EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000011713 (Gene tree)
Gene ID: 108431981
Gene Symbol: tnrc6b
Alias: fa01f05|fb21h03|fc23h10|hm:zeh0114|im:6968518|wu:fa01f05|wu:fb21h03|wu:fc23h10
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 19665 bases
Position: chrKV575397.1:655627-675291
Accession: 108431981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000005492	Ago_hook	PF10427.9	5.6e-10	1	1
ENSPNAP00000026409	Ago_hook	PF10427.9	5.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000005182	-	8355	XM_017705485	ENSPNAP00000026409	2048 (aa)	XP_017560974	-
ENSPNAT00000005204	-	8235	XM_017705489	ENSPNAP00000005492	2008 (aa)	XP_017560978	-

Gene Model

Click here to download ENSPNAG00000011713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000011713's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000011713	tnrc6b	72	46.531	ENSG00000100354	TNRC6B	82	60.714	Homo_sapiens
ENSPNAG00000011713	tnrc6b	90	46.075	ENSAPLG00000009347	TNRC6B	61	50.775	Anas_platyrhynchos
ENSPNAG00000011713	tnrc6b	59	56.637	ENSACAG00000007281	TNRC6B	53	59.286	Anolis_carolinensis
ENSPNAG00000011713	tnrc6b	79	42.321	ENSANAG00000035042	TNRC6B	82	60.714	Aotus_nancymaae
ENSPNAG00000011713	tnrc6b	98	80.392	ENSAMXG00000008707	tnrc6b	91	81.360	Astyanax_mexicanus
ENSPNAG00000011713	tnrc6b	64	66.795	ENSCJAG00000002732	TNRC6B	82	60.714	Callithrix_jacchus
ENSPNAG00000011713	tnrc6b	72	47.468	ENSCAFG00000001255	TNRC6B	61	52.196	Canis_familiaris
ENSPNAG00000011713	tnrc6b	79	43.884	ENSCAFG00020002189	TNRC6B	75	44.254	Canis_lupus_dingo
ENSPNAG00000011713	tnrc6b	72	46.655	ENSTSYG00000011836	TNRC6B	82	60.714	Carlito_syrichta
ENSPNAG00000011713	tnrc6b	72	46.631	ENSCPOG00000005705	TNRC6B	62	65.079	Cavia_porcellus
ENSPNAG00000011713	tnrc6b	79	41.449	ENSCCAG00000019912	TNRC6B	82	60.714	Cebus_capucinus
ENSPNAG00000011713	tnrc6b	71	47.572	ENSCATG00000029291	TNRC6B	82	60.714	Cercocebus_atys
ENSPNAG00000011713	tnrc6b	71	46.892	ENSCLAG00000016942	TNRC6B	63	50.616	Chinchilla_lanigera
ENSPNAG00000011713	tnrc6b	72	43.470	ENSCSAG00000006021	TNRC6B	64	45.940	Chlorocebus_sabaeus
ENSPNAG00000011713	tnrc6b	84	44.772	ENSCPBG00000022932	TNRC6B	78	46.228	Chrysemys_picta_bellii
ENSPNAG00000011713	tnrc6b	72	47.089	ENSCANG00000030776	TNRC6B	82	60.714	Colobus_angolensis_palliatus
ENSPNAG00000011713	tnrc6b	72	46.263	ENSCGRG00001020166	Tnrc6b	66	48.232	Cricetulus_griseus_chok1gshd
ENSPNAG00000011713	tnrc6b	79	44.306	ENSCGRG00000016696	Tnrc6b	66	48.446	Cricetulus_griseus_crigri
ENSPNAG00000011713	tnrc6b	73	47.462	ENSDNOG00000012744	TNRC6B	64	49.091	Dasypus_novemcinctus
