EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000013806 (Gene tree)
Gene ID: 108436954
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 9834 bases
Position: chrKV575507.1:1016081-1025914
Accession: 108436954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000028199	PseudoU_synth_2	PF00849.22	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000000575	-	1352	XM_017713727	ENSPNAP00000028199	295 (aa)	XP_017569216	UPI0008146B6E

Gene Model

Click here to download ENSPNAG00000013806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000013806's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000013806	rpusd1	87	61.628	ENSG00000007376	RPUSD1	100	66.667	Homo_sapiens
ENSPNAG00000013806	rpusd1	99	65.789	ENSAPOG00000022221	rpusd1	99	66.007	Acanthochromis_polyacanthus
ENSPNAG00000013806	rpusd1	99	59.459	ENSAMEG00000007461	RPUSD1	98	59.459	Ailuropoda_melanoleuca
ENSPNAG00000013806	rpusd1	99	65.584	ENSACIG00000015863	rpusd1	99	66.124	Amphilophus_citrinellus
ENSPNAG00000013806	rpusd1	99	65.147	ENSAOCG00000021975	rpusd1	96	65.147	Amphiprion_ocellaris
ENSPNAG00000013806	rpusd1	99	65.472	ENSAPEG00000001316	rpusd1	96	65.472	Amphiprion_percula
ENSPNAG00000013806	rpusd1	99	64.052	ENSATEG00000002984	rpusd1	99	64.935	Anabas_testudineus
ENSPNAG00000013806	rpusd1	77	57.983	ENSAPLG00000012316	RPUSD1	98	57.983	Anas_platyrhynchos
ENSPNAG00000013806	rpusd1	99	60.943	ENSACAG00000008953	RPUSD1	99	60.943	Anolis_carolinensis
ENSPNAG00000013806	rpusd1	87	62.403	ENSANAG00000024709	RPUSD1	98	55.882	Aotus_nancymaae
ENSPNAG00000013806	rpusd1	99	64.839	ENSACLG00000013692	rpusd1	99	65.909	Astatotilapia_calliptera
ENSPNAG00000013806	rpusd1	100	78.983	ENSAMXG00000019802	rpusd1	100	78.983	Astyanax_mexicanus
ENSPNAG00000013806	rpusd1	100	59.344	ENSBTAG00000000179	RPUSD1	98	60.265	Bos_taurus
ENSPNAG00000013806	rpusd1	87	62.016	ENSCJAG00000012253	RPUSD1	98	55.556	Callithrix_jacchus
ENSPNAG00000013806	rpusd1	100	58.863	ENSCAFG00000019614	RPUSD1	99	59.532	Canis_familiaris
ENSPNAG00000013806	rpusd1	100	58.863	ENSCAFG00020008891	RPUSD1	99	59.532	Canis_lupus_dingo
ENSPNAG00000013806	rpusd1	100	59.672	ENSCHIG00000012872	RPUSD1	98	60.596	Capra_hircus
ENSPNAG00000013806	rpusd1	100	57.807	ENSTSYG00000036934	RPUSD1	99	57.807	Carlito_syrichta
ENSPNAG00000013806	rpusd1	100	57.096	ENSCAPG00000014219	RPUSD1	99	57.096	Cavia_aperea
ENSPNAG00000013806	rpusd1	100	57.096	ENSCPOG00000034604	RPUSD1	99	57.096	Cavia_porcellus
ENSPNAG00000013806	rpusd1	87	62.791	ENSCCAG00000034385	RPUSD1	98	56.209	Cebus_capucinus
ENSPNAG00000013806	rpusd1	87	62.403	ENSCATG00000042983	RPUSD1	98	55.882	Cercocebus_atys
ENSPNAG00000013806	rpusd1	100	56.766	ENSCLAG00000013966	RPUSD1	99	57.096	Chinchilla_lanigera
ENSPNAG00000013806	rpusd1	87	62.403	ENSCSAG00000012121	RPUSD1	98	56.209	Chlorocebus_sabaeus
ENSPNAG00000013806	rpusd1	99	59.603	ENSCPBG00000021101	RPUSD1	99	59.603	Chrysemys_picta_bellii
ENSPNAG00000013806	rpusd1	87	62.403	ENSCANG00000028576	RPUSD1	92	62.403	Colobus_angolensis_palliatus
