EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000013558 (Gene tree)
Gene ID: 108437001
Gene Symbol: -
Alias: -
Full Name: FA complementation group M
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 64894 bases
Position: chrKV575508.1:382518-447411
Accession: 108437001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000028001	ResIII	PF04851.15	2e-08	1	1
ENSPNAP00000028001	DEAD	PF00270.29	7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000001101	-	6755	XM_017713804	ENSPNAP00000028001	1918 (aa)	XP_017569293	-

Gene Model

Click here to download ENSPNAG00000013558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000013558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000013558	-	80	50.408	ENSG00000187790	FANCM	97	54.597	Homo_sapiens
ENSPNAG00000013558	-	80	51.111	ENSAMEG00000002114	FANCM	79	51.519	Ailuropoda_melanoleuca
ENSPNAG00000013558	-	99	43.300	ENSATEG00000012412	-	99	44.166	Anabas_testudineus
ENSPNAG00000013558	-	99	36.564	ENSANAG00000025075	FANCM	99	36.359	Aotus_nancymaae
ENSPNAG00000013558	-	99	43.352	ENSACLG00000016008	-	99	43.577	Astatotilapia_calliptera
ENSPNAG00000013558	-	88	57.734	ENSAMXG00000020275	-	98	57.904	Astyanax_mexicanus
ENSPNAG00000013558	-	99	37.352	ENSBTAG00000002612	FANCM	95	51.128	Bos_taurus
ENSPNAG00000013558	-	99	36.287	ENSCJAG00000015945	FANCM	99	36.427	Callithrix_jacchus
ENSPNAG00000013558	-	80	50.584	ENSCAFG00000014062	FANCM	91	39.970	Canis_familiaris
ENSPNAG00000013558	-	80	51.572	ENSCHIG00000015176	FANCM	72	51.921	Capra_hircus
ENSPNAG00000013558	-	74	50.530	ENSCPOG00000001446	FANCM	71	50.530	Cavia_porcellus
ENSPNAG00000013558	-	80	50.235	ENSCCAG00000026593	FANCM	78	50.235	Cebus_capucinus
ENSPNAG00000013558	-	84	50.467	ENSCATG00000031379	FANCM	79	50.467	Cercocebus_atys
ENSPNAG00000013558	-	84	49.883	ENSCSAG00000015308	FANCM	79	49.883	Chlorocebus_sabaeus
ENSPNAG00000013558	-	89	39.954	ENSCPBG00000015089	FANCM	99	37.142	Chrysemys_picta_bellii
ENSPNAG00000013558	-	84	50.234	ENSCANG00000029498	FANCM	99	36.987	Colobus_angolensis_palliatus
ENSPNAG00000013558	-	80	50.597	ENSCGRG00001023573	Fancm	77	50.597	Cricetulus_griseus_chok1gshd
ENSPNAG00000013558	-	99	44.403	ENSCSEG00000002313	-	99	44.768	Cynoglossus_semilaevis
ENSPNAG00000013558	-	85	48.996	ENSCVAG00000015579	-	93	49.231	Cyprinodon_variegatus
ENSPNAG00000013558	-	79	51.261	ENSDNOG00000007697	FANCM	82	50.230	Dasypus_novemcinctus
ENSPNAG00000013558	-	96	38.314	ENSDORG00000010095	Fancm	97	38.062	Dipodomys_ordii
ENSPNAG00000013558	-	52	54.573	ENSETEG00000003360	FANCM	51	54.573	Echinops_telfairi
ENSPNAG00000013558	-	62	51.166	ENSEASG00005007781	FANCM	99	54.357	Equus_asinus_asinus
ENSPNAG00000013558	-	68	51.399	ENSECAG00000018694	FANCM	55	51.583	Equus_caballus
ENSPNAG00000013558	-	81	49.115	ENSELUG00000015761	-	94	49.689	Esox_lucius
ENSPNAG00000013558	-	73	49.861	ENSFALG00000001703	FANCM	71	49.861	Ficedula_albicollis
