EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000013684 (Gene tree)
Gene ID: 108426830
Gene Symbol: urb2
Alias: fc13e02|si:dkey-162b3.2|wu:fc13e02
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 13928 bases
Position: chrKV575331.1:1823983-1837910
Accession: 108426830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000008039	Urb2	PF10441.9	5.1e-20	1	1
ENSPNAP00000028101	Urb2	PF10441.9	5.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000000829	-	5987	XM_017696592	ENSPNAP00000008039	1507 (aa)	XP_017552081	UPI0008145B70
ENSPNAT00000000819	-	5606	XM_017696594	ENSPNAP00000028101	1507 (aa)	XP_017552083	UPI0008145B70

Gene Model

Click here to download ENSPNAG00000013684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000013684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000013684	urb2	100	36.930	ENSG00000135763	URB2	100	60.000	Homo_sapiens
ENSPNAG00000013684	urb2	88	43.641	ENSAPOG00000000608	urb2	94	43.850	Acanthochromis_polyacanthus
ENSPNAG00000013684	urb2	99	37.097	ENSAMEG00000009206	URB2	99	37.097	Ailuropoda_melanoleuca
ENSPNAG00000013684	urb2	99	43.600	ENSAOCG00000019961	urb2	99	43.780	Amphiprion_ocellaris
ENSPNAG00000013684	urb2	99	43.694	ENSAPEG00000005263	urb2	99	43.873	Amphiprion_percula
ENSPNAG00000013684	urb2	99	41.373	ENSATEG00000020930	urb2	99	41.844	Anabas_testudineus
ENSPNAG00000013684	urb2	97	39.316	ENSAPLG00000002998	URB2	100	39.566	Anas_platyrhynchos
ENSPNAG00000013684	urb2	100	39.490	ENSACAG00000001285	URB2	100	39.392	Anolis_carolinensis
ENSPNAG00000013684	urb2	100	36.832	ENSANAG00000033963	URB2	100	36.832	Aotus_nancymaae
ENSPNAG00000013684	urb2	89	43.057	ENSACLG00000009254	urb2	94	43.266	Astatotilapia_calliptera
ENSPNAG00000013684	urb2	100	70.809	ENSAMXG00000003474	urb2	100	70.809	Astyanax_mexicanus
ENSPNAG00000013684	urb2	99	36.808	ENSBTAG00000010180	URB2	99	36.808	Bos_taurus
ENSPNAG00000013684	urb2	95	57.042	ENSCJAG00000010968	URB2	100	57.042	Callithrix_jacchus
ENSPNAG00000013684	urb2	100	36.716	ENSCAFG00000012118	URB2	100	36.716	Canis_familiaris
ENSPNAG00000013684	urb2	93	35.428	ENSCAFG00020027217	URB2	99	35.428	Canis_lupus_dingo
ENSPNAG00000013684	urb2	99	36.387	ENSCHIG00000014513	URB2	99	36.387	Capra_hircus
ENSPNAG00000013684	urb2	99	36.129	ENSTSYG00000006924	URB2	99	36.247	Carlito_syrichta
ENSPNAG00000013684	urb2	64	45.210	ENSCPOG00000020777	-	100	45.210	Cavia_porcellus
ENSPNAG00000013684	urb2	100	37.411	ENSCCAG00000023932	URB2	100	37.411	Cebus_capucinus
ENSPNAG00000013684	urb2	100	36.975	ENSCATG00000043366	URB2	100	37.058	Cercocebus_atys
ENSPNAG00000013684	urb2	100	37.275	ENSCLAG00000006268	URB2	100	37.283	Chinchilla_lanigera
ENSPNAG00000013684	urb2	100	36.970	ENSCSAG00000010599	URB2	100	37.028	Chlorocebus_sabaeus
ENSPNAG00000013684	urb2	62	49.772	ENSCHOG00000010163	URB2	64	49.545	Choloepus_hoffmanni
ENSPNAG00000013684	urb2	100	41.206	ENSCPBG00000006191	URB2	100	41.206	Chrysemys_picta_bellii
