EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000012483 (Gene tree)
Gene ID: 108438054
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 13433 bases
Position: chrKV575542.1:21645-35077
Accession: 108438054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000006420	ResIII	PF04851.15	3.1e-08	1	1
ENSPNAP00000006420	DEAD	PF00270.29	4.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000003604	-	2550	XM_017715576	ENSPNAP00000006420	741 (aa)	XP_017571065	UPI00081479B7

Gene Model

Click here to download ENSPNAG00000012483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000012483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000012483	rad54l	73	31.453	ENSPNAG00000006556	ercc6l	50	31.046
ENSPNAG00000012483	rad54l	86	44.140	ENSPNAG00000000295	rad54b	77	44.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000012483	rad54l	99	79.759	ENSG00000085999	RAD54L	100	86.667	Homo_sapiens
ENSPNAG00000012483	rad54l	99	83.897	ENSAPOG00000011643	rad54l	99	83.897	Acanthochromis_polyacanthus
ENSPNAG00000012483	rad54l	99	78.926	ENSAMEG00000013902	RAD54L	99	78.926	Ailuropoda_melanoleuca
ENSPNAG00000012483	rad54l	99	85.270	ENSACIG00000001939	rad54l	99	85.270	Amphilophus_citrinellus
ENSPNAG00000012483	rad54l	99	87.162	ENSAOCG00000017576	rad54l	100	87.162	Amphiprion_ocellaris
ENSPNAG00000012483	rad54l	96	88.011	ENSAPEG00000020658	rad54l	98	88.011	Amphiprion_percula
ENSPNAG00000012483	rad54l	95	87.874	ENSATEG00000006767	rad54l	99	87.874	Anabas_testudineus
ENSPNAG00000012483	rad54l	94	83.834	ENSAPLG00000006389	RAD54L	99	83.834	Anas_platyrhynchos
ENSPNAG00000012483	rad54l	99	82.638	ENSACAG00000002312	RAD54L	99	82.638	Anolis_carolinensis
ENSPNAG00000012483	rad54l	99	79.759	ENSANAG00000035439	RAD54L	99	79.759	Aotus_nancymaae
ENSPNAG00000012483	rad54l	100	83.671	ENSACLG00000018711	rad54l	100	83.671	Astatotilapia_calliptera
ENSPNAG00000012483	rad54l	100	94.879	ENSAMXG00000012777	rad54l	100	94.879	Astyanax_mexicanus
ENSPNAG00000012483	rad54l	99	80.321	ENSBTAG00000019901	RAD54L	99	80.321	Bos_taurus
ENSPNAG00000012483	rad54l	93	58.621	WBGene00004298	rad-54	84	58.621	Caenorhabditis_elegans
ENSPNAG00000012483	rad54l	99	78.075	ENSCJAG00000021080	RAD54L	95	78.075	Callithrix_jacchus
ENSPNAG00000012483	rad54l	99	79.357	ENSCAFG00000004272	RAD54L	99	79.357	Canis_familiaris
ENSPNAG00000012483	rad54l	99	79.329	ENSCAFG00020015066	RAD54L	99	79.329	Canis_lupus_dingo
ENSPNAG00000012483	rad54l	99	80.295	ENSCHIG00000020118	RAD54L	99	80.295	Capra_hircus
ENSPNAG00000012483	rad54l	99	78.715	ENSTSYG00000002032	RAD54L	99	78.715	Carlito_syrichta