ENSPNAG00000013558	-	80	50.816	ENSFDAG00000009043	FANCM	74	50.816	Fukomys_damarensis
ENSPNAG00000013558	-	79	58.649	ENSGMOG00000002019	-	96	58.789	Gadus_morhua
ENSPNAG00000013558	-	67	53.479	ENSGALG00000031182	FANCM	67	51.974	Gallus_gallus
ENSPNAG00000013558	-	95	61.538	ENSGACG00000009448	-	93	61.538	Gasterosteus_aculeatus
ENSPNAG00000013558	-	84	50.525	ENSGGOG00000008546	FANCM	79	50.525	Gorilla_gorilla
ENSPNAG00000013558	-	99	43.506	ENSHBUG00000007085	-	99	43.710	Haplochromis_burtoni
ENSPNAG00000013558	-	80	50.059	ENSHGLG00000013787	FANCM	75	50.410	Heterocephalus_glaber_female
ENSPNAG00000013558	-	80	50.059	ENSHGLG00100006377	FANCM	75	50.410	Heterocephalus_glaber_male
ENSPNAG00000013558	-	100	58.566	ENSIPUG00000014629	fancm	99	58.955	Ictalurus_punctatus
ENSPNAG00000013558	-	76	49.857	ENSLBEG00000004982	-	98	43.001	Labrus_bergylta
ENSPNAG00000013558	-	100	38.529	ENSLACG00000007739	FANCM	99	38.483	Latimeria_chalumnae
ENSPNAG00000013558	-	100	44.794	ENSLOCG00000011318	FANCM	99	44.794	Lepisosteus_oculatus
ENSPNAG00000013558	-	79	50.896	ENSLAFG00000001136	FANCM	78	51.049	Loxodonta_africana
ENSPNAG00000013558	-	84	50.117	ENSMFAG00000000383	FANCM	83	50.117	Macaca_fascicularis
ENSPNAG00000013558	-	84	50.117	ENSMMUG00000016513	FANCM	83	50.117	Macaca_mulatta
ENSPNAG00000013558	-	84	50.292	ENSMNEG00000038659	FANCM	83	50.292	Macaca_nemestrina
ENSPNAG00000013558	-	69	53.231	ENSMLEG00000035743	FANCM	77	53.231	Mandrillus_leucophaeus
ENSPNAG00000013558	-	99	43.496	ENSMAMG00000007087	-	99	44.250	Mastacembelus_armatus
ENSPNAG00000013558	-	99	43.541	ENSMZEG00005004644	-	99	43.643	Maylandia_zebra
ENSPNAG00000013558	-	80	47.733	ENSMAUG00000015450	Fancm	89	41.176	Mesocricetus_auratus
ENSPNAG00000013558	-	84	51.628	ENSMICG00000005811	FANCM	79	51.628	Microcebus_murinus
ENSPNAG00000013558	-	73	50.837	ENSMOCG00000008775	Fancm	71	51.196	Microtus_ochrogaster
ENSPNAG00000013558	-	89	47.217	ENSMMOG00000010215	-	86	50.183	Mola_mola
ENSPNAG00000013558	-	67	48.897	ENSMODG00000007334	FANCM	78	48.897	Monodelphis_domestica
ENSPNAG00000013558	-	99	36.141	MGP_CAROLIEiJ_G0017791	Fancm	92	44.907	Mus_caroli
ENSPNAG00000013558	-	91	50.058	ENSMUSG00000055884	Fancm	95	54.208	Mus_musculus
ENSPNAG00000013558	-	83	48.975	MGP_PahariEiJ_G0029547	Fancm	74	49.155	Mus_pahari
ENSPNAG00000013558	-	64	49.707	MGP_SPRETEiJ_G0018636	Fancm	82	49.824	Mus_spretus
ENSPNAG00000013558	-	80	50.116	ENSMPUG00000004849	FANCM	79	50.116	Mustela_putorius_furo
ENSPNAG00000013558	-	84	50.175	ENSMLUG00000006671	FANCM	83	50.175	Myotis_lucifugus
ENSPNAG00000013558	-	84	48.832	ENSNGAG00000017199	Fancm	76	48.949	Nannospalax_galili
ENSPNAG00000013558	-	99	36.904	ENSNLEG00000004432	FANCM	99	36.746	Nomascus_leucogenys
ENSPNAG00000013558	-	58	48.257	ENSMEUG00000004977	-	60	44.684	Notamacropus_eugenii
ENSPNAG00000013558	-	85	58.522	ENSONIG00000003531	-	90	58.522	Oreochromis_niloticus
