EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000011823 (Gene tree)
Gene ID: 108411935
Gene Symbol: skiv2l
Alias: fb70b07|wu:fb70b07
Full Name: Ski2 like RNA helicase
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 52183 bases
Position: chrKV576158.1:84797-136979
Accession: 108411935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000005657	rRNA_proc-arch	PF13234.6	1.2e-27	1	1
ENSPNAP00000005657	DEAD	PF00270.29	2.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000004908	-	5965	XM_017683740	ENSPNAP00000005657	1246 (aa)	XP_017539229	UPI0008148B11

Gene Model

Click here to download ENSPNAG00000011823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000011823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000011823	skiv2l	76	36.745	ENSPNAG00000008794	mtrex	93	36.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000011823	skiv2l	99	60.884	ENSG00000204351	SKIV2L	98	60.706	Homo_sapiens
ENSPNAG00000011823	skiv2l	100	83.001	ENSAPOG00000008257	skiv2l	99	83.360	Acanthochromis_polyacanthus
ENSPNAG00000011823	skiv2l	99	60.866	ENSAMEG00000002078	SKIV2L	98	60.706	Ailuropoda_melanoleuca
ENSPNAG00000011823	skiv2l	99	81.958	ENSACIG00000016719	skiv2l	99	82.143	Amphilophus_citrinellus
ENSPNAG00000011823	skiv2l	100	83.574	ENSAOCG00000017352	skiv2l	99	83.929	Amphiprion_ocellaris
ENSPNAG00000011823	skiv2l	100	83.494	ENSAPEG00000001055	skiv2l	99	83.766	Amphiprion_percula
ENSPNAG00000011823	skiv2l	100	83.974	ENSATEG00000007601	skiv2l	99	84.334	Anabas_testudineus
ENSPNAG00000011823	skiv2l	100	62.266	ENSACAG00000011746	SKIV2L	99	62.925	Anolis_carolinensis
ENSPNAG00000011823	skiv2l	99	61.365	ENSANAG00000037992	SKIV2L	99	60.915	Aotus_nancymaae
ENSPNAG00000011823	skiv2l	100	84.029	ENSACLG00000006886	skiv2l	99	84.309	Astatotilapia_calliptera
ENSPNAG00000011823	skiv2l	100	92.160	ENSAMXG00000011517	skiv2l	99	92.464	Astyanax_mexicanus
ENSPNAG00000011823	skiv2l	99	60.385	ENSBTAG00000005587	SKIV2L	98	60.288	Bos_taurus
ENSPNAG00000011823	skiv2l	89	42.075	WBGene00008502	skih-2	93	42.371	Caenorhabditis_elegans
ENSPNAG00000011823	skiv2l	99	61.365	ENSCJAG00000002263	SKIV2L	98	61.365	Callithrix_jacchus
ENSPNAG00000011823	skiv2l	99	60.946	ENSCAFG00000000679	SKIV2L	98	60.786	Canis_familiaris
ENSPNAG00000011823	skiv2l	99	60.866	ENSCAFG00020000948	SKIV2L	98	60.706	Canis_lupus_dingo
ENSPNAG00000011823	skiv2l	99	60.866	ENSCHIG00000012897	SKIV2L	98	60.689	Capra_hircus
ENSPNAG00000011823	skiv2l	99	60.803	ENSTSYG00000012133	SKIV2L	98	60.769	Carlito_syrichta