ENSPNAG00000012483	rad54l	99	80.429	ENSCPOG00000006768	RAD54L	99	80.429	Cavia_porcellus
ENSPNAG00000012483	rad54l	99	80.027	ENSCCAG00000025783	RAD54L	99	80.027	Cebus_capucinus
ENSPNAG00000012483	rad54l	99	80.027	ENSCATG00000030589	RAD54L	99	80.027	Cercocebus_atys
ENSPNAG00000012483	rad54l	99	80.027	ENSCLAG00000004645	RAD54L	99	80.027	Chinchilla_lanigera
ENSPNAG00000012483	rad54l	99	79.893	ENSCSAG00000001229	RAD54L	99	79.893	Chlorocebus_sabaeus
ENSPNAG00000012483	rad54l	99	82.638	ENSCPBG00000005675	RAD54L	99	82.638	Chrysemys_picta_bellii
ENSPNAG00000012483	rad54l	100	63.519	ENSCING00000024456	-	100	63.389	Ciona_intestinalis
ENSPNAG00000012483	rad54l	100	63.268	ENSCSAVG00000010859	-	100	63.399	Ciona_savignyi
ENSPNAG00000012483	rad54l	99	79.893	ENSCANG00000034891	RAD54L	99	79.893	Colobus_angolensis_palliatus
ENSPNAG00000012483	rad54l	99	79.677	ENSCGRG00001014807	Rad54l	99	79.677	Cricetulus_griseus_chok1gshd
ENSPNAG00000012483	rad54l	99	79.677	ENSCGRG00000016038	Rad54l	99	79.677	Cricetulus_griseus_crigri
ENSPNAG00000012483	rad54l	99	84.303	ENSCSEG00000001983	rad54l	99	84.303	Cynoglossus_semilaevis
ENSPNAG00000012483	rad54l	77	85.484	ENSCVAG00000019561	rad54l	100	85.484	Cyprinodon_variegatus
ENSPNAG00000012483	rad54l	100	89.474	ENSDARG00000018623	rad54l	100	89.474	Danio_rerio
ENSPNAG00000012483	rad54l	99	79.491	ENSDNOG00000003395	RAD54L	99	79.491	Dasypus_novemcinctus
ENSPNAG00000012483	rad54l	99	72.318	ENSDORG00000002632	Rad54l	99	72.450	Dipodomys_ordii
ENSPNAG00000012483	rad54l	99	55.186	FBgn0002989	okr	95	55.186	Drosophila_melanogaster
ENSPNAG00000012483	rad54l	78	79.258	ENSETEG00000000550	RAD54L	78	79.258	Echinops_telfairi
ENSPNAG00000012483	rad54l	99	79.195	ENSEASG00005004511	RAD54L	99	79.195	Equus_asinus_asinus
ENSPNAG00000012483	rad54l	99	79.625	ENSECAG00000008760	RAD54L	99	79.625	Equus_caballus
ENSPNAG00000012483	rad54l	99	77.346	ENSEEUG00000008113	RAD54L	99	77.346	Erinaceus_europaeus
ENSPNAG00000012483	rad54l	100	88.889	ENSELUG00000002295	rad54l	100	88.889	Esox_lucius
ENSPNAG00000012483	rad54l	99	78.686	ENSFCAG00000003444	RAD54L	99	78.686	Felis_catus
ENSPNAG00000012483	rad54l	99	82.369	ENSFALG00000009480	RAD54L	99	82.369	Ficedula_albicollis
ENSPNAG00000012483	rad54l	99	80.161	ENSFDAG00000007806	RAD54L	99	80.161	Fukomys_damarensis
ENSPNAG00000012483	rad54l	61	83.700	ENSFHEG00000009824	rad54l	78	83.700	Fundulus_heteroclitus
ENSPNAG00000012483	rad54l	99	85.946	ENSGMOG00000014568	rad54l	100	85.946	Gadus_morhua
