EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000012111 (Gene tree)
Gene ID: 108426867
Gene Symbol: cpeb3
Alias: si:ch211-129m12.2
Full Name: cytoplasmic polyadenylation element binding protein 3
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 54897 bases
Position: chrKV575331.1:3911941-3966837
Accession: 108426867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000005970	RRM_1	PF00076.22	1.1e-10	1	1
ENSPNAP00000026727	RRM_1	PF00076.22	1.1e-10	1	1
ENSPNAP00000026748	RRM_1	PF00076.22	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000004360	-	2881	XM_017696676	ENSPNAP00000026748	691 (aa)	XP_017552165	UPI000814A551
ENSPNAT00000004375	-	2857	XM_017696677	ENSPNAP00000026727	683 (aa)	XP_017552166	-
ENSPNAT00000004395	-	2277	XM_017696681	ENSPNAP00000005970	674 (aa)	XP_017552170	UPI0008149DC0

Gene Model

Click here to download ENSPNAG00000012111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000012111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000012111	cpeb3	100	56.067	ENSPNAG00000010337	cpeb4a	76	73.770
ENSPNAG00000012111	cpeb3	95	58.030	ENSPNAG00000027950	CPEB4	77	73.412
ENSPNAG00000012111	cpeb3	65	76.364	ENSPNAG00000006826	cpeb2	53	76.498

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000012111	cpeb3	100	73.259	ENSG00000107864	CPEB3	100	74.930	Homo_sapiens
ENSPNAG00000012111	cpeb3	100	83.212	ENSAPOG00000003625	cpeb3	100	85.131	Acanthochromis_polyacanthus
ENSPNAG00000012111	cpeb3	100	74.605	ENSAMEG00000014204	CPEB3	100	75.501	Ailuropoda_melanoleuca
ENSPNAG00000012111	cpeb3	100	83.965	ENSACIG00000001933	cpeb3	100	84.985	Amphilophus_citrinellus
ENSPNAG00000012111	cpeb3	100	83.090	ENSAOCG00000015423	cpeb3	100	84.985	Amphiprion_ocellaris
ENSPNAG00000012111	cpeb3	100	81.606	ENSATEG00000010649	cpeb3	100	82.482	Anabas_testudineus
ENSPNAG00000012111	cpeb3	100	80.994	ENSACAG00000006335	CPEB3	100	80.117	Anolis_carolinensis
ENSPNAG00000012111	cpeb3	100	75.762	ENSANAG00000037406	CPEB3	100	76.593	Aotus_nancymaae
ENSPNAG00000012111	cpeb3	100	83.965	ENSACLG00000018590	cpeb3	92	83.404	Astatotilapia_calliptera
ENSPNAG00000012111	cpeb3	100	73.603	ENSBTAG00000015450	CPEB3	93	96.000	Bos_taurus
ENSPNAG00000012111	cpeb3	100	75.661	ENSCJAG00000008495	CPEB3	100	76.806	Callithrix_jacchus
ENSPNAG00000012111	cpeb3	100	72.486	ENSCAFG00000007423	CPEB3	100	74.366	Canis_familiaris
ENSPNAG00000012111	cpeb3	100	74.652	ENSCAFG00020001981	CPEB3	91	96.000	Canis_lupus_dingo
