	63.325	Amphiprion_percula
ENSPNAG00000011708	ssb	100	64.878	ENSATEG00000016884	ssb	100	64.634	Anabas_testudineus
ENSPNAG00000011708	ssb	100	54.567	ENSAPLG00000006109	SSB	98	53.095	Anas_platyrhynchos
ENSPNAG00000011708	ssb	100	55.961	ENSACAG00000017008	SSB	97	54.975	Anolis_carolinensis
ENSPNAG00000011708	ssb	100	51.951	ENSANAG00000027195	-	98	50.000	Aotus_nancymaae
ENSPNAG00000011708	ssb	100	57.598	ENSACLG00000010798	ssb	86	61.656	Astatotilapia_calliptera
ENSPNAG00000011708	ssb	100	84.390	ENSAMXG00000012606	ssb	100	84.634	Astyanax_mexicanus
ENSPNAG00000011708	ssb	100	57.282	ENSBTAG00000008716	SSB	98	56.158	Bos_taurus
ENSPNAG00000011708	ssb	69	34.155	WBGene00016653	C44E4.4	76	36.601	Caenorhabditis_elegans
ENSPNAG00000011708	ssb	100	56.829	ENSCJAG00000045073	SSB	98	55.665	Callithrix_jacchus
ENSPNAG00000011708	ssb	100	57.767	ENSCAFG00000012418	SSB	98	57.143	Canis_familiaris
ENSPNAG00000011708	ssb	100	57.767	ENSCAFG00020002900	SSB	98	57.143	Canis_lupus_dingo
ENSPNAG00000011708	ssb	100	53.790	ENSCHIG00000022196	-	82	58.333	Capra_hircus
ENSPNAG00000011708	ssb	100	57.767	ENSCHIG00000022624	-	98	56.650	Capra_hircus
ENSPNAG00000011708	ssb	99	57.664	ENSTSYG00000000097	SSB	98	56.543	Carlito_syrichta
ENSPNAG00000011708	ssb	100	58.252	ENSCPOG00000003338	SSB	98	57.143	Cavia_porcellus
ENSPNAG00000011708	ssb	100	57.317	ENSCCAG00000035147	SSB	98	57.143	Cebus_capucinus
ENSPNAG00000011708	ssb	99	44.335	ENSCATG00000042909	-	98	43.842	Cercocebus_atys
ENSPNAG00000011708	ssb	72	56.610	ENSCATG00000036701	SSB	83	56.610	Cercocebus_atys
ENSPNAG00000011708	ssb	100	57.524	ENSCLAG00000015617	-	98	56.404	Chinchilla_lanigera
ENSPNAG00000011708	ssb	100	57.561	ENSCSAG00000015200	SSB	87	57.389	Chlorocebus_sabaeus
ENSPNAG00000011708	ssb	99	52.826	ENSCSAG00000018390	-	99	52.369	Chlorocebus_sabaeus
ENSPNAG00000011708	ssb	100	57.767	ENSCHOG00000007763	SSB	98	56.650	Choloepus_hoffmanni
ENSPNAG00000011708	ssb	100	60.488	ENSCPBG00000006519	SSB	98	60.345	Chrysemys_picta_bellii
ENSPNAG00000011708	ssb	97	46.500	ENSCANG00000028838	-	94	45.750	Colobus_angolensis_palliatus
ENSPNAG00000011708	ssb	100	50.971	ENSCANG00000033240	-	98	50.493	Colobus_angolensis_palliatus
ENSPNAG00000011708	ssb	100	57.561	ENSCANG00000027695	SSB	98	57.389	Colobus_angolensis_palliatus
ENSPNAG00000011708	ssb	100	50.704	ENSCGRG00001024831	Ssb	98	51.582	Cricetulus_griseus_chok1gshd
ENSPNAG00000011708	ssb	100	50.704	ENSCGRG00000005387	Ssb	98	51.582	Cricetulus_griseus_crigri
ENSPNAG00000011708	ssb	100	61.125	ENSCSEG00000011599	ssb	100	60.880	Cynoglossus_semilaevis
ENSPNAG00000011708	ssb	100	60.386	ENSCVAG00000021558	ssb	100	61.314	Cyprinodon_variegatus
ENSPNAG00000011708	ssb	100	77.833	ENSDARG00000029252	ssb	100	77.340	Danio_rerio
ENSPNAG00000011708	ssb	100	58.010	ENSDNOG00000013450	SSB	98	56.897	Dasypus_novemcinctus