ENSPNAG00000013806	rpusd1	100	58.333	ENSCGRG00001014253	Rpusd1	99	58.333	Cricetulus_griseus_chok1gshd
ENSPNAG00000013806	rpusd1	100	58.333	ENSCGRG00000017995	Rpusd1	99	58.333	Cricetulus_griseus_crigri
ENSPNAG00000013806	rpusd1	100	66.780	ENSCSEG00000018512	rpusd1	100	66.780	Cynoglossus_semilaevis
ENSPNAG00000013806	rpusd1	99	66.997	ENSCVAG00000022746	rpusd1	99	66.997	Cyprinodon_variegatus
ENSPNAG00000013806	rpusd1	100	68.581	ENSDARG00000060192	rpusd1	100	68.581	Danio_rerio
ENSPNAG00000013806	rpusd1	100	57.377	ENSDNOG00000003721	RPUSD1	98	57.947	Dasypus_novemcinctus
ENSPNAG00000013806	rpusd1	100	58.000	ENSDORG00000026656	Rpusd1	99	58.333	Dipodomys_ordii
ENSPNAG00000013806	rpusd1	97	48.366	ENSEBUG00000008767	rpusd1	92	48.366	Eptatretus_burgeri
ENSPNAG00000013806	rpusd1	100	56.869	ENSEASG00005018421	RPUSD1	75	56.869	Equus_asinus_asinus
ENSPNAG00000013806	rpusd1	100	62.745	ENSELUG00000014307	rpusd1	89	63.399	Esox_lucius
ENSPNAG00000013806	rpusd1	100	59.197	ENSFCAG00000010359	RPUSD1	99	59.197	Felis_catus
ENSPNAG00000013806	rpusd1	100	62.333	ENSFALG00000003211	RPUSD1	100	62.333	Ficedula_albicollis
ENSPNAG00000013806	rpusd1	100	57.426	ENSFDAG00000013398	RPUSD1	99	57.426	Fukomys_damarensis
ENSPNAG00000013806	rpusd1	99	66.118	ENSFHEG00000004736	rpusd1	99	67.105	Fundulus_heteroclitus
ENSPNAG00000013806	rpusd1	99	63.245	ENSGMOG00000010756	rpusd1	98	65.017	Gadus_morhua
ENSPNAG00000013806	rpusd1	100	60.396	ENSGALG00000005315	RPUSD1	100	60.396	Gallus_gallus
ENSPNAG00000013806	rpusd1	99	68.106	ENSGAFG00000009886	rpusd1	99	68.106	Gambusia_affinis
ENSPNAG00000013806	rpusd1	99	65.132	ENSGACG00000014276	rpusd1	98	66.230	Gasterosteus_aculeatus
ENSPNAG00000013806	rpusd1	99	58.940	ENSGAGG00000004181	RPUSD1	99	58.940	Gopherus_agassizii
ENSPNAG00000013806	rpusd1	87	62.016	ENSGGOG00000013997	RPUSD1	99	55.016	Gorilla_gorilla
ENSPNAG00000013806	rpusd1	99	64.839	ENSHBUG00000023728	rpusd1	99	65.909	Haplochromis_burtoni
ENSPNAG00000013806	rpusd1	100	56.766	ENSHGLG00000002595	RPUSD1	99	57.096	Heterocephalus_glaber_female
ENSPNAG00000013806	rpusd1	100	56.766	ENSHGLG00100014303	RPUSD1	99	57.096	Heterocephalus_glaber_male
ENSPNAG00000013806	rpusd1	99	64.041	ENSHCOG00000002390	rpusd1	99	64.041	Hippocampus_comes
ENSPNAG00000013806	rpusd1	99	68.106	ENSIPUG00000001570	rpusd1	99	68.439	Ictalurus_punctatus
ENSPNAG00000013806	rpusd1	100	57.756	ENSSTOG00000004276	RPUSD1	99	57.756	Ictidomys_tridecemlineatus
ENSPNAG00000013806	rpusd1	100	57.947	ENSJJAG00000015696	Rpusd1	99	57.947	Jaculus_jaculus
ENSPNAG00000013806	rpusd1	99	66.779	ENSKMAG00000017287	rpusd1	98	67.114	Kryptolebias_marmoratus
ENSPNAG00000013806	rpusd1	99	63.518	ENSLBEG00000022502	rpusd1	99	64.610	Labrus_bergylta
ENSPNAG00000013806	rpusd1	99	63.518	ENSLBEG00000013354	RPUSD1	99	64.610	Labrus_bergylta
ENSPNAG00000013806	rpusd1	100	59.136	ENSLACG00000008869	RPUSD1	99	59.136	Latimeria_chalumnae
ENSPNAG00000013806	rpusd1	73	75.814	ENSLOCG00000005682	rpusd1	99	75.814	Lepisosteus_oculatus
