EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000011881 (Gene tree)
Gene ID: 108441436
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 23699 bases
Position: chrKV575295.1:3107730-3131428
Accession: 108441436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000026537	ResIII	PF04851.15	6.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000004863	-	3991	XM_017720966	ENSPNAP00000026537	1025 (aa)	XP_017576455	UPI000814A099

Gene Model

Click here to download ENSPNAG00000011881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000011881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000011881	chd1l	52	44.669	ENSPNAG00000027824	SMARCA5	55	44.669

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000011881	chd1l	83	65.304	ENSG00000131778	CHD1L	97	66.223	Homo_sapiens
ENSPNAG00000011881	chd1l	97	70.330	ENSAPOG00000001539	chd1l	99	73.714	Acanthochromis_polyacanthus
ENSPNAG00000011881	chd1l	85	65.172	ENSAMEG00000017063	CHD1L	97	64.598	Ailuropoda_melanoleuca
ENSPNAG00000011881	chd1l	82	73.216	ENSACIG00000001164	chd1l	99	72.178	Amphilophus_citrinellus
ENSPNAG00000011881	chd1l	100	69.022	ENSAOCG00000014510	chd1l	100	68.932	Amphiprion_ocellaris
ENSPNAG00000011881	chd1l	85	71.053	ENSAPEG00000017573	chd1l	96	70.824	Amphiprion_percula
ENSPNAG00000011881	chd1l	88	69.053	ENSAPEG00000017450	chd1l	95	71.050	Amphiprion_percula
ENSPNAG00000011881	chd1l	100	69.119	ENSATEG00000013058	chd1l	100	69.022	Anabas_testudineus
ENSPNAG00000011881	chd1l	82	65.047	ENSAPLG00000009976	CHD1L	94	64.900	Anas_platyrhynchos
ENSPNAG00000011881	chd1l	85	61.409	ENSACAG00000017686	CHD1L	99	61.000	Anolis_carolinensis
ENSPNAG00000011881	chd1l	83	65.412	ENSANAG00000024347	CHD1L	95	64.478	Aotus_nancymaae
ENSPNAG00000011881	chd1l	94	70.217	ENSACLG00000019304	chd1l	98	71.654	Astatotilapia_calliptera
ENSPNAG00000011881	chd1l	100	70.010	ENSAMXG00000012367	chd1l	100	68.641	Astyanax_mexicanus
ENSPNAG00000011881	chd1l	85	65.138	ENSBTAG00000020831	CHD1L	95	65.497	Bos_taurus
ENSPNAG00000011881	chd1l	83	65.182	ENSCJAG00000002406	CHD1L	95	64.478	Callithrix_jacchus
ENSPNAG00000011881	chd1l	86	62.245	ENSCAFG00000010944	CHD1L	97	62.184	Canis_familiaris
ENSPNAG00000011881	chd1l	86	63.780	ENSCAFG00020020121	CHD1L	97	63.740	Canis_lupus_dingo
ENSPNAG00000011881	chd1l	86	64.181	ENSCHIG00000013871	CHD1L	95	65.035	Capra_hircus
ENSPNAG00000011881	chd1l	82	65.950	ENSTSYG00000003005	CHD1L	98	65.472	Carlito_syrichta
ENSPNAG00000011881	chd1l	84	62.371	ENSCPOG00000009000	CHD1L	97	62.227	Cavia_porcellus
ENSPNAG00000011881	chd1l	84	62.284	ENSCCAG00000036079	CHD1L	96	61.592	Cebus_capucinus
ENSPNAG00000011881	chd1l	83	65.537	ENSCATG00000031044	CHD1L	95	64.802	Cercocebus_atys
ENSPNAG00000011881	chd1l	85	64.294	ENSCLAG00000000880	CHD1L	97	63.949	Chinchilla_lanigera
ENSPNAG00000011881	chd1l	83	65.533	ENSCSAG00000018386	CHD1L	95	64.795	Chlorocebus_sabaeus
ENSPNAG00000011881	chd1l	83	65.654	ENSCPBG00000002600	CHD1L	96	65.070	Chrysemys_picta_bellii