ENSPNAG00000012111	cpeb3	100	75.522	ENSCHIG00000017337	CPEB3	100	76.667	Capra_hircus
ENSPNAG00000012111	cpeb3	84	85.648	ENSTSYG00000003928	CPEB3	82	87.264	Carlito_syrichta
ENSPNAG00000012111	cpeb3	100	75.069	ENSCCAG00000033267	CPEB3	100	76.039	Cebus_capucinus
ENSPNAG00000012111	cpeb3	100	75.448	ENSCATG00000038447	CPEB3	100	75.967	Cercocebus_atys
ENSPNAG00000012111	cpeb3	70	85.744	ENSCLAG00000011817	CPEB3	98	85.744	Chinchilla_lanigera
ENSPNAG00000012111	cpeb3	100	72.538	ENSCSAG00000006579	CPEB3	100	73.913	Chlorocebus_sabaeus
ENSPNAG00000012111	cpeb3	50	83.871	ENSCHOG00000000272	-	100	78.706	Choloepus_hoffmanni
ENSPNAG00000012111	cpeb3	100	81.659	ENSCPBG00000023779	CPEB3	100	80.932	Chrysemys_picta_bellii
ENSPNAG00000012111	cpeb3	100	75.346	ENSCANG00000040306	CPEB3	100	76.177	Colobus_angolensis_palliatus
ENSPNAG00000012111	cpeb3	100	76.250	ENSCGRG00001003846	Cpeb3	100	76.667	Cricetulus_griseus_chok1gshd
ENSPNAG00000012111	cpeb3	62	87.441	ENSCGRG00000002839	Cpeb3	100	89.157	Cricetulus_griseus_crigri
ENSPNAG00000012111	cpeb3	91	76.994	ENSCSEG00000008423	cpeb3	100	76.398	Cynoglossus_semilaevis
ENSPNAG00000012111	cpeb3	100	79.001	ENSCVAG00000005998	cpeb3	100	79.649	Cyprinodon_variegatus
ENSPNAG00000012111	cpeb3	100	74.779	ENSDARG00000060103	cpeb3	100	73.451	Danio_rerio
ENSPNAG00000012111	cpeb3	100	70.195	ENSDNOG00000048639	CPEB3	100	71.871	Dasypus_novemcinctus
ENSPNAG00000012111	cpeb3	91	87.448	ENSDORG00000028940	Cpeb3	88	86.858	Dipodomys_ordii
ENSPNAG00000012111	cpeb3	100	70.308	ENSETEG00000000111	CPEB3	100	71.530	Echinops_telfairi
ENSPNAG00000012111	cpeb3	91	65.835	ENSEBUG00000010745	cpeb3	91	59.891	Eptatretus_burgeri
ENSPNAG00000012111	cpeb3	100	75.417	ENSEASG00005011095	CPEB3	100	76.422	Equus_asinus_asinus
ENSPNAG00000012111	cpeb3	100	75.661	ENSECAG00000000077	CPEB3	100	76.667	Equus_caballus
ENSPNAG00000012111	cpeb3	100	83.383	ENSELUG00000019251	cpeb3	100	84.604	Esox_lucius
ENSPNAG00000012111	cpeb3	100	75.627	ENSFCAG00000032380	CPEB3	100	76.634	Felis_catus
ENSPNAG00000012111	cpeb3	100	80.029	ENSFALG00000007952	CPEB3	87	79.215	Ficedula_albicollis
ENSPNAG00000012111	cpeb3	84	89.376	ENSFDAG00000016459	CPEB3	84	89.376	Fukomys_damarensis
ENSPNAG00000012111	cpeb3	100	78.788	ENSFHEG00000021371	cpeb3	100	78.355	Fundulus_heteroclitus
ENSPNAG00000012111	cpeb3	89	80.858	ENSGMOG00000008307	cpeb3	100	80.360	Gadus_morhua
ENSPNAG00000012111	cpeb3	100	81.713	ENSGALG00000006912	CPEB3	100	80.842	Gallus_gallus
ENSPNAG00000012111	cpeb3	99	81.277	ENSGACG00000002944	cpeb3	100	81.988	Gasterosteus_aculeatus