ENSPNAG00000012483	rad54l	99	82.075	ENSGALG00000010356	RAD54L	92	82.075	Gallus_gallus
ENSPNAG00000012483	rad54l	91	83.704	ENSGAFG00000011110	rad54l	100	83.704	Gambusia_affinis
ENSPNAG00000012483	rad54l	100	85.984	ENSGACG00000003111	rad54l	98	85.984	Gasterosteus_aculeatus
ENSPNAG00000012483	rad54l	99	82.210	ENSGAGG00000014089	RAD54L	96	82.210	Gopherus_agassizii
ENSPNAG00000012483	rad54l	99	79.491	ENSGGOG00000010602	RAD54L	99	79.491	Gorilla_gorilla
ENSPNAG00000012483	rad54l	100	83.941	ENSHBUG00000007793	rad54l	100	83.941	Haplochromis_burtoni
ENSPNAG00000012483	rad54l	99	80.027	ENSHGLG00000000753	RAD54L	99	80.027	Heterocephalus_glaber_female
ENSPNAG00000012483	rad54l	99	80.027	ENSHGLG00100016987	RAD54L	99	80.027	Heterocephalus_glaber_male
ENSPNAG00000012483	rad54l	100	90.617	ENSIPUG00000015999	rad54l	100	92.539	Ictalurus_punctatus
ENSPNAG00000012483	rad54l	99	79.223	ENSSTOG00000029125	RAD54L	99	79.223	Ictidomys_tridecemlineatus
ENSPNAG00000012483	rad54l	99	66.488	ENSJJAG00000000235	-	99	66.354	Jaculus_jaculus
ENSPNAG00000012483	rad54l	100	85.020	ENSKMAG00000009944	rad54l	100	85.020	Kryptolebias_marmoratus
ENSPNAG00000012483	rad54l	99	86.856	ENSLBEG00000014617	rad54l	97	89.286	Labrus_bergylta
ENSPNAG00000012483	rad54l	100	87.214	ENSLOCG00000004144	rad54l	100	88.262	Lepisosteus_oculatus
ENSPNAG00000012483	rad54l	99	79.195	ENSLAFG00000007583	RAD54L	99	79.597	Loxodonta_africana
ENSPNAG00000012483	rad54l	99	80.027	ENSMFAG00000031241	RAD54L	99	80.027	Macaca_fascicularis
ENSPNAG00000012483	rad54l	99	80.027	ENSMMUG00000011568	RAD54L	99	80.027	Macaca_mulatta
ENSPNAG00000012483	rad54l	99	79.893	ENSMNEG00000038562	RAD54L	99	79.893	Macaca_nemestrina
ENSPNAG00000012483	rad54l	99	80.027	ENSMLEG00000038145	RAD54L	99	80.027	Mandrillus_leucophaeus
ENSPNAG00000012483	rad54l	99	84.553	ENSMAMG00000022180	rad54l	99	87.445	Mastacembelus_armatus
ENSPNAG00000012483	rad54l	100	83.536	ENSMZEG00005018081	rad54l	100	83.536	Maylandia_zebra
ENSPNAG00000012483	rad54l	99	82.051	ENSMGAG00000010634	RAD54L	99	82.051	Meleagris_gallopavo
ENSPNAG00000012483	rad54l	99	80.081	ENSMAUG00000020076	Rad54l	99	80.081	Mesocricetus_auratus
ENSPNAG00000012483	rad54l	99	80.295	ENSMICG00000003266	RAD54L	99	80.295	Microcebus_murinus
ENSPNAG00000012483	rad54l	99	79.946	ENSMOCG00000001778	Rad54l	99	79.946	Microtus_ochrogaster
ENSPNAG00000012483	rad54l	99	83.558	ENSMALG00000021148	rad54l	99	83.558	Monopterus_albus
ENSPNAG00000012483	rad54l	99	75.228	MGP_CAROLIEiJ_G0026325	Rad54l	99	75.228	Mus_caroli
ENSPNAG00000012483	rad54l	99	79.088	ENSMUSG00000028702	Rad54l	99	79.088	Mus_musculus