ENSPNAG00000011881	chd1l	83	64.569	ENSCANG00000020239	CHD1L	95	63.869	Colobus_angolensis_palliatus
ENSPNAG00000011881	chd1l	84	64.212	ENSCGRG00001021624	Chd1l	98	63.356	Cricetulus_griseus_chok1gshd
ENSPNAG00000011881	chd1l	81	65.463	ENSCGRG00000007554	Chd1l	99	64.558	Cricetulus_griseus_crigri
ENSPNAG00000011881	chd1l	94	68.252	ENSCVAG00000002595	chd1l	97	67.942	Cyprinodon_variegatus
ENSPNAG00000011881	chd1l	99	76.871	ENSDARG00000015471	chd1l	99	76.774	Danio_rerio
ENSPNAG00000011881	chd1l	85	65.596	ENSDNOG00000019504	CHD1L	95	65.731	Dasypus_novemcinctus
ENSPNAG00000011881	chd1l	84	62.997	ENSDORG00000013555	Chd1l	95	63.721	Dipodomys_ordii
ENSPNAG00000011881	chd1l	76	60.901	ENSETEG00000008445	CHD1L	87	60.901	Echinops_telfairi
ENSPNAG00000011881	chd1l	64	52.581	ENSEBUG00000005791	chd1l	85	52.581	Eptatretus_burgeri
ENSPNAG00000011881	chd1l	84	64.890	ENSEASG00005007364	CHD1L	99	65.185	Equus_asinus_asinus
ENSPNAG00000011881	chd1l	84	64.774	ENSECAG00000008915	CHD1L	99	65.062	Equus_caballus
ENSPNAG00000011881	chd1l	100	59.156	ENSELUG00000016844	chd1l	99	58.198	Esox_lucius
ENSPNAG00000011881	chd1l	83	65.493	ENSFCAG00000007777	CHD1L	95	65.263	Felis_catus
ENSPNAG00000011881	chd1l	87	61.761	ENSFALG00000006087	CHD1L	97	62.714	Ficedula_albicollis
ENSPNAG00000011881	chd1l	82	65.952	ENSFDAG00000012431	CHD1L	98	65.238	Fukomys_damarensis
ENSPNAG00000011881	chd1l	99	66.993	ENSFHEG00000012420	chd1l	100	67.122	Fundulus_heteroclitus
ENSPNAG00000011881	chd1l	84	63.426	ENSGALG00000015038	CHD1L	95	63.860	Gallus_gallus
ENSPNAG00000011881	chd1l	99	67.954	ENSGAFG00000018198	chd1l	99	69.213	Gambusia_affinis
ENSPNAG00000011881	chd1l	51	75.676	ENSGACG00000014042	chd1l	99	75.676	Gasterosteus_aculeatus
ENSPNAG00000011881	chd1l	84	64.557	ENSGAGG00000014432	CHD1L	99	64.327	Gopherus_agassizii
ENSPNAG00000011881	chd1l	83	65.187	ENSGGOG00000001067	CHD1L	95	64.486	Gorilla_gorilla
ENSPNAG00000011881	chd1l	94	70.321	ENSHBUG00000007464	chd1l	98	72.260	Haplochromis_burtoni
ENSPNAG00000011881	chd1l	84	64.535	ENSHGLG00000008933	CHD1L	97	63.899	Heterocephalus_glaber_female
ENSPNAG00000011881	chd1l	81	63.258	ENSHGLG00100007155	CHD1L	99	62.854	Heterocephalus_glaber_male
ENSPNAG00000011881	chd1l	84	70.196	ENSHCOG00000012787	chd1l	94	69.965	Hippocampus_comes
ENSPNAG00000011881	chd1l	100	73.833	ENSIPUG00000022617	chd1l	100	73.541	Ictalurus_punctatus
ENSPNAG00000011881	chd1l	85	59.044	ENSSTOG00000007032	CHD1L	96	59.028	Ictidomys_tridecemlineatus
ENSPNAG00000011881	chd1l	100	68.019	ENSKMAG00000014358	chd1l	100	68.019	Kryptolebias_marmoratus
ENSPNAG00000011881	chd1l	100	69.119	ENSLBEG00000023845	chd1l	100	69.119	Labrus_bergylta
ENSPNAG00000011881	chd1l	99	57.625	ENSLACG00000006262	CHD1L	99	57.596	Latimeria_chalumnae
ENSPNAG00000011881	chd1l	99	67.868	ENSLOCG00000010574	chd1l	99	67.575	Lepisosteus_oculatus
ENSPNAG00000011881	chd1l	83	63.488	ENSLAFG00000018136	CHD1L	99	63.325	Loxodonta_africana
ENSPNAG00000011881	chd1l	82	65.006	ENSMFAG00000043562	CHD1L	98	65.191	Macaca_fascicularis