ENSPNAG00000011713	tnrc6b	79	44.496	ENSDORG00000003386	Tnrc6b	63	48.232	Dipodomys_ordii
ENSPNAG00000011713	tnrc6b	76	40.000	ENSETEG00000006570	TNRC6B	63	66.667	Echinops_telfairi
ENSPNAG00000011713	tnrc6b	81	43.611	ENSEASG00005005306	TNRC6B	75	44.034	Equus_asinus_asinus
ENSPNAG00000011713	tnrc6b	68	79.167	ENSECAG00000009759	TNRC6B	73	79.167	Equus_caballus
ENSPNAG00000011713	tnrc6b	80	44.877	ENSFCAG00000004791	TNRC6B	74	43.798	Felis_catus
ENSPNAG00000011713	tnrc6b	81	46.318	ENSFALG00000012195	TNRC6B	74	44.242	Ficedula_albicollis
ENSPNAG00000011713	tnrc6b	95	45.625	ENSGALG00000012050	TNRC6B	74	44.771	Gallus_gallus
ENSPNAG00000011713	tnrc6b	74	46.102	ENSGAGG00000025188	TNRC6B	75	45.848	Gopherus_agassizii
ENSPNAG00000011713	tnrc6b	73	46.756	ENSGGOG00000008444	TNRC6B	82	60.714	Gorilla_gorilla
ENSPNAG00000011713	tnrc6b	98	79.694	ENSIPUG00000001515	tnrc6b	92	80.973	Ictalurus_punctatus
ENSPNAG00000011713	tnrc6b	93	43.399	ENSJJAG00000015779	Tnrc6b	74	43.530	Jaculus_jaculus
ENSPNAG00000011713	tnrc6b	76	44.196	ENSLACG00000000628	-	75	41.867	Latimeria_chalumnae
ENSPNAG00000011713	tnrc6b	54	47.241	ENSLAFG00000014473	TNRC6B	87	51.867	Loxodonta_africana
ENSPNAG00000011713	tnrc6b	71	47.572	ENSMFAG00000003862	TNRC6B	82	60.714	Macaca_fascicularis
ENSPNAG00000011713	tnrc6b	72	47.572	ENSMMUG00000021345	TNRC6B	82	60.714	Macaca_mulatta
ENSPNAG00000011713	tnrc6b	72	47.572	ENSMNEG00000042745	TNRC6B	62	66.667	Macaca_nemestrina
ENSPNAG00000011713	tnrc6b	72	47.220	ENSMLEG00000041780	TNRC6B	82	60.714	Mandrillus_leucophaeus
ENSPNAG00000011713	tnrc6b	61	44.462	ENSMAUG00000016123	Tnrc6b	65	48.553	Mesocricetus_auratus
ENSPNAG00000011713	tnrc6b	80	42.496	ENSMICG00000014056	TNRC6B	82	60.714	Microcebus_murinus
ENSPNAG00000011713	tnrc6b	76	49.213	ENSMOCG00000020334	Tnrc6b	62	80.208	Microtus_ochrogaster
ENSPNAG00000011713	tnrc6b	78	44.782	MGP_CAROLIEiJ_G0020043	Tnrc6b	63	48.553	Mus_caroli
ENSPNAG00000011713	tnrc6b	78	44.860	ENSMUSG00000047888	Tnrc6b	80	65.079	Mus_musculus
ENSPNAG00000011713	tnrc6b	78	44.938	MGP_PahariEiJ_G0020045	Tnrc6b	63	48.446	Mus_pahari
ENSPNAG00000011713	tnrc6b	78	44.938	MGP_SPRETEiJ_G0020941	Tnrc6b	63	48.767	Mus_spretus
ENSPNAG00000011713	tnrc6b	72	46.723	ENSMLUG00000008765	TNRC6B	65	50.634	Myotis_lucifugus
ENSPNAG00000011713	tnrc6b	62	51.261	ENSNLEG00000015311	TNRC6B	82	60.714	Nomascus_leucogenys
ENSPNAG00000011713	tnrc6b	62	49.017	ENSOPRG00000012054	TNRC6B	56	66.667	Ochotona_princeps
ENSPNAG00000011713	tnrc6b	72	46.942	ENSODEG00000013146	TNRC6B	63	50.783	Octodon_degus