ENSPNAG00000013684	urb2	100	36.768	ENSCANG00000023711	URB2	100	37.042	Colobus_angolensis_palliatus
ENSPNAG00000013684	urb2	100	36.282	ENSCGRG00001009591	Urb2	100	36.282	Cricetulus_griseus_chok1gshd
ENSPNAG00000013684	urb2	100	36.282	ENSCGRG00000011259	Urb2	100	36.282	Cricetulus_griseus_crigri
ENSPNAG00000013684	urb2	99	40.085	ENSCSEG00000000299	urb2	99	40.146	Cynoglossus_semilaevis
ENSPNAG00000013684	urb2	99	42.284	ENSCVAG00000011011	urb2	99	42.362	Cyprinodon_variegatus
ENSPNAG00000013684	urb2	99	60.592	ENSDARG00000003217	urb2	99	74.554	Danio_rerio
ENSPNAG00000013684	urb2	97	33.401	ENSDNOG00000043064	URB2	99	34.005	Dasypus_novemcinctus
ENSPNAG00000013684	urb2	100	36.023	ENSDORG00000014975	Urb2	100	36.023	Dipodomys_ordii
ENSPNAG00000013684	urb2	95	38.298	ENSETEG00000002869	URB2	95	38.298	Echinops_telfairi
ENSPNAG00000013684	urb2	99	37.468	ENSEASG00005012060	URB2	99	37.524	Equus_asinus_asinus
ENSPNAG00000013684	urb2	91	57.042	ENSECAG00000012338	URB2	99	57.042	Equus_caballus
ENSPNAG00000013684	urb2	92	53.521	ENSEEUG00000002669	URB2	92	53.521	Erinaceus_europaeus
ENSPNAG00000013684	urb2	99	55.303	ENSELUG00000014647	urb2	99	55.303	Esox_lucius
ENSPNAG00000013684	urb2	100	37.099	ENSFCAG00000007662	URB2	100	37.108	Felis_catus
ENSPNAG00000013684	urb2	100	38.516	ENSFALG00000003385	URB2	100	38.388	Ficedula_albicollis
ENSPNAG00000013684	urb2	100	36.276	ENSFDAG00000021079	URB2	100	36.346	Fukomys_damarensis
ENSPNAG00000013684	urb2	99	41.759	ENSFHEG00000010357	urb2	99	41.697	Fundulus_heteroclitus
ENSPNAG00000013684	urb2	99	42.948	ENSGMOG00000012459	urb2	100	43.323	Gadus_morhua
ENSPNAG00000013684	urb2	100	39.758	ENSGALG00000011101	URB2	100	39.758	Gallus_gallus
ENSPNAG00000013684	urb2	99	44.779	ENSGACG00000016179	urb2	99	44.779	Gasterosteus_aculeatus
ENSPNAG00000013684	urb2	100	41.698	ENSGAGG00000021879	URB2	100	41.698	Gopherus_agassizii
ENSPNAG00000013684	urb2	100	36.947	ENSGGOG00000025643	URB2	100	36.947	Gorilla_gorilla
ENSPNAG00000013684	urb2	99	56.098	ENSHBUG00000018469	urb2	96	56.098	Haplochromis_burtoni
ENSPNAG00000013684	urb2	97	36.048	ENSHGLG00000016561	URB2	99	36.048	Heterocephalus_glaber_female
ENSPNAG00000013684	urb2	100	36.174	ENSHGLG00100001838	URB2	100	36.174	Heterocephalus_glaber_male
ENSPNAG00000013684	urb2	99	66.952	ENSIPUG00000020315	urb2	99	66.952	Ictalurus_punctatus
ENSPNAG00000013684	urb2	100	36.323	ENSSTOG00000025323	URB2	100	36.323	Ictidomys_tridecemlineatus
ENSPNAG00000013684	urb2	100	36.287	ENSJJAG00000011998	Urb2	100	36.287	Jaculus_jaculus
ENSPNAG00000013684	urb2	99	41.056	ENSKMAG00000020129	urb2	99	41.236	Kryptolebias_marmoratus
ENSPNAG00000013684	urb2	100	42.122	ENSLACG00000002038	URB2	100	42.416	Latimeria_chalumnae
ENSPNAG00000013684	urb2	100	48.283	ENSLOCG00000015462	urb2	100	48.283	Lepisosteus_oculatus
ENSPNAG00000013684	urb2	99	36.669	ENSLAFG00000012484	URB2	100	36.669	Loxodonta_africana
