EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000013396 (Gene tree)
Gene ID: 108443542
Gene Symbol: PRDM12 (1 of many)
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 12127 bases
Position: chrKV575851.1:399041-411167
Accession: 108443542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000007630	zf-C2H2	PF00096.26	5.6e-13	1	2
ENSPNAP00000007630	zf-C2H2	PF00096.26	5.6e-13	2	2
ENSPNAP00000007630	zf-met	PF12874.7	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000001504	PRDM12 (1 of many)-201	1080	XM_017724294	ENSPNAP00000007630	359 (aa)	XP_017579783	-

Gene Model

Click here to download ENSPNAG00000013396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000013396's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000013396	PRDM12	54	40.000	ENSPNAG00000023191	-	89	40.000
ENSPNAG00000013396	PRDM12	100	77.632	ENSPNAG00000024532	prdm12b	100	77.573
ENSPNAG00000013396	PRDM12	66	40.230	ENSPNAG00000026181	prdm5	93	40.230

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000013396	PRDM12	88	80.606	ENSG00000130711	PRDM12	99	74.462	Homo_sapiens
ENSPNAG00000013396	PRDM12	100	78.718	ENSAPOG00000016051	prdm12b	100	78.718	Acanthochromis_polyacanthus
ENSPNAG00000013396	PRDM12	99	62.602	ENSAPOG00000018234	-	100	60.417	Acanthochromis_polyacanthus
ENSPNAG00000013396	PRDM12	88	80.247	ENSAMEG00000016234	PRDM12	99	80.556	Ailuropoda_melanoleuca
ENSPNAG00000013396	PRDM12	100	77.344	ENSACIG00000019578	prdm12b	100	78.646	Amphilophus_citrinellus
ENSPNAG00000013396	PRDM12	100	75.515	ENSACIG00000005193	-	100	73.969	Amphilophus_citrinellus
ENSPNAG00000013396	PRDM12	100	79.634	ENSAOCG00000015040	prdm12b	100	79.634	Amphiprion_ocellaris
ENSPNAG00000013396	PRDM12	100	75.946	ENSAPEG00000022849	-	99	75.135	Amphiprion_percula
ENSPNAG00000013396	PRDM12	100	80.263	ENSAPEG00000015092	prdm12b	100	80.263	Amphiprion_percula
ENSPNAG00000013396	PRDM12	100	74.425	ENSATEG00000014595	-	96	80.236	Anabas_testudineus
ENSPNAG00000013396	PRDM12	92	78.261	ENSANAG00000020616	PRDM12	95	80.606	Aotus_nancymaae
ENSPNAG00000013396	PRDM12	100	83.380	ENSACLG00000011876	prdm12b	100	83.657	Astatotilapia_calliptera
ENSPNAG00000013396	PRDM12	100	74.177	ENSACLG00000007631	-	100	73.671	Astatotilapia_calliptera
ENSPNAG00000013396	PRDM12	100	77.984	ENSAMXG00000033665	prdm12b	100	77.984	Astyanax_mexicanus
ENSPNAG00000013396	PRDM12	100	88.122	ENSAMXG00000008540	PRDM12	100	87.845	Astyanax_mexicanus
ENSPNAG00000013396	PRDM12	88	80.547	ENSBTAG00000023797	PRDM12	99	74.731	Bos_taurus
ENSPNAG00000013396	PRDM12	88	80.606	ENSCJAG00000020540	PRDM12	99	74.462	Callithrix_jacchus
ENSPNAG00000013396	PRDM12	77	81.882	ENSCAFG00000023076	PRDM12	99	75.152	Canis_familiaris
ENSPNAG00000013396	PRDM12	88	80.547	ENSCAFG00020024046	PRDM12	99	74.731	Canis_lupus_dingo