ENSPNAG00000011713	tnrc6b	83	59.982	ENSONIG00000019679	-	98	66.667	Oreochromis_niloticus
ENSPNAG00000011713	tnrc6b	60	51.886	ENSOCUG00000016128	TNRC6B	74	43.433	Oryctolagus_cuniculus
ENSPNAG00000011713	tnrc6b	72	46.616	ENSPPAG00000028514	TNRC6B	82	60.714	Pan_paniscus
ENSPNAG00000011713	tnrc6b	80	44.903	ENSPPRG00000017741	TNRC6B	86	54.070	Panthera_pardus
ENSPNAG00000011713	tnrc6b	73	45.439	ENSPTIG00000022064	TNRC6B	83	51.163	Panthera_tigris_altaica
ENSPNAG00000011713	tnrc6b	72	46.701	ENSPTRG00000047826	TNRC6B	82	60.714	Pan_troglodytes
ENSPNAG00000011713	tnrc6b	72	42.132	ENSPANG00000009271	TNRC6B	78	56.511	Papio_anubis
ENSPNAG00000011713	tnrc6b	85	45.125	ENSPSIG00000005318	TNRC6B	75	44.214	Pelodiscus_sinensis
ENSPNAG00000011713	tnrc6b	79	44.825	ENSPEMG00000011403	Tnrc6b	63	48.663	Peromyscus_maniculatus_bairdii
ENSPNAG00000011713	tnrc6b	71	46.934	ENSPCIG00000020347	TNRC6B	66	51.055	Phascolarctos_cinereus
ENSPNAG00000011713	tnrc6b	96	52.213	ENSPLAG00000001418	-	99	51.192	Poecilia_latipinna
ENSPNAG00000011713	tnrc6b	77	70.395	ENSPMEG00000006371	-	90	70.164	Poecilia_mexicana
ENSPNAG00000011713	tnrc6b	55	52.191	ENSPPYG00000011849	TNRC6B	63	65.079	Pongo_abelii
ENSPNAG00000011713	tnrc6b	60	47.541	ENSPCAG00000008739	TNRC6B	68	44.343	Procavia_capensis
ENSPNAG00000011713	tnrc6b	80	42.300	ENSPCOG00000020790	TNRC6B	82	60.714	Propithecus_coquereli
ENSPNAG00000011713	tnrc6b	55	51.579	ENSPVAG00000004975	TNRC6B	58	52.893	Pteropus_vampyrus
ENSPNAG00000011713	tnrc6b	72	46.453	ENSRBIG00000035576	TNRC6B	84	60.714	Rhinopithecus_bieti
ENSPNAG00000011713	tnrc6b	72	46.850	ENSRROG00000031135	TNRC6B	82	60.714	Rhinopithecus_roxellana
ENSPNAG00000011713	tnrc6b	80	42.321	ENSSBOG00000029743	TNRC6B	81	58.252	Saimiri_boliviensis_boliviensis
ENSPNAG00000011713	tnrc6b	85	47.248	ENSSHAG00000009692	TNRC6B	61	56.364	Sarcophilus_harrisii
ENSPNAG00000011713	tnrc6b	77	46.514	ENSSPUG00000010801	TNRC6B	62	50.263	Sphenodon_punctatus
ENSPNAG00000011713	tnrc6b	68	54.839	ENSSSCG00000000078	TNRC6B	63	54.857	Sus_scrofa
ENSPNAG00000011713	tnrc6b	82	48.756	ENSTGUG00000010138	-	72	48.504	Taeniopygia_guttata
ENSPNAG00000011713	tnrc6b	79	46.674	ENSTTRG00000011465	TNRC6B	57	54.580	Tursiops_truncatus
ENSPNAG00000011713	tnrc6b	80	45.118	ENSUAMG00000007174	TNRC6B	74	43.310	Ursus_americanus
ENSPNAG00000011713	tnrc6b	76	45.189	ENSUMAG00000014336	TNRC6B	74	44.168	Ursus_maritimus
ENSPNAG00000011713	tnrc6b	80	45.303	ENSVVUG00000007064	TNRC6B	75	44.120	Vulpes_vulpes
ENSPNAG00000011713	tnrc6b	83	51.722	ENSXCOG00000003042	-	97	52.026	Xiphophorus_couchianus