ENSPNAG00000013684	urb2	100	36.846	ENSMFAG00000039905	URB2	100	36.774	Macaca_fascicularis
ENSPNAG00000013684	urb2	100	36.846	ENSMMUG00000009509	URB2	100	36.774	Macaca_mulatta
ENSPNAG00000013684	urb2	100	37.039	ENSMNEG00000038762	URB2	100	36.968	Macaca_nemestrina
ENSPNAG00000013684	urb2	100	37.039	ENSMLEG00000043252	URB2	100	37.123	Mandrillus_leucophaeus
ENSPNAG00000013684	urb2	99	42.612	ENSMAMG00000020365	urb2	99	42.671	Mastacembelus_armatus
ENSPNAG00000013684	urb2	99	56.364	ENSMZEG00005011027	urb2	96	56.364	Maylandia_zebra
ENSPNAG00000013684	urb2	93	37.157	ENSMGAG00000012073	URB2	99	37.294	Meleagris_gallopavo
ENSPNAG00000013684	urb2	95	54.225	ENSMAUG00000017980	Urb2	100	54.225	Mesocricetus_auratus
ENSPNAG00000013684	urb2	99	35.636	ENSMICG00000033302	URB2	99	35.636	Microcebus_murinus
ENSPNAG00000013684	urb2	100	36.381	ENSMOCG00000020369	Urb2	100	36.446	Microtus_ochrogaster
ENSPNAG00000013684	urb2	99	43.052	ENSMALG00000006529	urb2	99	43.052	Monopterus_albus
ENSPNAG00000013684	urb2	100	35.723	ENSMUSG00000031976	Urb2	100	35.783	Mus_musculus
ENSPNAG00000013684	urb2	100	37.039	ENSMPUG00000012438	URB2	100	37.039	Mustela_putorius_furo
ENSPNAG00000013684	urb2	100	36.300	ENSNGAG00000016524	Urb2	100	36.556	Nannospalax_galili
ENSPNAG00000013684	urb2	100	37.121	ENSNLEG00000014450	URB2	100	37.283	Nomascus_leucogenys
ENSPNAG00000013684	urb2	89	42.601	ENSMEUG00000016434	URB2	92	42.601	Notamacropus_eugenii
ENSPNAG00000013684	urb2	91	37.424	ENSOPRG00000009906	URB2	91	37.424	Ochotona_princeps
ENSPNAG00000013684	urb2	100	37.143	ENSODEG00000005593	URB2	100	37.273	Octodon_degus
ENSPNAG00000013684	urb2	99	45.142	ENSONIG00000017078	urb2	99	45.243	Oreochromis_niloticus
ENSPNAG00000013684	urb2	100	34.031	ENSOANG00000013732	URB2	100	34.031	Ornithorhynchus_anatinus
ENSPNAG00000013684	urb2	99	36.750	ENSOCUG00000010700	URB2	99	36.825	Oryctolagus_cuniculus
ENSPNAG00000013684	urb2	99	42.242	ENSORLG00000010915	urb2	99	42.242	Oryzias_latipes
ENSPNAG00000013684	urb2	99	42.441	ENSORLG00020003361	urb2	99	42.424	Oryzias_latipes_hni
ENSPNAG00000013684	urb2	99	41.945	ENSORLG00015001534	urb2	99	41.945	Oryzias_latipes_hsok
ENSPNAG00000013684	urb2	99	41.616	ENSOMEG00000010076	urb2	99	41.616	Oryzias_melastigma
ENSPNAG00000013684	urb2	99	35.838	ENSOGAG00000003021	URB2	99	35.967	Otolemur_garnettii
ENSPNAG00000013684	urb2	99	36.682	ENSOARG00000003102	URB2	99	36.682	Ovis_aries
ENSPNAG00000013684	urb2	100	36.707	ENSPPAG00000040629	URB2	100	36.707	Pan_paniscus
ENSPNAG00000013684	urb2	100	37.227	ENSPPRG00000012767	URB2	100	37.236	Panthera_pardus
ENSPNAG00000013684	urb2	97	51.515	ENSPTIG00000012577	URB2	100	51.515	Panthera_tigris_altaica
ENSPNAG00000013684	urb2	100	36.737	ENSPTRG00000002092	URB2	100	36.643	Pan_troglodytes
ENSPNAG00000013684	urb2	100	36.205	ENSPANG00000002245	URB2	100	36.264	Papio_anubis
ENSPNAG00000013684	urb2	100	51.295	ENSPKIG00000005787	urb2	100	51.425	Paramormyrops_kingsleyae
