EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000013057 (Gene tree)
Gene ID: 108434862
Gene Symbol: rbm4.2
Alias: rbm4l|wu:fc25a01
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 4711 bases
Position: chrKV575452.1:905229-909939
Accession: 108434862
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000027588	zf-CCHC	PF00098.23	9.7e-07	1	1
ENSPNAP00000027588	RRM_5	PF13893.6	9.2e-08	1	1
ENSPNAP00000027588	RRM_1	PF00076.22	1.3e-33	1	2
ENSPNAP00000027588	RRM_1	PF00076.22	1.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000002250	-	4161	XM_017710285	ENSPNAP00000027588	382 (aa)	XP_017565774	UPI0008146225

Gene Model

Click here to download ENSPNAG00000013057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000013057's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000013057	rbm4.2	100	55.213	ENSPNAG00000002539	rbm4.1	100	56.325
ENSPNAG00000013057	rbm4.2	56	37.037	ENSPNAG00000019337	msi1	68	37.037
ENSPNAG00000013057	rbm4.2	56	35.802	ENSPNAG00000014957	msi2a	74	35.802
ENSPNAG00000013057	rbm4.2	56	35.802	ENSPNAG00000000844	msi2b	74	35.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000013057	rbm4.2	100	51.508	ENSAPOG00000012353	rbm4.1	100	51.508	Acanthochromis_polyacanthus
ENSPNAG00000013057	rbm4.2	100	51.408	ENSACIG00000016482	rbm4.1	100	51.395	Amphilophus_citrinellus
ENSPNAG00000013057	rbm4.2	100	51.740	ENSAOCG00000010915	rbm4.1	100	51.740	Amphiprion_ocellaris
ENSPNAG00000013057	rbm4.2	100	51.740	ENSAPEG00000009494	rbm4.1	100	51.740	Amphiprion_percula
ENSPNAG00000013057	rbm4.2	100	51.508	ENSATEG00000001904	rbm4.1	100	52.436	Anabas_testudineus
ENSPNAG00000013057	rbm4.2	97	49.347	ENSACLG00000007740	-	97	50.521	Astatotilapia_calliptera
ENSPNAG00000013057	rbm4.2	100	51.163	ENSACLG00000007722	rbm4.1	100	51.163	Astatotilapia_calliptera
ENSPNAG00000013057	rbm4.2	100	57.216	ENSAMXG00000036611	rbm4.1	100	57.772	Astyanax_mexicanus
ENSPNAG00000013057	rbm4.2	100	47.877	ENSCSEG00000014365	rbm4.1	100	48.235	Cynoglossus_semilaevis
ENSPNAG00000013057	rbm4.2	99	51.899	ENSCSEG00000014359	-	99	51.139	Cynoglossus_semilaevis
ENSPNAG00000013057	rbm4.2	100	50.118	ENSCVAG00000019349	rbm4.1	100	51.422	Cyprinodon_variegatus
ENSPNAG00000013057	rbm4.2	100	64.341	ENSDARG00000055080	rbm4.2	100	64.599	Danio_rerio
ENSPNAG00000013057	rbm4.2	100	53.991	ENSDARG00000036386	rbm4.1	100	54.717	Danio_rerio
ENSPNAG00000013057	rbm4.2	100	49.420	ENSELUG00000013205	rbm4.1	100	49.188	Esox_lucius
ENSPNAG00000013057	rbm4.2	100	51.174	ENSFHEG00000022926	rbm4.1	100	51.408	Fundulus_heteroclitus
ENSPNAG00000013057	rbm4.2	92	54.447	ENSGMOG00000007455	-	99	56.359	Gadus_morhua
ENSPNAG00000013057	rbm4.2	100	47.059	ENSGMOG00000007464	rbm4.1	100	48.235	Gadus_morhua
ENSPNAG00000013057	rbm4.2	100	50.236	ENSGAFG00000019302	rbm4.1	100	50.000	Gambusia_affinis
ENSPNAG00000013057	rbm4.2	97	49.608	ENSGACG00000000822	rbm4.1	99	49.870	Gasterosteus_aculeatus
ENSPNAG00000013057	rbm4.2	99	50.633	ENSGACG00000000821	-	99	52.284	Gasterosteus_aculeatus
ENSPNAG00000013057	rbm4.2	100	51.163	ENSHBUG00000011610	rbm4.1	100	51.163	Haplochromis_burtoni
ENSPNAG00000013057	rbm4.2	92	50.000	ENSHCOG00000011403	rbm4.1	99	49.114	Hippocampus_comes
ENSPNAG00000013057	rbm4.2	100	51.157	ENSIPUG00000022931	rbm4.1	100	50.580	Ictalurus_punctatus
ENSPNAG00000013057	rbm4.2	100	74.026	ENSIPUG00000022937	rbm4.2	100	74.805	Ictalurus_punctatus
ENSPNAG00000013057	rbm4.2	100	49.043	ENSKMAG00000006556	rbm4.1	100	48.565	Kryptolebias_marmoratus
ENSPNAG00000013057	rbm4.2	99	44.612	ENSKMAG00000006528	-	99	45.366	Kryptolebias_marmoratus