ENSPNAG00000013396	PRDM12	88	80.547	ENSCHIG00000025005	PRDM12	99	74.731	Capra_hircus
ENSPNAG00000013396	PRDM12	92	76.163	ENSCPOG00000005901	PRDM12	99	77.711	Cavia_porcellus
ENSPNAG00000013396	PRDM12	88	80.606	ENSCCAG00000037485	PRDM12	99	74.462	Cebus_capucinus
ENSPNAG00000013396	PRDM12	88	80.606	ENSCATG00000020327	PRDM12	99	74.462	Cercocebus_atys
ENSPNAG00000013396	PRDM12	88	80.547	ENSCLAG00000005499	PRDM12	89	80.606	Chinchilla_lanigera
ENSPNAG00000013396	PRDM12	88	80.606	ENSCSAG00000014756	PRDM12	99	74.462	Chlorocebus_sabaeus
ENSPNAG00000013396	PRDM12	100	76.011	ENSCPBG00000022628	PRDM12	99	74.933	Chrysemys_picta_bellii
ENSPNAG00000013396	PRDM12	88	80.547	ENSCGRG00001015005	Prdm12	99	74.531	Cricetulus_griseus_chok1gshd
ENSPNAG00000013396	PRDM12	100	73.077	ENSCVAG00000000944	-	100	73.214	Cyprinodon_variegatus
ENSPNAG00000013396	PRDM12	100	78.478	ENSCVAG00000017166	prdm12b	100	78.740	Cyprinodon_variegatus
ENSPNAG00000013396	PRDM12	100	79.521	ENSDARG00000007430	prdm12b	100	79.521	Danio_rerio
ENSPNAG00000013396	PRDM12	88	80.000	ENSDNOG00000042302	PRDM12	99	74.531	Dasypus_novemcinctus
ENSPNAG00000013396	PRDM12	83	64.497	ENSEBUG00000016780	prdm12b	73	65.976	Eptatretus_burgeri
ENSPNAG00000013396	PRDM12	92	78.198	ENSEASG00005008472	PRDM12	99	74.731	Equus_asinus_asinus
ENSPNAG00000013396	PRDM12	92	78.198	ENSECAG00000005933	PRDM12	99	74.731	Equus_caballus
ENSPNAG00000013396	PRDM12	100	81.667	ENSELUG00000013674	PRDM12	99	81.389	Esox_lucius
ENSPNAG00000013396	PRDM12	100	77.573	ENSELUG00000009905	prdm12b	100	77.573	Esox_lucius
ENSPNAG00000013396	PRDM12	88	80.547	ENSFCAG00000043086	PRDM12	99	74.731	Felis_catus
ENSPNAG00000013396	PRDM12	100	76.882	ENSFALG00000001445	PRDM12	89	76.408	Ficedula_albicollis
ENSPNAG00000013396	PRDM12	100	76.350	ENSFHEG00000007746	-	100	74.870	Fundulus_heteroclitus
ENSPNAG00000013396	PRDM12	100	78.215	ENSFHEG00000003944	prdm12b	100	78.478	Fundulus_heteroclitus
ENSPNAG00000013396	PRDM12	88	84.545	ENSGMOG00000011797	prdm12b	92	84.592	Gadus_morhua
ENSPNAG00000013396	PRDM12	100	76.882	ENSGALG00000003895	PRDM12	99	76.064	Gallus_gallus
ENSPNAG00000013396	PRDM12	100	79.420	ENSGAFG00000010827	prdm12b	99	79.420	Gambusia_affinis
ENSPNAG00000013396	PRDM12	100	79.737	ENSGACG00000016713	prdm12b	99	79.211	Gasterosteus_aculeatus
ENSPNAG00000013396	PRDM12	100	76.011	ENSGAGG00000014083	PRDM12	99	74.933	Gopherus_agassizii
ENSPNAG00000013396	PRDM12	88	80.303	ENSGGOG00000010568	PRDM12	99	74.263	Gorilla_gorilla
ENSPNAG00000013396	PRDM12	100	78.740	ENSHBUG00000022878	prdm12b	100	79.265	Haplochromis_burtoni
ENSPNAG00000013396	PRDM12	100	74.177	ENSHBUG00000022537	-	93	73.671	Haplochromis_burtoni
ENSPNAG00000013396	PRDM12	88	80.243	ENSHGLG00000013939	PRDM12	99	74.194	Heterocephalus_glaber_female