ENSPNAG00000011708	ssb	100	52.038	ENSDORG00000005543	Ssb	98	51.214	Dipodomys_ordii
ENSPNAG00000011708	ssb	83	33.714	FBgn0011638	La	66	35.821	Drosophila_melanogaster
ENSPNAG00000011708	ssb	95	46.939	ENSEBUG00000001237	ssb	92	47.645	Eptatretus_burgeri
ENSPNAG00000011708	ssb	100	57.767	ENSEASG00005022835	SSB	98	57.143	Equus_asinus_asinus
ENSPNAG00000011708	ssb	100	57.767	ENSECAG00000018495	SSB	98	57.143	Equus_caballus
ENSPNAG00000011708	ssb	75	46.580	ENSEEUG00000008077	SSB	77	46.535	Erinaceus_europaeus
ENSPNAG00000011708	ssb	100	66.339	ENSELUG00000020929	ssb	100	68.550	Esox_lucius
ENSPNAG00000011708	ssb	100	58.010	ENSFCAG00000011601	SSB	98	57.389	Felis_catus
ENSPNAG00000011708	ssb	99	56.968	ENSFALG00000000930	SSB	99	56.235	Ficedula_albicollis
ENSPNAG00000011708	ssb	100	58.252	ENSFDAG00000000598	SSB	98	57.143	Fukomys_damarensis
ENSPNAG00000011708	ssb	73	57.616	ENSFHEG00000003268	ssb	92	56.667	Fundulus_heteroclitus
ENSPNAG00000011708	ssb	99	57.317	ENSGMOG00000002664	ssb	79	63.208	Gadus_morhua
ENSPNAG00000011708	ssb	99	57.317	ENSGALG00000009677	SSB	97	56.219	Gallus_gallus
ENSPNAG00000011708	ssb	100	60.244	ENSGAFG00000002749	ssb	100	61.951	Gambusia_affinis
ENSPNAG00000011708	ssb	100	58.234	ENSGACG00000005107	ssb	100	56.490	Gasterosteus_aculeatus
ENSPNAG00000011708	ssb	100	60.000	ENSGAGG00000007807	SSB	98	59.852	Gopherus_agassizii
ENSPNAG00000011708	ssb	100	49.029	ENSGGOG00000024891	-	97	48.635	Gorilla_gorilla
ENSPNAG00000011708	ssb	55	56.195	ENSGGOG00000023471	-	91	54.425	Gorilla_gorilla
ENSPNAG00000011708	ssb	100	58.088	ENSHBUG00000006584	ssb	83	64.526	Haplochromis_burtoni
ENSPNAG00000011708	ssb	100	57.416	ENSHGLG00000017580	-	98	55.932	Heterocephalus_glaber_female
ENSPNAG00000011708	ssb	99	53.202	ENSHGLG00000004478	-	98	52.206	Heterocephalus_glaber_female
ENSPNAG00000011708	ssb	94	53.728	ENSHGLG00000005832	-	92	53.315	Heterocephalus_glaber_female
ENSPNAG00000011708	ssb	100	51.456	ENSHGLG00100008767	-	98	50.000	Heterocephalus_glaber_male
ENSPNAG00000011708	ssb	100	57.416	ENSHGLG00100003084	-	98	55.932	Heterocephalus_glaber_male
ENSPNAG00000011708	ssb	99	56.824	ENSHCOG00000019011	ssb	99	56.824	Hippocampus_comes
ENSPNAG00000011708	ssb	100	84.804	ENSIPUG00000003681	SSB	100	84.069	Ictalurus_punctatus
ENSPNAG00000011708	ssb	100	58.151	ENSSTOG00000008416	SSB	98	56.650	Ictidomys_tridecemlineatus
ENSPNAG00000011708	ssb	90	46.575	ENSJJAG00000016250	-	94	45.479	Jaculus_jaculus
ENSPNAG00000011708	ssb	100	51.981	ENSJJAG00000023158	-	78	58.663	Jaculus_jaculus
ENSPNAG00000011708	ssb	100	63.659	ENSKMAG00000017317	ssb	100	63.659	Kryptolebias_marmoratus
ENSPNAG00000011708	ssb	100	63.325	ENSLBEG00000017345	ssb	100	63.081	Labrus_bergylta
ENSPNAG00000011708	ssb	99	56.468	ENSLACG00000014056	SSB	97	56.468	Latimeria_chalumnae
ENSPNAG00000011708	ssb	99	65.099	ENSLOCG00000007933	ssb	98	64.851	Lepisosteus_oculatus
