EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000013147 (Gene tree)
Gene ID: 108440851
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: zinc finger protein 36%2C C3H1 type-like 2
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 2184 bases
Position: chrKV575660.1:194633-196816
Accession: 108440851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000007306	zf-CCCH	PF00642.24	1.6e-32	1	4
ENSPNAP00000007306	zf-CCCH	PF00642.24	1.6e-32	2	4
ENSPNAP00000007306	zf-CCCH	PF00642.24	1.6e-32	3	4
ENSPNAP00000007306	zf-CCCH	PF00642.24	1.6e-32	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000002063	-	1552	XM_017719997	ENSPNAP00000007306	320 (aa)	XP_017575486	UPI0008147F32

Gene Model

Click here to download ENSPNAG00000013147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000013147's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000013147	cth1	80	58.077	ENSAPOG00000012552	cth1	88	60.219	Acanthochromis_polyacanthus
ENSPNAG00000013147	cth1	85	57.746	ENSACIG00000016026	cth1	96	55.215	Amphilophus_citrinellus
ENSPNAG00000013147	cth1	90	55.116	ENSAOCG00000001644	cth1	96	56.522	Amphiprion_ocellaris
ENSPNAG00000013147	cth1	90	55.116	ENSAPEG00000008930	cth1	96	56.522	Amphiprion_percula
ENSPNAG00000013147	cth1	90	57.426	ENSATEG00000002281	cth1	94	60.062	Anabas_testudineus
ENSPNAG00000013147	cth1	80	57.854	ENSACLG00000015353	cth1	88	59.567	Astatotilapia_calliptera
ENSPNAG00000013147	cth1	96	87.987	ENSAMXG00000025717	cth1	98	87.987	Astyanax_mexicanus
ENSPNAG00000013147	cth1	90	53.268	ENSCSEG00000014617	cth1	97	55.864	Cynoglossus_semilaevis
ENSPNAG00000013147	cth1	80	55.426	ENSCVAG00000001680	cth1	63	52.866	Cyprinodon_variegatus
ENSPNAG00000013147	cth1	99	76.087	ENSDARG00000057328	cth1	100	75.776	Danio_rerio
ENSPNAG00000013147	cth1	99	62.985	ENSELUG00000012738	cth1	99	64.286	Esox_lucius
ENSPNAG00000013147	cth1	90	51.815	ENSFHEG00000022665	cth1	99	50.915	Fundulus_heteroclitus
ENSPNAG00000013147	cth1	89	54.576	ENSGMOG00000007360	cth1	96	54.747	Gadus_morhua
ENSPNAG00000013147	cth1	95	51.402	ENSGAFG00000019288	cth1	96	52.812	Gambusia_affinis
ENSPNAG00000013147	cth1	97	55.963	ENSGACG00000000802	cth1	98	55.963	Gasterosteus_aculeatus
ENSPNAG00000013147	cth1	99	54.407	ENSHBUG00000014400	cth1	100	54.985	Haplochromis_burtoni
ENSPNAG00000013147	cth1	99	48.750	ENSHCOG00000010276	cth1	99	49.062	Hippocampus_comes
ENSPNAG00000013147	cth1	99	83.386	ENSIPUG00000018040	cth1	99	83.386	Ictalurus_punctatus
ENSPNAG00000013147	cth1	90	53.356	ENSKMAG00000005944	cth1	96	55.696	Kryptolebias_marmoratus
ENSPNAG00000013147	cth1	90	59.801	ENSLBEG00000019253	cth1	97	57.975	Labrus_bergylta
ENSPNAG00000013147	cth1	63	57.635	ENSLOCG00000002047	cth1	98	57.635	Lepisosteus_oculatus
ENSPNAG00000013147	cth1	95	47.493	ENSMAMG00000001525	cth1	97	46.389	Mastacembelus_armatus
ENSPNAG00000013147	cth1	99	54.103	ENSMZEG00005022335	cth1	98	55.385	Maylandia_zebra
ENSPNAG00000013147	cth1	82	55.515	ENSMMOG00000020518	cth1	93	57.192	Mola_mola
ENSPNAG00000013147	cth1	99	44.081	ENSMALG00000020738	cth1	60	56.332	Monopterus_albus
ENSPNAG00000013147	cth1	94	53.268	ENSNBRG00000022789	cth1	95	53.896	Neolamprologus_brichardi
ENSPNAG00000013147	cth1	99	54.381	ENSONIG00000021318	cth1	95	56.962	Oreochromis_niloticus
ENSPNAG00000013147	cth1	90	52.189	ENSORLG00000022847	cth1	89	55.219	Oryzias_latipes
ENSPNAG00000013147	cth1	90	52.189	ENSORLG00020011979	cth1	89	56.229	Oryzias_latipes_hni
ENSPNAG00000013147	cth1	83	51.460	ENSORLG00015013084	cth1	89	55.219	Oryzias_latipes_hsok
ENSPNAG00000013147	cth1	83	53.160	ENSOMEG00000005809	cth1	85	50.606	Oryzias_melastigma
ENSPNAG00000013147	cth1	94	60.897	ENSPKIG00000015883	cth1	94	61.218	Paramormyrops_kingsleyae
ENSPNAG00000013147	cth1	59	64.390	ENSPMGG00000004275	cth1	87	56.291	Periophthalmus_magnuspinnatus
ENSPNAG00000013147	cth1	98	53.438	ENSPFOG00000013583	cth1	90	53.674	Poecilia_formosa
ENSPNAG00000013147	cth1	98	53.438	ENSPLAG00000018158	cth1	90	53.674	Poecilia_latipinna
ENSPNAG00000013147	cth1	98	54.062	ENSPMEG00000005744	cth1	96	54.313	Poecilia_mexicana
ENSPNAG00000013147	cth1	92	54.576	ENSPREG00000004099	cth1	96	52.351	Poecilia_reticulata
ENSPNAG00000013147	cth1	86	57.664	ENSPNYG00000016705	cth1	87	58.333	Pundamilia_nyererei
ENSPNAG00000013147	cth1	98	55.728	ENSSFOG00015017190	cth1	99	56.656	Scleropages_formosus
ENSPNAG00000013147	cth1	90	55.776	ENSSMAG00000007977	cth1	99	55.030	Scophthalmus_maximus
ENSPNAG00000013147	cth1	90	58.117	ENSSDUG00000004321	cth1	97	59.202	Seriola_dumerili
ENSPNAG00000013147	cth1	90	57.282	ENSSLDG00000004516	-	97	58.716	Seriola_lalandi_dorsalis
ENSPNAG00000013147	cth1	90	57.929	ENSSLDG00000012760	cth1	97	59.327	Seriola_lalandi_dorsalis
ENSPNAG00000013147	cth1	90	57.282	ENSSLDG00000010023	-	97	58.716	Seriola_lalandi_dorsalis
ENSPNAG00000013147	cth1	76	60.000	ENSSPAG00000018659	cth1	99	55.927	Stegastes_partitus
ENSPNAG00000013147	cth1	99	52.679	ENSTRUG00000012770	cth1	99	53.916	Takifugu_rubripes
ENSPNAG00000013147	cth1	95	53.750	ENSTNIG00000000740	cth1	97	51.964	Tetraodon_nigroviridis
ENSPNAG00000013147	cth1	84	52.593	ENSXCOG00000003710	cth1	90	52.399	Xiphophorus_couchianus
ENSPNAG00000013147	cth1	95	52.830	ENSXMAG00000023885	cth1	96	52.665	Xiphophorus_maculatus