EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000013492 (Gene tree)
Gene ID: 108422391
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 85009 bases
Position: chrKV575301.1:2742722-2827730
Accession: 108422391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000007787	S1	PF00575.23	5.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000001252	SRBD1-201	3857	XM_017690591	ENSPNAP00000007787	977 (aa)	XP_017546080	UPI0008147BC9

Gene Model

Click here to download ENSPNAG00000013492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000013492's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000013492	SRBD1	95	57.364	ENSG00000068784	SRBD1	96	57.364	Homo_sapiens
ENSPNAG00000013492	SRBD1	100	65.748	ENSAPOG00000005103	si:ch211-117n7.8	96	66.770	Acanthochromis_polyacanthus
ENSPNAG00000013492	SRBD1	95	57.736	ENSAMEG00000005993	SRBD1	96	57.736	Ailuropoda_melanoleuca
ENSPNAG00000013492	SRBD1	97	64.688	ENSACIG00000009875	si:ch211-117n7.8	96	66.285	Amphilophus_citrinellus
ENSPNAG00000013492	SRBD1	100	65.252	ENSAOCG00000024718	si:ch211-117n7.8	94	67.722	Amphiprion_ocellaris
ENSPNAG00000013492	SRBD1	97	66.873	ENSAPEG00000002645	si:ch211-117n7.8	98	67.576	Amphiprion_percula
ENSPNAG00000013492	SRBD1	100	64.356	ENSATEG00000010844	si:ch211-117n7.8	95	66.841	Anabas_testudineus
ENSPNAG00000013492	SRBD1	96	58.273	ENSAPLG00000006313	SRBD1	96	58.169	Anas_platyrhynchos
ENSPNAG00000013492	SRBD1	95	56.818	ENSANAG00000025573	SRBD1	96	56.818	Aotus_nancymaae
ENSPNAG00000013492	SRBD1	97	65.365	ENSACLG00000024219	si:ch211-117n7.8	94	66.667	Astatotilapia_calliptera
ENSPNAG00000013492	SRBD1	100	82.477	ENSAMXG00000004294	SRBD1	100	82.477	Astyanax_mexicanus
ENSPNAG00000013492	SRBD1	90	59.598	ENSBTAG00000007508	SRBD1	86	59.375	Bos_taurus
ENSPNAG00000013492	SRBD1	95	56.921	ENSCJAG00000000727	SRBD1	96	56.921	Callithrix_jacchus
ENSPNAG00000013492	SRBD1	91	59.358	ENSCAFG00000002554	SRBD1	89	59.136	Canis_familiaris
ENSPNAG00000013492	SRBD1	86	61.933	ENSCAFG00020026284	SRBD1	98	62.053	Canis_lupus_dingo
ENSPNAG00000013492	SRBD1	90	59.375	ENSCHIG00000016535	SRBD1	87	59.152	Capra_hircus
ENSPNAG00000013492	SRBD1	94	57.306	ENSTSYG00000012797	SRBD1	96	57.306	Carlito_syrichta
ENSPNAG00000013492	SRBD1	94	57.733	ENSCPOG00000004773	SRBD1	96	57.733	Cavia_porcellus
ENSPNAG00000013492	SRBD1	95	57.025	ENSCCAG00000025589	SRBD1	96	56.921	Cebus_capucinus
ENSPNAG00000013492	SRBD1	95	56.982	ENSCATG00000039530	SRBD1	96	56.982	Cercocebus_atys
ENSPNAG00000013492	SRBD1	95	58.403	ENSCLAG00000008623	SRBD1	96	58.088	Chinchilla_lanigera