ENSPNAG00000013806	rpusd1	100	58.667	ENSLAFG00000002115	RPUSD1	99	58.667	Loxodonta_africana
ENSPNAG00000013806	rpusd1	87	62.403	ENSMFAG00000003961	RPUSD1	98	55.882	Macaca_fascicularis
ENSPNAG00000013806	rpusd1	87	62.403	ENSMMUG00000000842	RPUSD1	98	55.882	Macaca_mulatta
ENSPNAG00000013806	rpusd1	87	62.403	ENSMNEG00000042712	RPUSD1	98	55.882	Macaca_nemestrina
ENSPNAG00000013806	rpusd1	87	62.403	ENSMLEG00000030591	RPUSD1	98	55.882	Mandrillus_leucophaeus
ENSPNAG00000013806	rpusd1	99	65.472	ENSMAMG00000004735	rpusd1	99	65.909	Mastacembelus_armatus
ENSPNAG00000013806	rpusd1	99	64.839	ENSMZEG00005003214	rpusd1	99	65.909	Maylandia_zebra
ENSPNAG00000013806	rpusd1	97	61.695	ENSMGAG00000005447	RPUSD1	99	61.695	Meleagris_gallopavo
ENSPNAG00000013806	rpusd1	87	56.589	ENSMAUG00000019998	Rpusd1	98	56.589	Mesocricetus_auratus
ENSPNAG00000013806	rpusd1	99	57.190	ENSMICG00000017561	RPUSD1	98	58.140	Microcebus_murinus
ENSPNAG00000013806	rpusd1	100	58.086	ENSMOCG00000014082	Rpusd1	99	58.086	Microtus_ochrogaster
ENSPNAG00000013806	rpusd1	100	65.763	ENSMMOG00000012569	rpusd1	100	66.102	Mola_mola
ENSPNAG00000013806	rpusd1	100	60.526	ENSMODG00000016882	RPUSD1	99	60.526	Monodelphis_domestica
ENSPNAG00000013806	rpusd1	99	64.169	ENSMALG00000017818	rpusd1	99	64.610	Monopterus_albus
ENSPNAG00000013806	rpusd1	100	58.416	MGP_CAROLIEiJ_G0021244	Rpusd1	99	58.416	Mus_caroli
ENSPNAG00000013806	rpusd1	100	58.746	ENSMUSG00000041199	Rpusd1	99	58.416	Mus_musculus
ENSPNAG00000013806	rpusd1	100	58.033	MGP_PahariEiJ_G0023562	Rpusd1	99	58.033	Mus_pahari
ENSPNAG00000013806	rpusd1	100	58.746	MGP_SPRETEiJ_G0022155	Rpusd1	99	58.416	Mus_spretus
ENSPNAG00000013806	rpusd1	100	57.525	ENSMPUG00000015897	RPUSD1	99	58.528	Mustela_putorius_furo
ENSPNAG00000013806	rpusd1	100	57.143	ENSMLUG00000001089	RPUSD1	98	57.705	Myotis_lucifugus
ENSPNAG00000013806	rpusd1	100	57.756	ENSNGAG00000003595	Rpusd1	98	58.667	Nannospalax_galili
ENSPNAG00000013806	rpusd1	99	64.839	ENSNBRG00000006457	rpusd1	99	68.136	Neolamprologus_brichardi
ENSPNAG00000013806	rpusd1	53	47.929	ENSNLEG00000008424	-	97	47.929	Nomascus_leucogenys
ENSPNAG00000013806	rpusd1	100	61.074	ENSMEUG00000016049	RPUSD1	99	61.074	Notamacropus_eugenii
ENSPNAG00000013806	rpusd1	100	51.171	ENSOPRG00000008340	RPUSD1	99	51.171	Ochotona_princeps
ENSPNAG00000013806	rpusd1	100	56.766	ENSODEG00000016945	RPUSD1	99	56.766	Octodon_degus
ENSPNAG00000013806	rpusd1	99	65.472	ENSONIG00000015672	rpusd1	99	67.213	Oreochromis_niloticus
ENSPNAG00000013806	rpusd1	99	67.667	ENSORLG00000013009	rpusd1	99	67.667	Oryzias_latipes
ENSPNAG00000013806	rpusd1	99	68.000	ENSORLG00020010382	rpusd1	99	68.000	Oryzias_latipes_hni
ENSPNAG00000013806	rpusd1	99	67.000	ENSORLG00015021354	rpusd1	99	67.000	Oryzias_latipes_hsok
ENSPNAG00000013806	rpusd1	99	65.217	ENSOMEG00000021426	rpusd1	99	65.217	Oryzias_melastigma
ENSPNAG00000013806	rpusd1	100	57.282	ENSOGAG00000003795	RPUSD1	98	57.843	Otolemur_garnettii