ENSPNAG00000012483	rad54l	99	79.329	MGP_PahariEiJ_G0028657	Rad54l	99	79.329	Mus_pahari
ENSPNAG00000012483	rad54l	99	79.223	MGP_SPRETEiJ_G0027297	Rad54l	99	79.223	Mus_spretus
ENSPNAG00000012483	rad54l	99	79.223	ENSMPUG00000012883	RAD54L	99	79.223	Mustela_putorius_furo
ENSPNAG00000012483	rad54l	99	79.597	ENSMLUG00000003763	RAD54L	99	79.597	Myotis_lucifugus
ENSPNAG00000012483	rad54l	99	79.088	ENSNGAG00000024213	Rad54l	99	79.088	Nannospalax_galili
ENSPNAG00000012483	rad54l	99	79.357	ENSNLEG00000016548	RAD54L	99	79.357	Nomascus_leucogenys
ENSPNAG00000012483	rad54l	91	79.377	ENSMEUG00000006793	RAD54L	100	79.377	Notamacropus_eugenii
ENSPNAG00000012483	rad54l	90	81.882	ENSOPRG00000016016	RAD54L	90	81.882	Ochotona_princeps
ENSPNAG00000012483	rad54l	99	80.161	ENSODEG00000008519	RAD54L	99	80.563	Octodon_degus
ENSPNAG00000012483	rad54l	100	83.941	ENSONIG00000007659	rad54l	100	83.941	Oreochromis_niloticus
ENSPNAG00000012483	rad54l	99	79.625	ENSOCUG00000005229	RAD54L	99	79.625	Oryctolagus_cuniculus
ENSPNAG00000012483	rad54l	100	83.671	ENSORLG00000002958	rad54l	100	83.671	Oryzias_latipes
ENSPNAG00000012483	rad54l	99	83.919	ENSORLG00020006554	rad54l	99	86.637	Oryzias_latipes_hni
ENSPNAG00000012483	rad54l	100	83.806	ENSORLG00015002907	rad54l	100	83.806	Oryzias_latipes_hsok
ENSPNAG00000012483	rad54l	99	84.595	ENSOMEG00000007770	rad54l	99	84.595	Oryzias_melastigma
ENSPNAG00000012483	rad54l	99	80.348	ENSOARG00000002264	RAD54L	99	80.348	Ovis_aries
ENSPNAG00000012483	rad54l	99	79.491	ENSPPAG00000031222	RAD54L	99	79.491	Pan_paniscus
ENSPNAG00000012483	rad54l	99	78.686	ENSPPRG00000010317	RAD54L	99	78.686	Panthera_pardus
ENSPNAG00000012483	rad54l	99	78.686	ENSPTIG00000012200	RAD54L	99	78.686	Panthera_tigris_altaica
ENSPNAG00000012483	rad54l	99	79.491	ENSPTRG00000000689	RAD54L	99	79.491	Pan_troglodytes
ENSPNAG00000012483	rad54l	99	80.027	ENSPANG00000016295	RAD54L	99	80.027	Papio_anubis
ENSPNAG00000012483	rad54l	99	79.268	ENSPKIG00000016172	rad54l	99	79.268	Paramormyrops_kingsleyae
ENSPNAG00000012483	rad54l	99	82.970	ENSPSIG00000003258	RAD54L	99	82.970	Pelodiscus_sinensis
ENSPNAG00000012483	rad54l	99	79.595	ENSPMGG00000016335	rad54l	99	79.595	Periophthalmus_magnuspinnatus
ENSPNAG00000012483	rad54l	99	79.677	ENSPEMG00000011422	Rad54l	99	79.677	Peromyscus_maniculatus_bairdii
ENSPNAG00000012483	rad54l	99	72.118	ENSPMAG00000007719	rad54l	99	72.118	Petromyzon_marinus
ENSPNAG00000012483	rad54l	100	80.780	ENSPCIG00000029032	RAD54L	100	80.780	Phascolarctos_cinereus