ENSPNAG00000013492	SRBD1	95	56.982	ENSCSAG00000013350	SRBD1	96	56.982	Chlorocebus_sabaeus
ENSPNAG00000013492	SRBD1	82	72.000	ENSCHOG00000003805	SRBD1	82	72.000	Choloepus_hoffmanni
ENSPNAG00000013492	SRBD1	85	62.073	ENSCPBG00000005677	SRBD1	97	58.455	Chrysemys_picta_bellii
ENSPNAG00000013492	SRBD1	79	40.684	ENSCING00000005950	-	99	40.202	Ciona_intestinalis
ENSPNAG00000013492	SRBD1	80	42.893	ENSCSAVG00000000861	-	99	43.093	Ciona_savignyi
ENSPNAG00000013492	SRBD1	95	56.982	ENSCANG00000016307	SRBD1	97	56.982	Colobus_angolensis_palliatus
ENSPNAG00000013492	SRBD1	85	61.639	ENSCGRG00001000513	Srbd1	85	61.520	Cricetulus_griseus_chok1gshd
ENSPNAG00000013492	SRBD1	85	61.639	ENSCGRG00000002283	Srbd1	85	61.520	Cricetulus_griseus_crigri
ENSPNAG00000013492	SRBD1	99	61.447	ENSCSEG00000000856	si:ch211-117n7.8	94	63.915	Cynoglossus_semilaevis
ENSPNAG00000013492	SRBD1	87	70.684	ENSCVAG00000020212	si:ch211-117n7.8	95	66.809	Cyprinodon_variegatus
ENSPNAG00000013492	SRBD1	95	56.205	ENSDNOG00000018686	SRBD1	96	55.897	Dasypus_novemcinctus
ENSPNAG00000013492	SRBD1	94	56.635	ENSDORG00000010468	Srbd1	96	56.635	Dipodomys_ordii
ENSPNAG00000013492	SRBD1	81	36.700	FBgn0051156	CG31156	81	36.836	Drosophila_melanogaster
ENSPNAG00000013492	SRBD1	86	61.496	ENSETEG00000000739	SRBD1	90	61.496	Echinops_telfairi
ENSPNAG00000013492	SRBD1	73	49.723	ENSEBUG00000008902	si:ch211-117n7.8	96	49.723	Eptatretus_burgeri
ENSPNAG00000013492	SRBD1	95	54.845	ENSEASG00005003132	SRBD1	94	63.032	Equus_asinus_asinus
ENSPNAG00000013492	SRBD1	95	56.804	ENSECAG00000013865	SRBD1	95	57.010	Equus_caballus
ENSPNAG00000013492	SRBD1	100	68.876	ENSELUG00000012592	si:ch211-117n7.8	92	72.794	Esox_lucius
ENSPNAG00000013492	SRBD1	95	57.128	ENSFCAG00000005101	SRBD1	96	57.541	Felis_catus
ENSPNAG00000013492	SRBD1	90	60.497	ENSFALG00000012966	SRBD1	97	57.592	Ficedula_albicollis
ENSPNAG00000013492	SRBD1	94	58.051	ENSFDAG00000016670	SRBD1	97	57.627	Fukomys_damarensis
ENSPNAG00000013492	SRBD1	100	63.743	ENSFHEG00000019480	si:ch211-117n7.8	93	66.456	Fundulus_heteroclitus
ENSPNAG00000013492	SRBD1	50	67.840	ENSGMOG00000018010	-	100	66.197	Gadus_morhua
ENSPNAG00000013492	SRBD1	94	58.132	ENSGALG00000009990	SRBD1	97	58.325	Gallus_gallus
ENSPNAG00000013492	SRBD1	99	65.269	ENSGAFG00000019664	si:ch211-117n7.8	94	67.334	Gambusia_affinis
ENSPNAG00000013492	SRBD1	63	72.627	ENSGACG00000010794	si:ch211-117n7.8	100	72.943	Gasterosteus_aculeatus
ENSPNAG00000013492	SRBD1	86	60.739	ENSGAGG00000006166	SRBD1	99	62.799	Gopherus_agassizii