ENSPNAG00000011881	chd1l	83	65.421	ENSMMUG00000009024	CHD1L	95	64.685	Macaca_mulatta
ENSPNAG00000011881	chd1l	83	65.421	ENSMNEG00000039905	CHD1L	95	64.685	Macaca_nemestrina
ENSPNAG00000011881	chd1l	83	65.421	ENSMLEG00000030900	CHD1L	95	64.685	Mandrillus_leucophaeus
ENSPNAG00000011881	chd1l	100	68.283	ENSMAMG00000012822	chd1l	100	69.825	Mastacembelus_armatus
ENSPNAG00000011881	chd1l	94	70.217	ENSMZEG00005020830	chd1l	95	69.493	Maylandia_zebra
ENSPNAG00000011881	chd1l	83	63.318	ENSMGAG00000014304	CHD1L	99	63.754	Meleagris_gallopavo
ENSPNAG00000011881	chd1l	84	65.505	ENSMICG00000002497	CHD1L	96	64.808	Microcebus_murinus
ENSPNAG00000011881	chd1l	87	63.496	ENSMOCG00000006305	Chd1l	98	63.770	Microtus_ochrogaster
ENSPNAG00000011881	chd1l	85	68.000	ENSMMOG00000005964	chd1l	92	67.886	Mola_mola
ENSPNAG00000011881	chd1l	86	64.407	ENSMODG00000018717	CHD1L	98	64.424	Monodelphis_domestica
ENSPNAG00000011881	chd1l	99	69.149	ENSMALG00000014675	chd1l	99	68.768	Monopterus_albus
ENSPNAG00000011881	chd1l	86	65.017	MGP_CAROLIEiJ_G0025401	Chd1l	98	64.619	Mus_caroli
ENSPNAG00000011881	chd1l	85	64.972	ENSMUSG00000028089	Chd1l	98	64.673	Mus_musculus
ENSPNAG00000011881	chd1l	87	64.182	MGP_PahariEiJ_G0026845	Chd1l	98	64.505	Mus_pahari
ENSPNAG00000011881	chd1l	85	65.450	MGP_SPRETEiJ_G0026347	Chd1l	98	64.806	Mus_spretus
ENSPNAG00000011881	chd1l	86	64.527	ENSMPUG00000000615	CHD1L	97	64.605	Mustela_putorius_furo
ENSPNAG00000011881	chd1l	83	64.569	ENSMLUG00000007573	CHD1L	94	63.953	Myotis_lucifugus
ENSPNAG00000011881	chd1l	84	60.252	ENSNGAG00000000908	Chd1l	97	60.070	Nannospalax_galili
ENSPNAG00000011881	chd1l	84	70.548	ENSNBRG00000006021	chd1l	95	70.205	Neolamprologus_brichardi
ENSPNAG00000011881	chd1l	83	64.795	ENSNLEG00000000179	CHD1L	95	64.211	Nomascus_leucogenys
ENSPNAG00000011881	chd1l	83	55.765	ENSOPRG00000006973	CHD1L	99	56.124	Ochotona_princeps
ENSPNAG00000011881	chd1l	85	60.339	ENSODEG00000002494	CHD1L	98	60.182	Octodon_degus
ENSPNAG00000011881	chd1l	100	69.268	ENSONIG00000003183	chd1l	100	68.786	Oreochromis_niloticus
ENSPNAG00000011881	chd1l	75	62.692	ENSOANG00000003068	CHD1L	93	62.516	Ornithorhynchus_anatinus
ENSPNAG00000011881	chd1l	83	61.982	ENSOCUG00000009336	CHD1L	94	62.009	Oryctolagus_cuniculus
ENSPNAG00000011881	chd1l	88	66.777	ENSORLG00000003673	chd1l	95	69.045	Oryzias_latipes
ENSPNAG00000011881	chd1l	94	66.873	ENSORLG00020005123	chd1l	98	70.690	Oryzias_latipes_hni
ENSPNAG00000011881	chd1l	94	66.770	ENSORLG00015001680	chd1l	98	69.540	Oryzias_latipes_hsok
ENSPNAG00000011881	chd1l	81	65.161	ENSOMEG00000006109	chd1l	96	65.161	Oryzias_melastigma
ENSPNAG00000011881	chd1l	86	64.326	ENSOGAG00000008775	CHD1L	95	65.122	Otolemur_garnettii
ENSPNAG00000011881	chd1l	84	65.353	ENSOARG00000020547	CHD1L	98	65.253	Ovis_aries
ENSPNAG00000011881	chd1l	83	65.094	ENSPPAG00000039193	CHD1L	98	66.173	Pan_paniscus
ENSPNAG00000011881	chd1l	83	66.313	ENSPPRG00000010258	CHD1L	95	66.080	Panthera_pardus