ENSPNAG00000012111	cpeb3	100	81.871	ENSGAGG00000008528	CPEB3	100	80.994	Gopherus_agassizii
ENSPNAG00000012111	cpeb3	100	75.417	ENSGGOG00000016441	CPEB3	100	76.111	Gorilla_gorilla
ENSPNAG00000012111	cpeb3	100	83.965	ENSHBUG00000004097	cpeb3	95	84.195	Haplochromis_burtoni
ENSPNAG00000012111	cpeb3	100	75.586	ENSHGLG00000014022	CPEB3	100	75.824	Heterocephalus_glaber_female
ENSPNAG00000012111	cpeb3	100	73.796	ENSHGLG00100005200	CPEB3	100	74.471	Heterocephalus_glaber_male
ENSPNAG00000012111	cpeb3	100	78.855	ENSHCOG00000005747	cpeb3	100	78.074	Hippocampus_comes
ENSPNAG00000012111	cpeb3	100	86.857	ENSIPUG00000018571	cpeb3	100	87.000	Ictalurus_punctatus
ENSPNAG00000012111	cpeb3	100	76.062	ENSSTOG00000028061	CPEB3	100	77.369	Ictidomys_tridecemlineatus
ENSPNAG00000012111	cpeb3	62	87.678	ENSJJAG00000009135	Cpeb3	100	89.398	Jaculus_jaculus
ENSPNAG00000012111	cpeb3	100	83.382	ENSLBEG00000025961	cpeb3	100	84.257	Labrus_bergylta
ENSPNAG00000012111	cpeb3	100	79.025	ENSLACG00000011307	CPEB3	93	77.974	Latimeria_chalumnae
ENSPNAG00000012111	cpeb3	100	83.505	ENSLOCG00000007131	cpeb3	100	82.622	Lepisosteus_oculatus
ENSPNAG00000012111	cpeb3	100	77.551	ENSLAFG00000018716	CPEB3	100	78.488	Loxodonta_africana
ENSPNAG00000012111	cpeb3	100	72.611	ENSMFAG00000025613	CPEB3	100	74.422	Macaca_fascicularis
ENSPNAG00000012111	cpeb3	100	75.795	ENSMMUG00000015050	CPEB3	100	76.316	Macaca_mulatta
ENSPNAG00000012111	cpeb3	100	75.344	ENSMNEG00000045465	CPEB3	100	75.862	Macaca_nemestrina
ENSPNAG00000012111	cpeb3	86	85.648	ENSMLEG00000031794	CPEB3	97	87.264	Mandrillus_leucophaeus
ENSPNAG00000012111	cpeb3	100	83.043	ENSMAMG00000012794	cpeb3	100	84.311	Mastacembelus_armatus
ENSPNAG00000012111	cpeb3	100	83.965	ENSMZEG00005012068	cpeb3	100	84.985	Maylandia_zebra
ENSPNAG00000012111	cpeb3	100	80.146	ENSMGAG00000009148	CPEB3	100	79.245	Meleagris_gallopavo
ENSPNAG00000012111	cpeb3	100	75.862	ENSMAUG00000002789	Cpeb3	100	76.276	Mesocricetus_auratus
ENSPNAG00000012111	cpeb3	100	75.559	ENSMICG00000026866	CPEB3	100	77.266	Microcebus_murinus
ENSPNAG00000012111	cpeb3	100	76.072	ENSMOCG00000016486	Cpeb3	100	76.487	Microtus_ochrogaster
ENSPNAG00000012111	cpeb3	97	77.946	ENSMMOG00000008209	cpeb3	88	81.069	Mola_mola
ENSPNAG00000012111	cpeb3	76	83.883	ENSMODG00000006673	CPEB3	68	83.757	Monodelphis_domestica
ENSPNAG00000012111	cpeb3	100	82.310	ENSMALG00000009305	cpeb3	89	98.997	Monopterus_albus
ENSPNAG00000012111	cpeb3	100	75.862	MGP_CAROLIEiJ_G0022910	Cpeb3	100	89.398	Mus_caroli