ENSPNAG00000011708	ssb	100	49.512	ENSLAFG00000028909	-	99	48.655	Loxodonta_africana
ENSPNAG00000011708	ssb	73	44.108	ENSLAFG00000026721	-	97	44.108	Loxodonta_africana
ENSPNAG00000011708	ssb	90	55.556	ENSLAFG00000000867	-	98	53.081	Loxodonta_africana
ENSPNAG00000011708	ssb	87	51.811	ENSMFAG00000041478	-	90	52.615	Macaca_fascicularis
ENSPNAG00000011708	ssb	100	57.561	ENSMFAG00000039066	SSB	98	57.389	Macaca_fascicularis
ENSPNAG00000011708	ssb	99	41.667	ENSMMUG00000039889	-	98	42.118	Macaca_mulatta
ENSPNAG00000011708	ssb	100	49.757	ENSMMUG00000011724	-	96	48.030	Macaca_mulatta
ENSPNAG00000011708	ssb	100	57.561	ENSMMUG00000023051	SSB	98	57.389	Macaca_mulatta
ENSPNAG00000011708	ssb	100	49.268	ENSMNEG00000028321	SSB	98	48.030	Macaca_nemestrina
ENSPNAG00000011708	ssb	87	51.811	ENSMNEG00000034698	-	90	52.615	Macaca_nemestrina
ENSPNAG00000011708	ssb	100	57.561	ENSMLEG00000035717	SSB	98	57.389	Mandrillus_leucophaeus
ENSPNAG00000011708	ssb	100	41.748	ENSMLEG00000042644	-	78	42.462	Mandrillus_leucophaeus
ENSPNAG00000011708	ssb	100	62.439	ENSMAMG00000004800	ssb	100	62.195	Mastacembelus_armatus
ENSPNAG00000011708	ssb	100	57.598	ENSMZEG00005005749	ssb	86	61.656	Maylandia_zebra
ENSPNAG00000011708	ssb	99	56.829	ENSMGAG00000010328	SSB	100	60.386	Meleagris_gallopavo
ENSPNAG00000011708	ssb	99	53.202	ENSMICG00000033304	-	91	54.696	Microcebus_murinus
ENSPNAG00000011708	ssb	100	58.252	ENSMICG00000028252	-	98	57.143	Microcebus_murinus
ENSPNAG00000011708	ssb	90	55.208	ENSMODG00000008227	-	98	53.995	Monodelphis_domestica
ENSPNAG00000011708	ssb	92	49.474	ENSMODG00000019271	-	98	47.407	Monodelphis_domestica
ENSPNAG00000011708	ssb	100	46.098	ENSMODG00000007027	-	98	45.320	Monodelphis_domestica
ENSPNAG00000011708	ssb	80	67.683	ENSMALG00000008045	ssb	79	67.890	Monopterus_albus
ENSPNAG00000011708	ssb	100	52.459	MGP_CAROLIEiJ_G0023629	-	96	59.211	Mus_caroli
ENSPNAG00000011708	ssb	100	51.991	ENSMUSG00000068882	Ssb	96	59.211	Mus_musculus
ENSPNAG00000011708	ssb	100	52.019	MGP_PahariEiJ_G0025081	-	96	59.211	Mus_pahari
ENSPNAG00000011708	ssb	100	51.991	MGP_SPRETEiJ_G0024551	Ssb	96	59.211	Mus_spretus
ENSPNAG00000011708	ssb	100	58.738	ENSMPUG00000000785	SSB	98	58.128	Mustela_putorius_furo
ENSPNAG00000011708	ssb	100	55.189	ENSMLUG00000016316	SSB	99	53.774	Myotis_lucifugus
ENSPNAG00000011708	ssb	100	57.843	ENSNBRG00000012661	ssb	86	62.270	Neolamprologus_brichardi
ENSPNAG00000011708	ssb	100	57.317	ENSNLEG00000004958	SSB	98	57.143	Nomascus_leucogenys
ENSPNAG00000011708	ssb	83	46.647	ENSNLEG00000028754	-	76	46.769	Nomascus_leucogenys
ENSPNAG00000011708	ssb	61	61.847	ENSMEUG00000001650	-	100	61.847	Notamacropus_eugenii
ENSPNAG00000011708	ssb	52	60.897	ENSOPRG00000008475	-	54	60.897	Ochotona_princeps
ENSPNAG00000011708	ssb	94	56.021	ENSODEG00000004202	-	99	55.236	Octodon_degus