ENSPNAG00000011881	chd1l	83	65.304	ENSPTRG00000001220	CHD1L	95	65.187	Pan_troglodytes
ENSPNAG00000011881	chd1l	83	65.533	ENSPANG00000009170	CHD1L	95	64.569	Papio_anubis
ENSPNAG00000011881	chd1l	99	67.544	ENSPKIG00000022166	chd1l	97	70.312	Paramormyrops_kingsleyae
ENSPNAG00000011881	chd1l	83	65.452	ENSPSIG00000012595	CHD1L	95	65.222	Pelodiscus_sinensis
ENSPNAG00000011881	chd1l	85	63.093	ENSPEMG00000013528	Chd1l	98	62.415	Peromyscus_maniculatus_bairdii
ENSPNAG00000011881	chd1l	81	65.024	ENSPCIG00000030409	CHD1L	98	65.148	Phascolarctos_cinereus
ENSPNAG00000011881	chd1l	99	68.120	ENSPFOG00000015948	chd1l	100	68.213	Poecilia_formosa
ENSPNAG00000011881	chd1l	99	68.173	ENSPLAG00000015145	chd1l	100	68.522	Poecilia_latipinna
ENSPNAG00000011881	chd1l	94	68.551	ENSPMEG00000008720	chd1l	99	68.410	Poecilia_mexicana
ENSPNAG00000011881	chd1l	84	70.595	ENSPREG00000017885	chd1l	98	70.595	Poecilia_reticulata
ENSPNAG00000011881	chd1l	83	65.497	ENSPPYG00000000946	CHD1L	95	64.795	Pongo_abelii
ENSPNAG00000011881	chd1l	79	59.305	ENSPCAG00000005959	CHD1L	90	59.012	Procavia_capensis
ENSPNAG00000011881	chd1l	82	61.995	ENSPVAG00000006084	CHD1L	99	61.401	Pteropus_vampyrus
ENSPNAG00000011881	chd1l	84	72.831	ENSPNYG00000013001	chd1l	97	72.489	Pundamilia_nyererei
ENSPNAG00000011881	chd1l	87	63.898	ENSRNOG00000017669	Chd1l	98	64.859	Rattus_norvegicus
ENSPNAG00000011881	chd1l	83	64.452	ENSRBIG00000041272	CHD1L	95	63.753	Rhinopithecus_bieti
ENSPNAG00000011881	chd1l	83	64.630	ENSRROG00000041354	CHD1L	95	63.775	Rhinopithecus_roxellana
ENSPNAG00000011881	chd1l	86	63.360	ENSSHAG00000017395	CHD1L	98	63.128	Sarcophilus_harrisii
ENSPNAG00000011881	chd1l	95	70.010	ENSSFOG00015003649	chd1l	98	72.286	Scleropages_formosus
ENSPNAG00000011881	chd1l	100	66.794	ENSSMAG00000019377	chd1l	97	69.989	Scophthalmus_maximus
ENSPNAG00000011881	chd1l	85	71.119	ENSSDUG00000019831	chd1l	95	72.674	Seriola_dumerili
ENSPNAG00000011881	chd1l	85	70.383	ENSSLDG00000012714	chd1l	95	72.047	Seriola_lalandi_dorsalis
ENSPNAG00000011881	chd1l	85	63.086	ENSSPUG00000016865	CHD1L	96	64.052	Sphenodon_punctatus
ENSPNAG00000011881	chd1l	94	70.466	ENSSPAG00000017653	chd1l	99	70.052	Stegastes_partitus
ENSPNAG00000011881	chd1l	85	63.429	ENSSSCG00000006701	CHD1L	98	62.857	Sus_scrofa
ENSPNAG00000011881	chd1l	83	64.754	ENSTGUG00000013392	-	98	64.494	Taeniopygia_guttata
ENSPNAG00000011881	chd1l	82	63.349	ENSTNIG00000004902	chd1l	99	62.998	Tetraodon_nigroviridis
ENSPNAG00000011881	chd1l	84	62.181	ENSTTRG00000011711	CHD1L	98	62.574	Tursiops_truncatus
ENSPNAG00000011881	chd1l	85	65.057	ENSUAMG00000021991	CHD1L	97	64.598	Ursus_americanus
ENSPNAG00000011881	chd1l	85	64.834	ENSUMAG00000009733	CHD1L	96	65.348	Ursus_maritimus
ENSPNAG00000011881	chd1l	86	64.286	ENSVVUG00000007316	CHD1L	92	64.253	Vulpes_vulpes
ENSPNAG00000011881	chd1l	97	65.647	ENSXCOG00000008336	chd1l	98	64.950	Xiphophorus_couchianus
ENSPNAG00000011881	chd1l	99	68.019	ENSXMAG00000015898	chd1l	100	67.473	Xiphophorus_maculatus