ENSPNAG00000011823	skiv2l	99	60.887	ENSCPOG00000001307	SKIV2L	98	60.950	Cavia_porcellus
ENSPNAG00000011823	skiv2l	99	61.347	ENSCCAG00000026206	SKIV2L	99	60.594	Cebus_capucinus
ENSPNAG00000011823	skiv2l	99	60.866	ENSCATG00000036901	SKIV2L	98	60.769	Cercocebus_atys
ENSPNAG00000011823	skiv2l	99	60.866	ENSCLAG00000007678	SKIV2L	98	60.689	Chinchilla_lanigera
ENSPNAG00000011823	skiv2l	99	60.964	ENSCSAG00000008988	SKIV2L	98	60.884	Chlorocebus_sabaeus
ENSPNAG00000011823	skiv2l	87	61.494	ENSCPBG00000000343	SKIV2L	97	61.494	Chrysemys_picta_bellii
ENSPNAG00000011823	skiv2l	93	51.024	ENSCING00000005576	-	99	50.852	Ciona_intestinalis
ENSPNAG00000011823	skiv2l	99	61.124	ENSCANG00000039709	SKIV2L	99	60.497	Colobus_angolensis_palliatus
ENSPNAG00000011823	skiv2l	99	61.384	ENSCGRG00001008385	Skiv2l	98	61.205	Cricetulus_griseus_chok1gshd
ENSPNAG00000011823	skiv2l	99	82.410	ENSCSEG00000011326	skiv2l	98	82.386	Cynoglossus_semilaevis
ENSPNAG00000011823	skiv2l	100	83.654	ENSCVAG00000003072	skiv2l	99	83.929	Cyprinodon_variegatus
ENSPNAG00000011823	skiv2l	100	86.502	ENSDARG00000062206	skiv2l	99	86.618	Danio_rerio
ENSPNAG00000011823	skiv2l	92	65.888	ENSDNOG00000037590	SKIV2L	91	65.888	Dasypus_novemcinctus
ENSPNAG00000011823	skiv2l	92	46.108	FBgn0039117	tst	96	46.024	Drosophila_melanogaster
ENSPNAG00000011823	skiv2l	68	76.389	ENSETEG00000009522	SKIV2L	68	76.389	Echinops_telfairi
ENSPNAG00000011823	skiv2l	91	55.918	ENSEBUG00000013680	-	97	55.937	Eptatretus_burgeri
ENSPNAG00000011823	skiv2l	92	62.414	ENSEASG00005015534	SKIV2L	99	62.222	Equus_asinus_asinus
ENSPNAG00000011823	skiv2l	93	61.050	ENSECAG00000021823	SKIV2L	94	60.881	Equus_caballus
ENSPNAG00000011823	skiv2l	50	76.285	ENSEEUG00000005049	SKIV2L	56	76.285	Erinaceus_europaeus
ENSPNAG00000011823	skiv2l	100	83.799	ENSELUG00000000181	skiv2l	99	83.832	Esox_lucius
ENSPNAG00000011823	skiv2l	99	61.187	ENSFCAG00000004519	SKIV2L	98	61.026	Felis_catus
ENSPNAG00000011823	skiv2l	99	59.631	ENSFDAG00000009438	SKIV2L	98	59.680	Fukomys_damarensis
ENSPNAG00000011823	skiv2l	100	83.654	ENSFHEG00000008853	skiv2l	99	83.929	Fundulus_heteroclitus
ENSPNAG00000011823	skiv2l	99	79.823	ENSGMOG00000005926	skiv2l	98	79.967	Gadus_morhua
ENSPNAG00000011823	skiv2l	76	57.440	ENSGALG00000035499	SKIV2L	98	57.453	Gallus_gallus
ENSPNAG00000011823	skiv2l	100	83.814	ENSGAFG00000002382	skiv2l	99	84.253	Gambusia_affinis
ENSPNAG00000011823	skiv2l	100	82.043	ENSGACG00000002927	skiv2l	98	82.215	Gasterosteus_aculeatus