ENSPNAG00000012111	cpeb3	100	76.283	ENSMUSG00000039652	Cpeb3	100	89.398	Mus_musculus
ENSPNAG00000012111	cpeb3	100	75.829	MGP_PahariEiJ_G0014405	Cpeb3	100	89.398	Mus_pahari
ENSPNAG00000012111	cpeb3	100	75.967	MGP_SPRETEiJ_G0023829	Cpeb3	100	89.398	Mus_spretus
ENSPNAG00000012111	cpeb3	100	73.501	ENSMPUG00000017227	CPEB3	100	74.513	Mustela_putorius_furo
ENSPNAG00000012111	cpeb3	100	76.290	ENSNGAG00000015621	Cpeb3	100	76.569	Nannospalax_galili
ENSPNAG00000012111	cpeb3	100	79.854	ENSNBRG00000018343	cpeb3	93	80.086	Neolamprologus_brichardi
ENSPNAG00000012111	cpeb3	100	75.867	ENSNLEG00000012600	CPEB3	100	76.283	Nomascus_leucogenys
ENSPNAG00000012111	cpeb3	77	82.322	ENSMEUG00000009948	-	75	84.097	Notamacropus_eugenii
ENSPNAG00000012111	cpeb3	100	73.670	ENSODEG00000004591	CPEB3	100	74.659	Octodon_degus
ENSPNAG00000012111	cpeb3	100	76.323	ENSOCUG00000010454	CPEB3	100	76.323	Oryctolagus_cuniculus
ENSPNAG00000012111	cpeb3	100	76.065	ENSORLG00000000726	cpeb3	100	76.706	Oryzias_latipes
ENSPNAG00000012111	cpeb3	100	77.059	ENSORLG00020004475	cpeb3	100	77.500	Oryzias_latipes_hni
ENSPNAG00000012111	cpeb3	100	78.561	ENSORLG00015011683	cpeb3	100	79.822	Oryzias_latipes_hsok
ENSPNAG00000012111	cpeb3	100	76.710	ENSOMEG00000018265	cpeb3	93	76.419	Oryzias_melastigma
ENSPNAG00000012111	cpeb3	100	71.866	ENSOGAG00000002002	CPEB3	100	73.736	Otolemur_garnettii
ENSPNAG00000012111	cpeb3	100	72.587	ENSOARG00000016671	CPEB3	100	74.612	Ovis_aries
ENSPNAG00000012111	cpeb3	84	84.067	ENSPPAG00000031528	CPEB3	98	83.573	Pan_paniscus
ENSPNAG00000012111	cpeb3	100	72.587	ENSPPRG00000015654	CPEB3	100	74.471	Panthera_pardus
ENSPNAG00000012111	cpeb3	67	85.495	ENSPTIG00000012018	CPEB3	97	95.862	Panthera_tigris_altaica
ENSPNAG00000012111	cpeb3	100	75.417	ENSPTRG00000002753	CPEB3	100	76.250	Pan_troglodytes
ENSPNAG00000012111	cpeb3	100	74.022	ENSPANG00000021561	CPEB3	100	75.389	Papio_anubis
ENSPNAG00000012111	cpeb3	100	88.058	ENSPKIG00000015878	cpeb3	100	87.050	Paramormyrops_kingsleyae
ENSPNAG00000012111	cpeb3	100	72.378	ENSPMGG00000022722	cpeb3	100	72.687	Periophthalmus_magnuspinnatus
ENSPNAG00000012111	cpeb3	100	76.072	ENSPEMG00000008448	Cpeb3	100	76.487	Peromyscus_maniculatus_bairdii
ENSPNAG00000012111	cpeb3	100	75.102	ENSPCIG00000017302	CPEB3	100	75.238	Phascolarctos_cinereus
ENSPNAG00000012111	cpeb3	100	76.401	ENSPFOG00000011231	cpeb3	100	78.351	Poecilia_formosa
ENSPNAG00000012111	cpeb3	100	79.539	ENSPLAG00000002852	cpeb3	100	81.991	Poecilia_latipinna