ENSPNAG00000013492	SRBD1	95	57.216	ENSGGOG00000005910	SRBD1	99	57.216	Gorilla_gorilla
ENSPNAG00000013492	SRBD1	97	57.775	ENSHBUG00000013207	si:ch211-117n7.8	97	58.898	Haplochromis_burtoni
ENSPNAG00000013492	SRBD1	94	57.534	ENSHGLG00000018153	-	96	57.113	Heterocephalus_glaber_female
ENSPNAG00000013492	SRBD1	94	57.534	ENSHGLG00100015183	-	96	57.113	Heterocephalus_glaber_male
ENSPNAG00000013492	SRBD1	99	79.516	ENSIPUG00000009661	srbd1	99	79.717	Ictalurus_punctatus
ENSPNAG00000013492	SRBD1	95	57.856	ENSSTOG00000005898	SRBD1	96	57.232	Ictidomys_tridecemlineatus
ENSPNAG00000013492	SRBD1	98	54.433	ENSJJAG00000022244	Srbd1	95	55.308	Jaculus_jaculus
ENSPNAG00000013492	SRBD1	97	66.565	ENSKMAG00000003473	si:ch211-117n7.8	95	67.503	Kryptolebias_marmoratus
ENSPNAG00000013492	SRBD1	100	63.930	ENSLBEG00000027518	si:ch211-117n7.8	95	66.079	Labrus_bergylta
ENSPNAG00000013492	SRBD1	86	62.324	ENSLACG00000009790	SRBD1	100	62.207	Latimeria_chalumnae
ENSPNAG00000013492	SRBD1	93	68.493	ENSLOCG00000016360	si:ch211-117n7.8	97	66.426	Lepisosteus_oculatus
ENSPNAG00000013492	SRBD1	95	56.982	ENSMFAG00000042026	SRBD1	96	56.982	Macaca_fascicularis
ENSPNAG00000013492	SRBD1	95	56.879	ENSMMUG00000003490	SRBD1	96	56.879	Macaca_mulatta
ENSPNAG00000013492	SRBD1	95	55.749	ENSMNEG00000034701	SRBD1	96	55.749	Macaca_nemestrina
ENSPNAG00000013492	SRBD1	95	57.084	ENSMLEG00000000745	SRBD1	96	57.084	Mandrillus_leucophaeus
ENSPNAG00000013492	SRBD1	100	64.712	ENSMAMG00000021921	si:ch211-117n7.8	94	67.018	Mastacembelus_armatus
ENSPNAG00000013492	SRBD1	97	65.365	ENSMZEG00005027369	si:ch211-117n7.8	94	66.667	Maylandia_zebra
ENSPNAG00000013492	SRBD1	81	60.599	ENSMGAG00000010273	SRBD1	100	59.975	Meleagris_gallopavo
ENSPNAG00000013492	SRBD1	80	59.803	ENSMAUG00000013916	Srbd1	95	59.533	Mesocricetus_auratus
ENSPNAG00000013492	SRBD1	95	56.450	ENSMICG00000007835	SRBD1	96	56.760	Microcebus_murinus
ENSPNAG00000013492	SRBD1	98	55.979	ENSMOCG00000018716	Srbd1	96	56.586	Microtus_ochrogaster
ENSPNAG00000013492	SRBD1	97	64.278	ENSMMOG00000007507	si:ch211-117n7.8	97	65.295	Mola_mola
ENSPNAG00000013492	SRBD1	99	63.824	ENSMALG00000001562	si:ch211-117n7.8	92	66.667	Monopterus_albus
ENSPNAG00000013492	SRBD1	93	57.249	MGP_CAROLIEiJ_G0021934	Srbd1	99	61.184	Mus_caroli
ENSPNAG00000013492	SRBD1	93	57.143	ENSMUSG00000024135	Srbd1	99	57.914	Mus_musculus
ENSPNAG00000013492	SRBD1	85	60.926	MGP_PahariEiJ_G0020924	Srbd1	85	60.689	Mus_pahari
ENSPNAG00000013492	SRBD1	93	57.356	MGP_SPRETEiJ_G0022850	Srbd1	95	57.082	Mus_spretus