ENSPNAG00000011708	ssb	100	59.069	ENSONIG00000008776	ssb	83	65.443	Oreochromis_niloticus
ENSPNAG00000011708	ssb	99	57.606	ENSOANG00000008543	SSB	97	57.606	Ornithorhynchus_anatinus
ENSPNAG00000011708	ssb	100	56.829	ENSOCUG00000010396	SSB	98	56.158	Oryctolagus_cuniculus
ENSPNAG00000011708	ssb	100	62.439	ENSORLG00000017208	ssb	100	62.195	Oryzias_latipes
ENSPNAG00000011708	ssb	100	61.463	ENSORLG00020022574	ssb	100	62.195	Oryzias_latipes_hni
ENSPNAG00000011708	ssb	100	61.463	ENSORLG00015016592	ssb	100	62.439	Oryzias_latipes_hsok
ENSPNAG00000011708	ssb	100	62.774	ENSOMEG00000003193	ssb	100	62.500	Oryzias_melastigma
ENSPNAG00000011708	ssb	100	54.884	ENSOGAG00000029768	SSB	98	53.428	Otolemur_garnettii
ENSPNAG00000011708	ssb	100	58.010	ENSOARG00000002906	SSB	98	56.897	Ovis_aries
ENSPNAG00000011708	ssb	92	46.966	ENSPPAG00000006189	-	95	44.828	Pan_paniscus
ENSPNAG00000011708	ssb	100	57.561	ENSPPAG00000042673	SSB	98	57.389	Pan_paniscus
ENSPNAG00000011708	ssb	100	48.544	ENSPPAG00000032427	-	96	54.839	Pan_paniscus
ENSPNAG00000011708	ssb	100	58.010	ENSPPRG00000006599	SSB	98	57.389	Panthera_pardus
ENSPNAG00000011708	ssb	100	58.010	ENSPTIG00000011021	SSB	96	57.389	Panthera_tigris_altaica
ENSPNAG00000011708	ssb	100	45.874	ENSPTRG00000042880	-	99	45.012	Pan_troglodytes
ENSPNAG00000011708	ssb	100	57.561	ENSPTRG00000012620	SSB	98	57.389	Pan_troglodytes
ENSPNAG00000011708	ssb	99	41.176	ENSPANG00000031877	-	94	39.604	Papio_anubis
ENSPNAG00000011708	ssb	100	57.561	ENSPANG00000007440	SSB	98	57.389	Papio_anubis
ENSPNAG00000011708	ssb	99	43.210	ENSPANG00000034126	-	98	41.379	Papio_anubis
ENSPNAG00000011708	ssb	100	71.324	ENSPKIG00000019325	ssb	99	70.833	Paramormyrops_kingsleyae
ENSPNAG00000011708	ssb	100	59.512	ENSPSIG00000002265	SSB	92	59.360	Pelodiscus_sinensis
ENSPNAG00000011708	ssb	87	56.742	ENSPMGG00000020075	ssb	78	59.801	Periophthalmus_magnuspinnatus
ENSPNAG00000011708	ssb	78	49.688	ENSPMAG00000002982	ssb	74	49.216	Petromyzon_marinus
ENSPNAG00000011708	ssb	96	57.320	ENSPCIG00000028591	-	98	56.757	Phascolarctos_cinereus
ENSPNAG00000011708	ssb	100	60.976	ENSPFOG00000009650	ssb	100	62.439	Poecilia_formosa
ENSPNAG00000011708	ssb	100	60.976	ENSPLAG00000020498	ssb	100	62.683	Poecilia_latipinna
ENSPNAG00000011708	ssb	100	62.439	ENSPMEG00000001051	ssb	100	62.195	Poecilia_mexicana
ENSPNAG00000011708	ssb	91	63.102	ENSPREG00000003708	ssb	96	64.754	Poecilia_reticulata
ENSPNAG00000011708	ssb	100	57.317	ENSPPYG00000012919	SSB	98	57.143	Pongo_abelii
ENSPNAG00000011708	ssb	95	55.243	ENSPCAG00000010276	SSB	99	54.124	Procavia_capensis
ENSPNAG00000011708	ssb	100	51.456	ENSPCOG00000023189	-	98	50.246	Propithecus_coquereli
ENSPNAG00000011708	ssb	100	56.068	ENSPCOG00000015741	-	98	54.926	Propithecus_coquereli
ENSPNAG00000011708	ssb	86	60.286	ENSPVAG00000006615	SSB	87	62.541	Pteropus_vampyrus