ENSPNAG00000011823	skiv2l	99	61.044	ENSGGOG00000002270	SKIV2L	98	60.866	Gorilla_gorilla
ENSPNAG00000011823	skiv2l	100	83.949	ENSHBUG00000000726	skiv2l	99	84.228	Haplochromis_burtoni
ENSPNAG00000011823	skiv2l	99	60.866	ENSHGLG00000016596	SKIV2L	98	61.026	Heterocephalus_glaber_female
ENSPNAG00000011823	skiv2l	99	59.423	ENSHGLG00100014161	SKIV2L	98	59.583	Heterocephalus_glaber_male
ENSPNAG00000011823	skiv2l	98	76.264	ENSHCOG00000007191	skiv2l	100	76.346	Hippocampus_comes
ENSPNAG00000011823	skiv2l	100	89.040	ENSIPUG00000016263	skiv2l	100	89.512	Ictalurus_punctatus
ENSPNAG00000011823	skiv2l	99	61.288	ENSSTOG00000014596	SKIV2L	98	61.107	Ictidomys_tridecemlineatus
ENSPNAG00000011823	skiv2l	56	61.905	ENSLACG00000002986	-	59	61.905	Latimeria_chalumnae
ENSPNAG00000011823	skiv2l	99	60.964	ENSLAFG00000014231	SKIV2L	98	60.606	Loxodonta_africana
ENSPNAG00000011823	skiv2l	99	61.026	ENSMFAG00000034235	SKIV2L	98	60.929	Macaca_fascicularis
ENSPNAG00000011823	skiv2l	99	61.026	ENSMMUG00000000736	SKIV2L	98	61.009	Macaca_mulatta
ENSPNAG00000011823	skiv2l	99	61.026	ENSMNEG00000044474	SKIV2L	98	60.929	Macaca_nemestrina
ENSPNAG00000011823	skiv2l	99	60.866	ENSMLEG00000030512	SKIV2L	98	60.769	Mandrillus_leucophaeus
ENSPNAG00000011823	skiv2l	100	84.118	ENSMAMG00000002927	skiv2l	100	83.974	Mastacembelus_armatus
ENSPNAG00000011823	skiv2l	100	83.949	ENSMZEG00005026415	skiv2l	99	84.228	Maylandia_zebra
ENSPNAG00000011823	skiv2l	68	50.773	ENSMGAG00000001320	SKIV2L	95	50.972	Meleagris_gallopavo
ENSPNAG00000011823	skiv2l	99	61.334	ENSMAUG00000018613	Skiv2l	98	60.995	Mesocricetus_auratus
ENSPNAG00000011823	skiv2l	99	60.964	ENSMICG00000046331	SKIV2L	98	60.706	Microcebus_murinus
ENSPNAG00000011823	skiv2l	99	59.952	ENSMOCG00000014240	Skiv2l	98	59.856	Microtus_ochrogaster
ENSPNAG00000011823	skiv2l	99	79.952	ENSMMOG00000014547	skiv2l	98	80.000	Mola_mola
ENSPNAG00000011823	skiv2l	99	61.367	ENSMODG00000015052	SKIV2L	98	61.409	Monodelphis_domestica
ENSPNAG00000011823	skiv2l	99	79.695	ENSMALG00000010535	skiv2l	98	79.660	Monopterus_albus
ENSPNAG00000011823	skiv2l	99	61.384	MGP_CAROLIEiJ_G0021477	Skiv2l	98	61.205	Mus_caroli
ENSPNAG00000011823	skiv2l	99	61.236	ENSMUSG00000040356	Skiv2l	98	60.978	Mus_musculus
ENSPNAG00000011823	skiv2l	99	61.557	MGP_PahariEiJ_G0020472	Skiv2l	98	61.298	Mus_pahari
ENSPNAG00000011823	skiv2l	99	61.075	MGP_SPRETEiJ_G0022382	Skiv2l	98	60.817	Mus_spretus
ENSPNAG00000011823	skiv2l	99	60.866	ENSMPUG00000010567	SKIV2L	98	60.964	Mustela_putorius_furo
ENSPNAG00000011823	skiv2l	99	60.706	ENSMLUG00000000628	SKIV2L	98	60.706	Myotis_lucifugus