ENSPNAG00000013492	SRBD1	95	57.158	ENSMLUG00000007039	SRBD1	96	56.656	Myotis_lucifugus
ENSPNAG00000013492	SRBD1	99	53.475	ENSNGAG00000011893	Srbd1	96	54.813	Nannospalax_galili
ENSPNAG00000013492	SRBD1	97	64.410	ENSNBRG00000012873	si:ch211-117n7.8	96	65.717	Neolamprologus_brichardi
ENSPNAG00000013492	SRBD1	95	56.937	ENSNLEG00000016877	SRBD1	96	56.937	Nomascus_leucogenys
ENSPNAG00000013492	SRBD1	95	57.354	ENSODEG00000012095	SRBD1	96	57.037	Octodon_degus
ENSPNAG00000013492	SRBD1	98	64.625	ENSONIG00000000945	si:ch211-117n7.8	100	72.262	Oreochromis_niloticus
ENSPNAG00000013492	SRBD1	94	57.500	ENSOCUG00000015385	SRBD1	96	57.188	Oryctolagus_cuniculus
ENSPNAG00000013492	SRBD1	100	60.352	ENSORLG00000004427	si:ch211-117n7.8	94	62.487	Oryzias_latipes
ENSPNAG00000013492	SRBD1	100	63.060	ENSORLG00020012792	si:ch211-117n7.8	94	65.424	Oryzias_latipes_hni
ENSPNAG00000013492	SRBD1	100	62.829	ENSORLG00015018598	si:ch211-117n7.8	94	65.181	Oryzias_latipes_hsok
ENSPNAG00000013492	SRBD1	98	64.064	ENSOMEG00000012229	si:ch211-117n7.8	93	67.424	Oryzias_melastigma
ENSPNAG00000013492	SRBD1	95	54.865	ENSOGAG00000001076	SRBD1	97	54.451	Otolemur_garnettii
ENSPNAG00000013492	SRBD1	91	55.603	ENSOARG00000005958	SRBD1	90	55.176	Ovis_aries
ENSPNAG00000013492	SRBD1	95	55.873	ENSPPAG00000038442	SRBD1	96	57.055	Pan_paniscus
ENSPNAG00000013492	SRBD1	95	57.601	ENSPPRG00000003449	SRBD1	96	57.601	Panthera_pardus
ENSPNAG00000013492	SRBD1	95	57.379	ENSPTIG00000012495	SRBD1	96	57.379	Panthera_tigris_altaica
ENSPNAG00000013492	SRBD1	95	56.078	ENSPTRG00000011889	SRBD1	96	57.158	Pan_troglodytes
ENSPNAG00000013492	SRBD1	95	57.084	ENSPANG00000008063	SRBD1	96	57.084	Papio_anubis
ENSPNAG00000013492	SRBD1	99	66.226	ENSPKIG00000021973	si:ch211-117n7.8	96	67.697	Paramormyrops_kingsleyae
ENSPNAG00000013492	SRBD1	92	58.963	ENSPSIG00000008992	SRBD1	97	58.081	Pelodiscus_sinensis
ENSPNAG00000013492	SRBD1	86	68.978	ENSPMGG00000013348	si:ch211-117n7.8	97	64.581	Periophthalmus_magnuspinnatus
ENSPNAG00000013492	SRBD1	85	60.371	ENSPEMG00000020684	Srbd1	85	60.023	Peromyscus_maniculatus_bairdii
ENSPNAG00000013492	SRBD1	97	67.039	ENSPFOG00000010650	si:ch211-117n7.8	96	67.318	Poecilia_formosa
ENSPNAG00000013492	SRBD1	97	67.039	ENSPLAG00000002141	si:ch211-117n7.8	94	68.168	Poecilia_latipinna
ENSPNAG00000013492	SRBD1	97	66.937	ENSPMEG00000018537	si:ch211-117n7.8	96	67.215	Poecilia_mexicana
ENSPNAG00000013492	SRBD1	99	65.358	ENSPREG00000003258	si:ch211-117n7.8	96	66.771	Poecilia_reticulata