ENSPNAG00000012111	cpeb3	100	79.395	ENSPMEG00000021572	cpeb3	100	81.698	Poecilia_mexicana
ENSPNAG00000012111	cpeb3	100	79.539	ENSPREG00000003085	cpeb3	100	81.991	Poecilia_reticulata
ENSPNAG00000012111	cpeb3	100	69.317	ENSPPYG00000002481	CPEB3	100	71.127	Pongo_abelii
ENSPNAG00000012111	cpeb3	100	68.690	ENSPCAG00000012417	CPEB3	100	71.170	Procavia_capensis
ENSPNAG00000012111	cpeb3	100	75.559	ENSPCOG00000023690	CPEB3	100	76.676	Propithecus_coquereli
ENSPNAG00000012111	cpeb3	82	85.752	ENSPVAG00000007664	CPEB3	74	87.601	Pteropus_vampyrus
ENSPNAG00000012111	cpeb3	100	83.965	ENSPNYG00000005300	cpeb3	100	84.985	Pundamilia_nyererei
ENSPNAG00000012111	cpeb3	100	72.418	ENSRNOG00000020689	Cpeb3	95	72.289	Rattus_norvegicus
ENSPNAG00000012111	cpeb3	100	75.556	ENSRBIG00000041079	CPEB3	100	76.667	Rhinopithecus_bieti
ENSPNAG00000012111	cpeb3	100	75.556	ENSRROG00000031558	CPEB3	100	76.667	Rhinopithecus_roxellana
ENSPNAG00000012111	cpeb3	67	82.637	ENSSBOG00000035843	CPEB3	100	84.152	Saimiri_boliviensis_boliviensis
ENSPNAG00000012111	cpeb3	100	80.769	ENSSFOG00015004974	cpeb3	100	80.342	Scleropages_formosus
ENSPNAG00000012111	cpeb3	64	73.349	ENSSFOG00015018275	-	99	74.533	Scleropages_formosus
ENSPNAG00000012111	cpeb3	100	80.233	ENSSMAG00000013924	cpeb3	100	83.700	Scophthalmus_maximus
ENSPNAG00000012111	cpeb3	100	79.320	ENSSDUG00000019766	cpeb3	100	81.567	Seriola_dumerili
ENSPNAG00000012111	cpeb3	100	81.935	ENSSLDG00000021438	cpeb3	100	83.926	Seriola_lalandi_dorsalis
ENSPNAG00000012111	cpeb3	56	86.280	ENSSARG00000001994	CPEB3	100	88.140	Sorex_araneus
ENSPNAG00000012111	cpeb3	100	83.333	ENSSPAG00000004725	cpeb3	100	84.339	Stegastes_partitus
ENSPNAG00000012111	cpeb3	100	74.793	ENSSSCG00000010468	CPEB3	100	75.661	Sus_scrofa
ENSPNAG00000012111	cpeb3	100	81.977	ENSTGUG00000008988	CPEB3	100	81.105	Taeniopygia_guttata
ENSPNAG00000012111	cpeb3	64	78.704	ENSTBEG00000013125	-	60	80.189	Tupaia_belangeri
ENSPNAG00000012111	cpeb3	100	70.752	ENSTTRG00000012334	CPEB3	100	72.855	Tursiops_truncatus
ENSPNAG00000012111	cpeb3	100	74.370	ENSUAMG00000010827	CPEB3	96	86.047	Ursus_americanus
ENSPNAG00000012111	cpeb3	100	73.501	ENSVVUG00000021375	CPEB3	100	74.513	Vulpes_vulpes
ENSPNAG00000012111	cpeb3	100	74.487	ENSXETG00000012190	cpeb3	99	74.561	Xenopus_tropicalis
ENSPNAG00000012111	cpeb3	100	75.216	ENSXCOG00000006122	cpeb3	100	77.599	Xiphophorus_couchianus
ENSPNAG00000012111	cpeb3	100	77.089	ENSXMAG00000007652	cpeb3	94	97.945	Xiphophorus_maculatus