ENSPNAG00000013558	-	79	52.743	ENSOANG00000013997	FANCM	71	52.883	Ornithorhynchus_anatinus
ENSPNAG00000013558	-	99	37.335	ENSOCUG00000007539	FANCM	99	37.258	Oryctolagus_cuniculus
ENSPNAG00000013558	-	94	51.750	ENSORLG00000014503	-	99	43.557	Oryzias_latipes
ENSPNAG00000013558	-	66	54.444	ENSORLG00020013516	-	99	43.845	Oryzias_latipes_hni
ENSPNAG00000013558	-	66	54.244	ENSORLG00015012100	-	99	43.962	Oryzias_latipes_hsok
ENSPNAG00000013558	-	96	51.675	ENSOMEG00000010717	-	99	45.131	Oryzias_melastigma
ENSPNAG00000013558	-	77	52.423	ENSOGAG00000003015	FANCM	78	50.407	Otolemur_garnettii
ENSPNAG00000013558	-	80	51.804	ENSOARG00000009429	FANCM	79	52.154	Ovis_aries
ENSPNAG00000013558	-	84	50.642	ENSPPAG00000028944	FANCM	79	50.642	Pan_paniscus
ENSPNAG00000013558	-	84	50.292	ENSPTRG00000006307	FANCM	79	50.292	Pan_troglodytes
ENSPNAG00000013558	-	84	50.234	ENSPANG00000023200	FANCM	79	50.234	Papio_anubis
ENSPNAG00000013558	-	75	50.000	ENSPEMG00000005619	Fancm	82	50.000	Peromyscus_maniculatus_bairdii
ENSPNAG00000013558	-	76	59.603	ENSPFOG00000002008	-	81	59.727	Poecilia_formosa
ENSPNAG00000013558	-	99	44.558	ENSPLAG00000014164	-	99	44.878	Poecilia_latipinna
ENSPNAG00000013558	-	99	45.212	ENSPMEG00000010746	-	99	45.562	Poecilia_mexicana
ENSPNAG00000013558	-	99	44.732	ENSPREG00000019849	-	99	44.993	Poecilia_reticulata
ENSPNAG00000013558	-	72	50.703	ENSPPYG00000005781	FANCM	70	50.703	Pongo_abelii
ENSPNAG00000013558	-	66	52.558	ENSPCAG00000011363	-	54	52.558	Procavia_capensis
ENSPNAG00000013558	-	69	45.894	ENSPCOG00000014388	FANCM	63	45.894	Propithecus_coquereli
ENSPNAG00000013558	-	68	51.546	ENSPVAG00000015802	FANCM	63	51.546	Pteropus_vampyrus
ENSPNAG00000013558	-	84	48.721	ENSRNOG00000056721	Fancm	98	42.360	Rattus_norvegicus
ENSPNAG00000013558	-	84	49.767	ENSRBIG00000011451	FANCM	79	49.767	Rhinopithecus_bieti
ENSPNAG00000013558	-	84	50.000	ENSRROG00000028917	FANCM	79	50.000	Rhinopithecus_roxellana
ENSPNAG00000013558	-	99	36.237	ENSSBOG00000030882	FANCM	99	36.160	Saimiri_boliviensis_boliviensis
ENSPNAG00000013558	-	68	53.005	ENSSHAG00000000507	FANCM	72	59.770	Sarcophilus_harrisii
ENSPNAG00000013558	-	99	44.590	ENSSMAG00000019903	-	99	54.479	Scophthalmus_maximus
ENSPNAG00000013558	-	69	47.459	ENSSDUG00000016682	-	90	70.548	Seriola_dumerili
ENSPNAG00000013558	-	97	47.294	ENSSLDG00000003408	-	94	47.152	Seriola_lalandi_dorsalis
ENSPNAG00000013558	-	58	53.752	ENSSARG00000002618	FANCM	51	53.752	Sorex_araneus
ENSPNAG00000013558	-	84	50.877	ENSSSCG00000005000	FANCM	82	49.132	Sus_scrofa
ENSPNAG00000013558	-	99	44.074	ENSTNIG00000017277	-	99	44.136	Tetraodon_nigroviridis
ENSPNAG00000013558	-	90	43.478	ENSTTRG00000006669	FANCM	89	43.478	Tursiops_truncatus
ENSPNAG00000013558	-	67	54.648	ENSVPAG00000005763	FANCM	57	54.648	Vicugna_pacos
ENSPNAG00000013558	-	80	50.701	ENSVVUG00000000357	FANCM	79	50.584	Vulpes_vulpes
ENSPNAG00000013558	-	99	45.088	ENSXMAG00000007702	-	99	45.544	Xiphophorus_maculatus