ENSPNAG00000011823	skiv2l	99	81.416	ENSNBRG00000018650	skiv2l	98	81.463	Neolamprologus_brichardi
ENSPNAG00000011823	skiv2l	99	60.596	ENSNLEG00000006451	SKIV2L	99	60.418	Nomascus_leucogenys
ENSPNAG00000011823	skiv2l	78	61.062	ENSMEUG00000006072	SKIV2L	77	61.062	Notamacropus_eugenii
ENSPNAG00000011823	skiv2l	99	60.803	ENSOPRG00000003972	SKIV2L	98	60.671	Ochotona_princeps
ENSPNAG00000011823	skiv2l	99	60.946	ENSODEG00000017516	SKIV2L	98	60.769	Octodon_degus
ENSPNAG00000011823	skiv2l	100	84.135	ENSONIG00000013500	skiv2l	99	84.416	Oreochromis_niloticus
ENSPNAG00000011823	skiv2l	99	61.365	ENSOCUG00000007019	SKIV2L	98	61.107	Oryctolagus_cuniculus
ENSPNAG00000011823	skiv2l	100	81.862	ENSORLG00000002021	skiv2l	99	82.362	Oryzias_latipes
ENSPNAG00000011823	skiv2l	100	81.702	ENSORLG00020009462	skiv2l	99	82.201	Oryzias_latipes_hni
ENSPNAG00000011823	skiv2l	100	81.623	ENSORLG00015016750	skiv2l	99	82.320	Oryzias_latipes_hsok
ENSPNAG00000011823	skiv2l	100	82.466	ENSOMEG00000008531	skiv2l	99	82.806	Oryzias_melastigma
ENSPNAG00000011823	skiv2l	99	60.866	ENSOGAG00000009578	SKIV2L	98	60.751	Otolemur_garnettii
ENSPNAG00000011823	skiv2l	99	57.704	ENSOARG00000002411	-	98	57.547	Ovis_aries
ENSPNAG00000011823	skiv2l	99	60.304	ENSPPAG00000040211	SKIV2L	99	60.128	Pan_paniscus
ENSPNAG00000011823	skiv2l	99	61.347	ENSPPRG00000005017	SKIV2L	98	61.187	Panthera_pardus
ENSPNAG00000011823	skiv2l	99	60.946	ENSPTIG00000021656	SKIV2L	98	60.786	Panthera_tigris_altaica
ENSPNAG00000011823	skiv2l	99	60.884	ENSPTRG00000017997	SKIV2L	98	60.706	Pan_troglodytes
ENSPNAG00000011823	skiv2l	99	60.096	ENSPANG00000011501	SKIV2L	99	60.000	Papio_anubis
ENSPNAG00000011823	skiv2l	100	79.428	ENSPKIG00000011876	skiv2l	100	79.428	Paramormyrops_kingsleyae
ENSPNAG00000011823	skiv2l	99	80.772	ENSPMGG00000019707	skiv2l	98	81.072	Periophthalmus_magnuspinnatus
ENSPNAG00000011823	skiv2l	99	61.062	ENSPEMG00000019001	Skiv2l	98	60.897	Peromyscus_maniculatus_bairdii
ENSPNAG00000011823	skiv2l	99	61.221	ENSPCIG00000018792	SKIV2L	98	61.280	Phascolarctos_cinereus
ENSPNAG00000011823	skiv2l	100	83.894	ENSPFOG00000002424	skiv2l	99	84.334	Poecilia_formosa
ENSPNAG00000011823	skiv2l	100	83.894	ENSPLAG00000018304	skiv2l	99	84.172	Poecilia_latipinna
ENSPNAG00000011823	skiv2l	100	83.894	ENSPMEG00000006997	skiv2l	99	84.334	Poecilia_mexicana
ENSPNAG00000011823	skiv2l	99	78.986	ENSPREG00000002277	skiv2l	98	79.187	Poecilia_reticulata
ENSPNAG00000011823	skiv2l	99	60.643	ENSPPYG00000016472	SKIV2L	98	60.643	Pongo_abelii