ENSPNAG00000013057	rbm4.2	100	50.812	ENSLBEG00000019782	rbm4.1	100	51.515	Labrus_bergylta
ENSPNAG00000013057	rbm4.2	99	53.316	ENSLBEG00000019756	-	99	55.051	Labrus_bergylta
ENSPNAG00000013057	rbm4.2	99	52.985	ENSMAMG00000001760	-	99	52.488	Mastacembelus_armatus
ENSPNAG00000013057	rbm4.2	100	51.972	ENSMAMG00000001765	rbm4.1	100	52.656	Mastacembelus_armatus
ENSPNAG00000013057	rbm4.2	100	51.163	ENSMZEG00005009205	rbm4.1	100	51.163	Maylandia_zebra
ENSPNAG00000013057	rbm4.2	100	50.935	ENSMMOG00000020479	rbm4.1	100	51.402	Mola_mola
ENSPNAG00000013057	rbm4.2	100	51.529	ENSMALG00000020544	rbm4.1	100	51.529	Monopterus_albus
ENSPNAG00000013057	rbm4.2	99	52.750	ENSMALG00000020557	-	99	53.418	Monopterus_albus
ENSPNAG00000013057	rbm4.2	100	51.163	ENSNBRG00000017755	rbm4.1	100	51.163	Neolamprologus_brichardi
ENSPNAG00000013057	rbm4.2	100	51.163	ENSONIG00000015730	rbm4.1	100	51.163	Oreochromis_niloticus
ENSPNAG00000013057	rbm4.2	100	50.351	ENSORLG00000012496	rbm4.1	100	50.351	Oryzias_latipes
ENSPNAG00000013057	rbm4.2	100	50.351	ENSORLG00020012454	rbm4.1	100	50.351	Oryzias_latipes_hni
ENSPNAG00000013057	rbm4.2	100	50.351	ENSORLG00015013678	rbm4.1	100	50.351	Oryzias_latipes_hsok
ENSPNAG00000013057	rbm4.2	100	50.820	ENSOMEG00000001001	rbm4.1	100	50.935	Oryzias_melastigma
ENSPNAG00000013057	rbm4.2	100	51.732	ENSPKIG00000020805	rbm4.1	87	71.739	Paramormyrops_kingsleyae
ENSPNAG00000013057	rbm4.2	100	49.645	ENSPFOG00000012675	rbm4.1	100	50.236	Poecilia_formosa
ENSPNAG00000013057	rbm4.2	95	53.243	ENSPFOG00000012685	-	95	53.784	Poecilia_formosa
ENSPNAG00000013057	rbm4.2	100	49.645	ENSPLAG00000018572	rbm4.1	100	50.236	Poecilia_latipinna
ENSPNAG00000013057	rbm4.2	100	49.645	ENSPMEG00000006290	rbm4.1	100	50.236	Poecilia_mexicana
ENSPNAG00000013057	rbm4.2	100	49.645	ENSPREG00000003724	rbm4.1	100	50.236	Poecilia_reticulata
ENSPNAG00000013057	rbm4.2	95	50.000	ENSPREG00000003764	-	95	48.919	Poecilia_reticulata
ENSPNAG00000013057	rbm4.2	100	51.163	ENSPNYG00000004662	rbm4.1	100	51.163	Pundamilia_nyererei
ENSPNAG00000013057	rbm4.2	100	52.225	ENSSFOG00015021996	sf1	100	51.756	Scleropages_formosus
ENSPNAG00000013057	rbm4.2	100	50.000	ENSSMAG00000007571	rbm4.1	100	50.467	Scophthalmus_maximus
ENSPNAG00000013057	rbm4.2	99	55.754	ENSSDUG00000003936	-	99	56.061	Seriola_dumerili
ENSPNAG00000013057	rbm4.2	100	51.157	ENSSDUG00000003925	rbm4.1	100	51.620	Seriola_dumerili
ENSPNAG00000013057	rbm4.2	100	51.157	ENSSLDG00000013147	rbm4.1	100	51.620	Seriola_lalandi_dorsalis
ENSPNAG00000013057	rbm4.2	99	54.359	ENSSLDG00000013157	-	99	56.234	Seriola_lalandi_dorsalis
ENSPNAG00000013057	rbm4.2	100	50.812	ENSSPAG00000019053	rbm4.1	100	52.927	Stegastes_partitus
ENSPNAG00000013057	rbm4.2	99	54.198	ENSSPAG00000019046	-	99	53.181	Stegastes_partitus
ENSPNAG00000013057	rbm4.2	100	50.118	ENSTRUG00000013334	rbm4.1	100	50.118	Takifugu_rubripes
ENSPNAG00000013057	rbm4.2	97	49.608	ENSTRUG00000013328	-	98	48.825	Takifugu_rubripes
ENSPNAG00000013057	rbm4.2	100	48.320	ENSTNIG00000004821	rbm4.1	100	48.187	Tetraodon_nigroviridis
ENSPNAG00000013057	rbm4.2	99	49.616	ENSTNIG00000000316	-	98	49.869	Tetraodon_nigroviridis
ENSPNAG00000013057	rbm4.2	80	45.902	ENSXETG00000026649	rbm4b	96	44.624	Xenopus_tropicalis
ENSPNAG00000013057	rbm4.2	100	49.645	ENSXCOG00000003731	rbm4.1	100	50.236	Xiphophorus_couchianus
ENSPNAG00000013057	rbm4.2	100	49.645	ENSXMAG00000008069	rbm4.1	100	50.236	Xiphophorus_maculatus
ENSPNAG00000013057	rbm4.2	95	53.243	ENSXMAG00000008059	-	95	52.973	Xiphophorus_maculatus