ENSPNAG00000013396	PRDM12	100	74.595	ENSHCOG00000021167	-	100	73.171	Hippocampus_comes
ENSPNAG00000013396	PRDM12	88	79.310	ENSHCOG00000003663	prdm12b	100	73.116	Hippocampus_comes
ENSPNAG00000013396	PRDM12	100	79.310	ENSIPUG00000019544	PRDM12	100	79.310	Ictalurus_punctatus
ENSPNAG00000013396	PRDM12	100	77.632	ENSIPUG00000017053	prdm12b	100	77.454	Ictalurus_punctatus
ENSPNAG00000013396	PRDM12	93	77.971	ENSSTOG00000005986	PRDM12	85	80.547	Ictidomys_tridecemlineatus
ENSPNAG00000013396	PRDM12	88	80.547	ENSJJAG00000005424	Prdm12	98	80.909	Jaculus_jaculus
ENSPNAG00000013396	PRDM12	100	73.350	ENSKMAG00000016921	prdm12b	100	72.616	Kryptolebias_marmoratus
ENSPNAG00000013396	PRDM12	94	78.977	ENSKMAG00000021205	-	94	77.746	Kryptolebias_marmoratus
ENSPNAG00000013396	PRDM12	100	79.427	ENSLBEG00000017769	prdm12b	100	79.427	Labrus_bergylta
ENSPNAG00000013396	PRDM12	100	74.227	ENSLBEG00000007776	-	100	75.065	Labrus_bergylta
ENSPNAG00000013396	PRDM12	100	77.358	ENSLACG00000017560	PRDM12	99	76.280	Latimeria_chalumnae
ENSPNAG00000013396	PRDM12	100	78.552	ENSLOCG00000005429	prdm12b	99	79.893	Lepisosteus_oculatus
ENSPNAG00000013396	PRDM12	88	79.104	ENSLAFG00000006979	PRDM12	88	79.701	Loxodonta_africana
ENSPNAG00000013396	PRDM12	88	80.606	ENSMFAG00000040322	PRDM12	88	80.606	Macaca_fascicularis
ENSPNAG00000013396	PRDM12	88	80.606	ENSMNEG00000037234	PRDM12	99	74.462	Macaca_nemestrina
ENSPNAG00000013396	PRDM12	100	79.167	ENSMAMG00000013212	prdm12b	100	79.167	Mastacembelus_armatus
ENSPNAG00000013396	PRDM12	100	75.907	ENSMAMG00000018988	-	100	75.131	Mastacembelus_armatus
ENSPNAG00000013396	PRDM12	100	73.552	ENSMZEG00005000415	PRDM12	100	73.485	Maylandia_zebra
ENSPNAG00000013396	PRDM12	93	80.115	ENSMGAG00000005438	PRDM12	92	82.229	Meleagris_gallopavo
ENSPNAG00000013396	PRDM12	100	74.394	ENSMAUG00000013040	Prdm12	99	74.731	Mesocricetus_auratus
ENSPNAG00000013396	PRDM12	92	78.363	ENSMICG00000015480	PRDM12	90	80.909	Microcebus_murinus
ENSPNAG00000013396	PRDM12	99	74.932	ENSMOCG00000021026	Prdm12	89	81.212	Microtus_ochrogaster
ENSPNAG00000013396	PRDM12	100	77.089	ENSMODG00000012108	PRDM12	99	75.266	Monodelphis_domestica
ENSPNAG00000013396	PRDM12	80	78.758	ENSMALG00000021901	prdm12b	93	78.431	Monopterus_albus
ENSPNAG00000013396	PRDM12	88	80.547	MGP_CAROLIEiJ_G0023414	Prdm12	99	75.000	Mus_caroli
ENSPNAG00000013396	PRDM12	88	80.547	ENSMUSG00000079466	Prdm12	99	75.000	Mus_musculus
ENSPNAG00000013396	PRDM12	88	80.547	MGP_PahariEiJ_G0024871	Prdm12	99	75.000	Mus_pahari
ENSPNAG00000013396	PRDM12	88	80.547	MGP_SPRETEiJ_G0024331	Prdm12	99	75.000	Mus_spretus
ENSPNAG00000013396	PRDM12	88	80.547	ENSNGAG00000018480	Prdm12	99	73.656	Nannospalax_galili
ENSPNAG00000013396	PRDM12	100	72.944	ENSNBRG00000024312	-	100	72.414	Neolamprologus_brichardi