ENSPNAG00000013492	SRBD1	95	53.262	ENSPPYG00000012444	SRBD1	96	53.165	Pongo_abelii
ENSPNAG00000013492	SRBD1	77	56.267	ENSPCAG00000005629	SRBD1	80	56.267	Procavia_capensis
ENSPNAG00000013492	SRBD1	95	48.768	ENSPCOG00000017669	SRBD1	96	48.768	Propithecus_coquereli
ENSPNAG00000013492	SRBD1	95	50.930	ENSPVAG00000001782	SRBD1	96	51.033	Pteropus_vampyrus
ENSPNAG00000013492	SRBD1	97	62.168	ENSPNYG00000000508	si:ch211-117n7.8	97	63.407	Pundamilia_nyererei
ENSPNAG00000013492	SRBD1	85	61.429	ENSRNOG00000014720	Srbd1	85	61.310	Rattus_norvegicus
ENSPNAG00000013492	SRBD1	95	56.879	ENSRBIG00000033486	SRBD1	97	56.879	Rhinopithecus_bieti
ENSPNAG00000013492	SRBD1	95	56.879	ENSRROG00000041599	SRBD1	97	56.879	Rhinopithecus_roxellana
ENSPNAG00000013492	SRBD1	95	56.625	ENSSBOG00000024982	SRBD1	96	56.625	Saimiri_boliviensis_boliviensis
ENSPNAG00000013492	SRBD1	97	66.947	ENSSFOG00015001128	si:ch211-117n7.8	99	67.166	Scleropages_formosus
ENSPNAG00000013492	SRBD1	97	63.509	ENSSMAG00000018256	si:ch211-117n7.8	96	64.097	Scophthalmus_maximus
ENSPNAG00000013492	SRBD1	94	65.699	ENSSLDG00000023189	si:ch211-117n7.8	97	65.749	Seriola_lalandi_dorsalis
ENSPNAG00000013492	SRBD1	93	53.098	ENSSARG00000009740	SRBD1	95	52.828	Sorex_araneus
ENSPNAG00000013492	SRBD1	85	63.290	ENSSPUG00000010475	SRBD1	99	59.563	Sphenodon_punctatus
ENSPNAG00000013492	SRBD1	93	67.565	ENSSPAG00000008092	-	93	66.843	Stegastes_partitus
ENSPNAG00000013492	SRBD1	95	57.421	ENSSSCG00000008445	SRBD1	95	57.451	Sus_scrofa
ENSPNAG00000013492	SRBD1	84	62.081	ENSTGUG00000003878	SRBD1	100	61.962	Taeniopygia_guttata
ENSPNAG00000013492	SRBD1	99	62.391	ENSTRUG00000007080	si:ch211-117n7.8	96	69.521	Takifugu_rubripes
ENSPNAG00000013492	SRBD1	97	63.280	ENSTNIG00000007464	si:ch211-117n7.8	96	62.857	Tetraodon_nigroviridis
ENSPNAG00000013492	SRBD1	75	82.979	ENSTBEG00000004556	SRBD1	74	82.979	Tupaia_belangeri
ENSPNAG00000013492	SRBD1	84	59.935	ENSTTRG00000011871	SRBD1	78	61.932	Tursiops_truncatus
ENSPNAG00000013492	SRBD1	95	56.906	ENSUAMG00000008126	SRBD1	97	57.609	Ursus_americanus
ENSPNAG00000013492	SRBD1	95	57.009	ENSUMAG00000012902	SRBD1	95	57.113	Ursus_maritimus
ENSPNAG00000013492	SRBD1	88	60.523	ENSVPAG00000006825	SRBD1	95	60.523	Vicugna_pacos
ENSPNAG00000013492	SRBD1	91	59.424	ENSVVUG00000005389	SRBD1	89	59.202	Vulpes_vulpes
ENSPNAG00000013492	SRBD1	98	48.249	ENSXETG00000002760	srbd1	94	49.080	Xenopus_tropicalis
ENSPNAG00000013492	SRBD1	99	65.507	ENSXMAG00000016861	si:ch211-117n7.8	94	67.644	Xiphophorus_maculatus