ENSPNAG00000011823	skiv2l	77	61.568	ENSPCAG00000004178	SKIV2L	77	61.568	Procavia_capensis
ENSPNAG00000011823	skiv2l	99	61.205	ENSPCOG00000010308	SKIV2L	98	61.026	Propithecus_coquereli
ENSPNAG00000011823	skiv2l	99	61.026	ENSPVAG00000005136	SKIV2L	98	61.026	Pteropus_vampyrus
ENSPNAG00000011823	skiv2l	98	82.480	ENSPNYG00000017853	skiv2l	98	79.529	Pundamilia_nyererei
ENSPNAG00000011823	skiv2l	99	61.637	ENSRNOG00000000421	Skiv2l	98	61.637	Rattus_norvegicus
ENSPNAG00000011823	skiv2l	99	59.968	ENSRBIG00000035485	SKIV2L	99	59.873	Rhinopithecus_bieti
ENSPNAG00000011823	skiv2l	99	61.044	ENSRROG00000036429	SKIV2L	98	60.946	Rhinopithecus_roxellana
ENSPNAG00000011823	skiv2l	90	39.604	YLR398C	-	90	39.554	Saccharomyces_cerevisiae
ENSPNAG00000011823	skiv2l	99	61.687	ENSSBOG00000027920	SKIV2L	98	61.687	Saimiri_boliviensis_boliviensis
ENSPNAG00000011823	skiv2l	99	61.129	ENSSHAG00000008963	SKIV2L	98	60.208	Sarcophilus_harrisii
ENSPNAG00000011823	skiv2l	100	81.804	ENSSFOG00015016930	skiv2l	100	81.644	Scleropages_formosus
ENSPNAG00000011823	skiv2l	100	83.734	ENSSMAG00000020185	skiv2l	99	84.010	Scophthalmus_maximus
ENSPNAG00000011823	skiv2l	100	84.122	ENSSDUG00000019977	skiv2l	99	84.565	Seriola_dumerili
ENSPNAG00000011823	skiv2l	99	79.227	ENSSLDG00000024382	skiv2l	98	79.268	Seriola_lalandi_dorsalis
ENSPNAG00000011823	skiv2l	99	58.701	ENSSPUG00000012945	SKIV2L	99	58.521	Sphenodon_punctatus
ENSPNAG00000011823	skiv2l	95	83.164	ENSSPAG00000012904	skiv2l	98	83.619	Stegastes_partitus
ENSPNAG00000011823	skiv2l	99	60.873	ENSSSCG00000001424	SKIV2L	99	60.017	Sus_scrofa
ENSPNAG00000011823	skiv2l	73	84.492	ENSTRUG00000000966	skiv2l	100	67.724	Takifugu_rubripes
ENSPNAG00000011823	skiv2l	100	79.409	ENSTNIG00000004382	skiv2l	98	79.628	Tetraodon_nigroviridis
ENSPNAG00000011823	skiv2l	93	62.209	ENSTBEG00000003462	SKIV2L	93	62.209	Tupaia_belangeri
ENSPNAG00000011823	skiv2l	99	56.776	ENSTTRG00000005931	SKIV2L	98	56.539	Tursiops_truncatus
ENSPNAG00000011823	skiv2l	99	61.187	ENSUAMG00000024336	SKIV2L	98	61.026	Ursus_americanus
ENSPNAG00000011823	skiv2l	92	62.414	ENSUMAG00000012666	SKIV2L	99	62.222	Ursus_maritimus
ENSPNAG00000011823	skiv2l	99	60.946	ENSVVUG00000022807	SKIV2L	98	60.786	Vulpes_vulpes
ENSPNAG00000011823	skiv2l	99	58.300	ENSXETG00000010932	skiv2l	98	58.180	Xenopus_tropicalis
ENSPNAG00000011823	skiv2l	99	82.235	ENSXCOG00000019517	skiv2l	96	82.468	Xiphophorus_couchianus
ENSPNAG00000011823	skiv2l	100	82.999	ENSXMAG00000014079	skiv2l	99	83.428	Xiphophorus_maculatus