ENSPNAG00000013396	PRDM12	100	77.344	ENSNBRG00000006727	prdm12b	100	78.906	Neolamprologus_brichardi
ENSPNAG00000013396	PRDM12	100	70.081	ENSMEUG00000003828	PRDM12	99	68.351	Notamacropus_eugenii
ENSPNAG00000013396	PRDM12	88	80.606	ENSOPRG00000008680	PRDM12	98	80.606	Ochotona_princeps
ENSPNAG00000013396	PRDM12	92	78.488	ENSODEG00000016282	PRDM12	61	80.851	Octodon_degus
ENSPNAG00000013396	PRDM12	61	74.783	ENSOANG00000001043	PRDM12	100	74.026	Ornithorhynchus_anatinus
ENSPNAG00000013396	PRDM12	86	79.245	ENSOCUG00000008241	PRDM12	96	81.639	Oryctolagus_cuniculus
ENSPNAG00000013396	PRDM12	100	77.519	ENSORLG00000007114	prdm12b	99	77.778	Oryzias_latipes
ENSPNAG00000013396	PRDM12	100	73.214	ENSORLG00000017558	-	100	72.890	Oryzias_latipes
ENSPNAG00000013396	PRDM12	100	72.890	ENSORLG00020013167	-	100	72.564	Oryzias_latipes_hni
ENSPNAG00000013396	PRDM12	100	78.811	ENSORLG00020019565	prdm12b	99	78.553	Oryzias_latipes_hni
ENSPNAG00000013396	PRDM12	100	77.003	ENSORLG00015007621	prdm12b	99	77.720	Oryzias_latipes_hsok
ENSPNAG00000013396	PRDM12	100	73.214	ENSORLG00015003435	-	100	72.890	Oryzias_latipes_hsok
ENSPNAG00000013396	PRDM12	100	76.667	ENSOMEG00000004134	prdm12b	99	76.350	Oryzias_melastigma
ENSPNAG00000013396	PRDM12	100	73.522	ENSOMEG00000007762	-	100	73.265	Oryzias_melastigma
ENSPNAG00000013396	PRDM12	88	80.547	ENSOGAG00000007557	PRDM12	97	80.909	Otolemur_garnettii
ENSPNAG00000013396	PRDM12	78	77.740	ENSPPAG00000031506	-	99	76.510	Pan_paniscus
ENSPNAG00000013396	PRDM12	97	70.799	ENSPPRG00000023024	PRDM12	83	75.684	Panthera_pardus
ENSPNAG00000013396	PRDM12	88	80.606	ENSPTRG00000021475	PRDM12	99	74.531	Pan_troglodytes
ENSPNAG00000013396	PRDM12	88	80.606	ENSPTRG00000043324	-	99	74.531	Pan_troglodytes
ENSPNAG00000013396	PRDM12	88	80.606	ENSPANG00000025967	PRDM12	99	74.462	Papio_anubis
ENSPNAG00000013396	PRDM12	92	76.791	ENSPKIG00000004305	PRDM12	94	78.979	Paramormyrops_kingsleyae
ENSPNAG00000013396	PRDM12	100	76.702	ENSPKIG00000007228	prdm12b	100	76.702	Paramormyrops_kingsleyae
ENSPNAG00000013396	PRDM12	100	76.550	ENSPSIG00000006739	PRDM12	99	75.472	Pelodiscus_sinensis
ENSPNAG00000013396	PRDM12	100	80.267	ENSPMGG00000008867	prdm12b	99	80.000	Periophthalmus_magnuspinnatus
ENSPNAG00000013396	PRDM12	100	75.328	ENSPMGG00000002356	-	86	83.891	Periophthalmus_magnuspinnatus
ENSPNAG00000013396	PRDM12	93	76.124	ENSPEMG00000009969	Prdm12	89	80.909	Peromyscus_maniculatus_bairdii
ENSPNAG00000013396	PRDM12	100	77.089	ENSPCIG00000024119	PRDM12	99	75.266	Phascolarctos_cinereus
ENSPNAG00000013396	PRDM12	100	78.068	ENSPFOG00000019841	prdm12b	100	77.546	Poecilia_formosa
ENSPNAG00000013396	PRDM12	100	79.319	ENSPLAG00000016626	prdm12b	99	79.427	Poecilia_latipinna