ENSPNAG00000011708	ssb	100	57.843	ENSPNYG00000006444	ssb	86	61.963	Pundamilia_nyererei
ENSPNAG00000011708	ssb	99	52.195	ENSRNOG00000011606	AABR07061825.1	98	50.367	Rattus_norvegicus
ENSPNAG00000011708	ssb	100	51.756	ENSRNOG00000007998	Ssb	98	49.289	Rattus_norvegicus
ENSPNAG00000011708	ssb	95	50.388	ENSRBIG00000041232	-	98	50.260	Rhinopithecus_bieti
ENSPNAG00000011708	ssb	87	53.090	ENSRBIG00000041608	-	94	51.695	Rhinopithecus_bieti
ENSPNAG00000011708	ssb	100	48.792	ENSRBIG00000041972	SSB	98	48.537	Rhinopithecus_bieti
ENSPNAG00000011708	ssb	99	42.752	ENSRBIG00000029918	-	98	42.015	Rhinopithecus_bieti
ENSPNAG00000011708	ssb	100	57.561	ENSRROG00000040346	SSB	98	57.389	Rhinopithecus_roxellana
ENSPNAG00000011708	ssb	87	56.742	ENSRROG00000034102	-	85	56.497	Rhinopithecus_roxellana
ENSPNAG00000011708	ssb	99	48.403	ENSRROG00000007149	-	98	47.666	Rhinopithecus_roxellana
ENSPNAG00000011708	ssb	99	50.868	ENSRROG00000031684	-	99	50.623	Rhinopithecus_roxellana
ENSPNAG00000011708	ssb	100	57.317	ENSSBOG00000027204	SSB	98	57.143	Saimiri_boliviensis_boliviensis
ENSPNAG00000011708	ssb	100	56.522	ENSSHAG00000018062	SSB	98	57.002	Sarcophilus_harrisii
ENSPNAG00000011708	ssb	100	69.586	ENSSFOG00015000550	ssb	99	69.363	Scleropages_formosus
ENSPNAG00000011708	ssb	100	59.113	ENSSMAG00000013885	ssb	100	59.113	Scophthalmus_maximus
ENSPNAG00000011708	ssb	100	61.951	ENSSDUG00000020117	ssb	100	63.659	Seriola_dumerili
ENSPNAG00000011708	ssb	100	59.951	ENSSLDG00000002525	ssb	100	59.951	Seriola_lalandi_dorsalis
ENSPNAG00000011708	ssb	95	53.470	ENSSARG00000007747	SSB	99	52.320	Sorex_araneus
ENSPNAG00000011708	ssb	100	57.933	ENSSPUG00000012112	SSB	98	57.635	Sphenodon_punctatus
ENSPNAG00000011708	ssb	100	63.081	ENSSPAG00000005696	ssb	100	62.347	Stegastes_partitus
ENSPNAG00000011708	ssb	89	55.586	ENSSSCG00000015938	SSB	80	57.231	Sus_scrofa
ENSPNAG00000011708	ssb	94	57.106	ENSTGUG00000007942	SSB	99	56.724	Taeniopygia_guttata
ENSPNAG00000011708	ssb	100	60.294	ENSTRUG00000017839	ssb	100	60.784	Takifugu_rubripes
ENSPNAG00000011708	ssb	90	62.703	ENSTNIG00000000915	ssb	99	61.685	Tetraodon_nigroviridis
ENSPNAG00000011708	ssb	82	60.000	ENSTBEG00000009056	SSB	80	59.459	Tupaia_belangeri
ENSPNAG00000011708	ssb	100	57.767	ENSTTRG00000002152	SSB	98	56.897	Tursiops_truncatus
ENSPNAG00000011708	ssb	90	59.786	ENSUAMG00000027833	SSB	95	58.840	Ursus_americanus
ENSPNAG00000011708	ssb	100	57.524	ENSUMAG00000013907	SSB	98	56.897	Ursus_maritimus
ENSPNAG00000011708	ssb	100	57.767	ENSVPAG00000007183	SSB	98	56.650	Vicugna_pacos
ENSPNAG00000011708	ssb	100	58.010	ENSVVUG00000016573	SSB	76	57.143	Vulpes_vulpes
ENSPNAG00000011708	ssb	98	52.404	ENSXETG00000025402	ssb	97	52.163	Xenopus_tropicalis
ENSPNAG00000011708	ssb	91	59.838	ENSXCOG00000019109	ssb	93	67.460	Xiphophorus_couchianus
ENSPNAG00000011708	ssb	100	59.512	ENSXMAG00000004888	ssb	100	61.220	Xiphophorus_maculatus