ENSPNAG00000013684	urb2	100	40.825	ENSPSIG00000002690	URB2	100	40.825	Pelodiscus_sinensis
ENSPNAG00000013684	urb2	96	35.594	ENSPEMG00000019551	Urb2	100	35.594	Peromyscus_maniculatus_bairdii
ENSPNAG00000013684	urb2	100	37.063	ENSPCIG00000030071	URB2	100	37.063	Phascolarctos_cinereus
ENSPNAG00000013684	urb2	99	42.320	ENSPFOG00000014330	urb2	99	42.357	Poecilia_formosa
ENSPNAG00000013684	urb2	99	41.454	ENSPLAG00000014654	urb2	99	41.491	Poecilia_latipinna
ENSPNAG00000013684	urb2	99	41.579	ENSPMEG00000012356	urb2	99	41.491	Poecilia_mexicana
ENSPNAG00000013684	urb2	99	41.460	ENSPREG00000010268	urb2	99	41.486	Poecilia_reticulata
ENSPNAG00000013684	urb2	99	36.510	ENSPPYG00000000123	URB2	99	36.673	Pongo_abelii
ENSPNAG00000013684	urb2	99	36.470	ENSPCOG00000023537	URB2	99	36.470	Propithecus_coquereli
ENSPNAG00000013684	urb2	100	34.777	ENSPVAG00000002108	URB2	100	34.777	Pteropus_vampyrus
ENSPNAG00000013684	urb2	89	43.126	ENSPNYG00000016840	urb2	94	43.336	Pundamilia_nyererei
ENSPNAG00000013684	urb2	100	35.962	ENSRNOG00000026853	Urb2	97	35.997	Rattus_norvegicus
ENSPNAG00000013684	urb2	100	36.856	ENSRBIG00000037937	URB2	100	37.018	Rhinopithecus_bieti
ENSPNAG00000013684	urb2	100	37.049	ENSRROG00000039854	URB2	100	37.211	Rhinopithecus_roxellana
ENSPNAG00000013684	urb2	100	36.592	ENSSBOG00000023055	URB2	100	36.592	Saimiri_boliviensis_boliviensis
ENSPNAG00000013684	urb2	100	36.546	ENSSHAG00000014735	URB2	100	36.464	Sarcophilus_harrisii
ENSPNAG00000013684	urb2	99	49.802	ENSSFOG00015015432	urb2	99	50.000	Scleropages_formosus
ENSPNAG00000013684	urb2	89	42.742	ENSSMAG00000004984	urb2	96	42.742	Scophthalmus_maximus
ENSPNAG00000013684	urb2	99	56.287	ENSSDUG00000000902	urb2	96	56.287	Seriola_dumerili
ENSPNAG00000013684	urb2	100	39.658	ENSSPUG00000018549	URB2	100	39.937	Sphenodon_punctatus
ENSPNAG00000013684	urb2	99	43.209	ENSSPAG00000013632	urb2	99	43.269	Stegastes_partitus
ENSPNAG00000013684	urb2	99	36.781	ENSSSCG00000010186	URB2	99	36.781	Sus_scrofa
ENSPNAG00000013684	urb2	100	38.867	ENSTGUG00000009990	URB2	100	38.957	Taeniopygia_guttata
ENSPNAG00000013684	urb2	99	40.024	ENSTRUG00000008173	urb2	99	40.096	Takifugu_rubripes
ENSPNAG00000013684	urb2	99	43.912	ENSTNIG00000017689	urb2	99	44.286	Tetraodon_nigroviridis
ENSPNAG00000013684	urb2	99	33.873	ENSTTRG00000014864	URB2	99	33.873	Tursiops_truncatus
ENSPNAG00000013684	urb2	99	36.992	ENSUAMG00000015022	URB2	99	36.992	Ursus_americanus
ENSPNAG00000013684	urb2	99	36.951	ENSUMAG00000004728	URB2	99	36.951	Ursus_maritimus
ENSPNAG00000013684	urb2	51	56.738	ENSVPAG00000001750	-	51	56.738	Vicugna_pacos
ENSPNAG00000013684	urb2	100	36.951	ENSVVUG00000006747	URB2	100	36.951	Vulpes_vulpes
ENSPNAG00000013684	urb2	100	36.020	ENSXETG00000023331	urb2	100	36.020	Xenopus_tropicalis
ENSPNAG00000013684	urb2	99	41.187	ENSXMAG00000015059	urb2	99	41.228	Xiphophorus_maculatus