ENSPNAG00000013396	PRDM12	96	79.891	ENSPMEG00000016698	prdm12b	99	79.348	Poecilia_mexicana
ENSPNAG00000013396	PRDM12	91	79.456	ENSPREG00000003211	-	90	77.946	Poecilia_reticulata
ENSPNAG00000013396	PRDM12	100	78.851	ENSPREG00000015073	prdm12b	99	79.112	Poecilia_reticulata
ENSPNAG00000013396	PRDM12	88	80.606	ENSPPYG00000019694	PRDM12	92	80.606	Pongo_abelii
ENSPNAG00000013396	PRDM12	88	80.547	ENSPCOG00000022255	PRDM12	99	74.799	Propithecus_coquereli
ENSPNAG00000013396	PRDM12	88	80.547	ENSPVAG00000001511	PRDM12	99	74.731	Pteropus_vampyrus
ENSPNAG00000013396	PRDM12	100	78.068	ENSPNYG00000009607	prdm12b	100	78.590	Pundamilia_nyererei
ENSPNAG00000013396	PRDM12	100	73.552	ENSPNYG00000013589	-	100	73.485	Pundamilia_nyererei
ENSPNAG00000013396	PRDM12	88	80.547	ENSRNOG00000009218	Prdm12	99	75.000	Rattus_norvegicus
ENSPNAG00000013396	PRDM12	86	80.124	ENSRBIG00000042712	PRDM12	88	79.448	Rhinopithecus_bieti
ENSPNAG00000013396	PRDM12	87	80.368	ENSRROG00000043554	PRDM12	99	80.368	Rhinopithecus_roxellana
ENSPNAG00000013396	PRDM12	100	76.613	ENSSHAG00000015972	PRDM12	99	74.801	Sarcophilus_harrisii
ENSPNAG00000013396	PRDM12	100	76.276	ENSSMAG00000003754	prdm12b	100	76.276	Scophthalmus_maximus
ENSPNAG00000013396	PRDM12	94	81.792	ENSSDUG00000019071	-	93	81.845	Seriola_dumerili
ENSPNAG00000013396	PRDM12	100	78.295	ENSSDUG00000023498	prdm12b	100	78.036	Seriola_dumerili
ENSPNAG00000013396	PRDM12	100	78.284	ENSSLDG00000013562	-	100	76.127	Seriola_lalandi_dorsalis
ENSPNAG00000013396	PRDM12	100	78.295	ENSSLDG00000009557	prdm12b	100	78.036	Seriola_lalandi_dorsalis
ENSPNAG00000013396	PRDM12	100	76.613	ENSSPUG00000013424	PRDM12	99	75.538	Sphenodon_punctatus
ENSPNAG00000013396	PRDM12	100	70.300	ENSSPAG00000022420	-	100	69.786	Stegastes_partitus
ENSPNAG00000013396	PRDM12	100	78.906	ENSSPAG00000018824	prdm12b	100	78.906	Stegastes_partitus
ENSPNAG00000013396	PRDM12	88	80.547	ENSSSCG00000005703	PRDM12	99	74.731	Sus_scrofa
ENSPNAG00000013396	PRDM12	100	79.733	ENSTRUG00000018659	prdm12b	100	80.267	Takifugu_rubripes
ENSPNAG00000013396	PRDM12	100	74.074	ENSTRUG00000013239	-	100	74.074	Takifugu_rubripes
ENSPNAG00000013396	PRDM12	100	78.667	ENSTNIG00000009020	prdm12b	99	79.200	Tetraodon_nigroviridis
ENSPNAG00000013396	PRDM12	100	76.503	ENSTNIG00000005859	-	99	75.956	Tetraodon_nigroviridis
ENSPNAG00000013396	PRDM12	88	80.547	ENSUAMG00000009653	PRDM12	90	80.909	Ursus_americanus
ENSPNAG00000013396	PRDM12	88	80.547	ENSVVUG00000027662	PRDM12	77	80.547	Vulpes_vulpes
ENSPNAG00000013396	PRDM12	100	79.101	ENSXCOG00000002836	prdm12b	99	79.101	Xiphophorus_couchianus
ENSPNAG00000013396	PRDM12	100	78.740	ENSXMAG00000005537	prdm12b	100	78.740	Xiphophorus_maculatus
ENSPNAG00000013396	PRDM12	100	76.923	ENSXMAG00000028012	-	100	75.332	Xiphophorus_maculatus