ENSPNAG00000012483	rad54l	86	86.614	ENSPFOG00000013732	rad54l	99	86.614	Poecilia_formosa
ENSPNAG00000012483	rad54l	82	84.903	ENSPLAG00000023416	rad54l	99	84.903	Poecilia_latipinna
ENSPNAG00000012483	rad54l	91	84.593	ENSPMEG00000008299	rad54l	100	84.593	Poecilia_mexicana
ENSPNAG00000012483	rad54l	100	82.996	ENSPREG00000019955	rad54l	100	82.996	Poecilia_reticulata
ENSPNAG00000012483	rad54l	99	68.273	ENSPPYG00000001398	RAD54L	99	68.273	Pongo_abelii
ENSPNAG00000012483	rad54l	79	81.553	ENSPCAG00000005323	RAD54L	80	81.553	Procavia_capensis
ENSPNAG00000012483	rad54l	99	79.759	ENSPCOG00000015423	RAD54L	99	79.759	Propithecus_coquereli
ENSPNAG00000012483	rad54l	99	79.706	ENSPNYG00000002942	rad54l	99	79.706	Pundamilia_nyererei
ENSPNAG00000012483	rad54l	99	79.357	ENSRNOG00000013148	Rad54l	99	79.357	Rattus_norvegicus
ENSPNAG00000012483	rad54l	99	79.893	ENSRBIG00000043495	RAD54L	99	79.893	Rhinopithecus_bieti
ENSPNAG00000012483	rad54l	99	80.027	ENSRROG00000020844	RAD54L	99	80.027	Rhinopithecus_roxellana
ENSPNAG00000012483	rad54l	81	48.536	YGL163C	RAD54	71	48.844	Saccharomyces_cerevisiae
ENSPNAG00000012483	rad54l	99	80.027	ENSSBOG00000024672	RAD54L	99	80.027	Saimiri_boliviensis_boliviensis
ENSPNAG00000012483	rad54l	100	80.563	ENSSHAG00000000110	RAD54L	100	80.563	Sarcophilus_harrisii
ENSPNAG00000012483	rad54l	100	86.775	ENSSDUG00000019147	rad54l	100	86.775	Seriola_dumerili
ENSPNAG00000012483	rad54l	100	86.910	ENSSLDG00000012330	rad54l	100	86.910	Seriola_lalandi_dorsalis
ENSPNAG00000012483	rad54l	84	78.170	ENSSARG00000006689	RAD54L	100	78.170	Sorex_araneus
ENSPNAG00000012483	rad54l	99	86.081	ENSSPAG00000011016	rad54l	100	86.081	Stegastes_partitus
ENSPNAG00000012483	rad54l	99	80.027	ENSSSCG00000003905	RAD54L	99	80.027	Sus_scrofa
ENSPNAG00000012483	rad54l	99	81.561	ENSTGUG00000008233	RAD54L	99	81.561	Taeniopygia_guttata
ENSPNAG00000012483	rad54l	99	81.377	ENSTRUG00000008410	rad54l	99	81.377	Takifugu_rubripes
ENSPNAG00000012483	rad54l	99	79.054	ENSTNIG00000004716	rad54l	99	79.459	Tetraodon_nigroviridis
ENSPNAG00000012483	rad54l	99	73.592	ENSTTRG00000006315	RAD54L	99	73.592	Tursiops_truncatus
ENSPNAG00000012483	rad54l	99	78.812	ENSUAMG00000011824	RAD54L	99	78.812	Ursus_americanus
ENSPNAG00000012483	rad54l	99	77.733	ENSUMAG00000023603	RAD54L	99	77.733	Ursus_maritimus
ENSPNAG00000012483	rad54l	99	79.223	ENSVVUG00000007201	RAD54L	99	79.223	Vulpes_vulpes
ENSPNAG00000012483	rad54l	96	77.700	ENSXETG00000004369	rad54l	99	77.700	Xenopus_tropicalis
ENSPNAG00000012483	rad54l	55	82.152	ENSXCOG00000016028	rad54l	82	85.146	Xiphophorus_couchianus