ENSPNAG00000013806	rpusd1	100	59.344	ENSOARG00000014254	RPUSD1	98	60.596	Ovis_aries
ENSPNAG00000013806	rpusd1	87	61.628	ENSPPAG00000034797	RPUSD1	98	55.229	Pan_paniscus
ENSPNAG00000013806	rpusd1	100	58.863	ENSPPRG00000012389	RPUSD1	99	58.863	Panthera_pardus
ENSPNAG00000013806	rpusd1	100	58.863	ENSPTIG00000008545	RPUSD1	91	58.863	Panthera_tigris_altaica
ENSPNAG00000013806	rpusd1	87	61.628	ENSPTRG00000007565	RPUSD1	98	55.229	Pan_troglodytes
ENSPNAG00000013806	rpusd1	87	62.016	ENSPANG00000024401	RPUSD1	98	55.556	Papio_anubis
ENSPNAG00000013806	rpusd1	100	67.219	ENSPKIG00000018890	rpusd1	91	67.219	Paramormyrops_kingsleyae
ENSPNAG00000013806	rpusd1	100	60.586	ENSPSIG00000013945	RPUSD1	100	60.586	Pelodiscus_sinensis
ENSPNAG00000013806	rpusd1	99	65.986	ENSPMGG00000014950	rpusd1	98	65.986	Periophthalmus_magnuspinnatus
ENSPNAG00000013806	rpusd1	100	57.756	ENSPEMG00000000497	Rpusd1	99	57.756	Peromyscus_maniculatus_bairdii
ENSPNAG00000013806	rpusd1	100	55.738	ENSPMAG00000001563	rpusd1	100	56.066	Petromyzon_marinus
ENSPNAG00000013806	rpusd1	100	62.000	ENSPCIG00000021216	-	93	62.000	Phascolarctos_cinereus
ENSPNAG00000013806	rpusd1	99	68.000	ENSPFOG00000007946	rpusd1	99	68.000	Poecilia_formosa
ENSPNAG00000013806	rpusd1	99	68.000	ENSPLAG00000011925	rpusd1	99	68.000	Poecilia_latipinna
ENSPNAG00000013806	rpusd1	99	68.000	ENSPMEG00000002910	rpusd1	99	68.000	Poecilia_mexicana
ENSPNAG00000013806	rpusd1	99	68.771	ENSPREG00000019851	rpusd1	99	68.771	Poecilia_reticulata
ENSPNAG00000013806	rpusd1	100	46.512	ENSPCAG00000002258	RPUSD1	99	46.512	Procavia_capensis
ENSPNAG00000013806	rpusd1	100	56.311	ENSPCOG00000022582	RPUSD1	98	56.536	Propithecus_coquereli
ENSPNAG00000013806	rpusd1	100	55.016	ENSPVAG00000013104	RPUSD1	98	55.556	Pteropus_vampyrus
ENSPNAG00000013806	rpusd1	99	65.986	ENSPNYG00000024076	rpusd1	99	68.027	Pundamilia_nyererei
ENSPNAG00000013806	rpusd1	100	58.416	ENSRNOG00000023639	Rpusd1	99	58.416	Rattus_norvegicus
ENSPNAG00000013806	rpusd1	87	62.791	ENSRBIG00000030238	RPUSD1	98	56.536	Rhinopithecus_bieti
ENSPNAG00000013806	rpusd1	87	62.791	ENSRROG00000036663	RPUSD1	98	56.536	Rhinopithecus_roxellana
ENSPNAG00000013806	rpusd1	100	57.525	ENSSBOG00000033063	RPUSD1	98	58.108	Saimiri_boliviensis_boliviensis
ENSPNAG00000013806	rpusd1	100	61.667	ENSSHAG00000013500	RPUSD1	99	61.667	Sarcophilus_harrisii
ENSPNAG00000013806	rpusd1	99	68.896	ENSSFOG00015014394	rpusd1	99	68.896	Scleropages_formosus
ENSPNAG00000013806	rpusd1	99	64.052	ENSSMAG00000008045	rpusd1	92	65.472	Scophthalmus_maximus
ENSPNAG00000013806	rpusd1	86	73.228	ENSSDUG00000001829	rpusd1	96	66.667	Seriola_dumerili
ENSPNAG00000013806	rpusd1	86	73.228	ENSSLDG00000020853	rpusd1	96	66.667	Seriola_lalandi_dorsalis
ENSPNAG00000013806	rpusd1	56	71.856	ENSSARG00000011187	-	100	71.856	Sorex_araneus
ENSPNAG00000013806	rpusd1	62	55.789	ENSSPUG00000005119	-	100	55.789	Sphenodon_punctatus
ENSPNAG00000013806	rpusd1	99	66.775	ENSSPAG00000012708	rpusd1	99	67.532	Stegastes_partitus
ENSPNAG00000013806	rpusd1	100	57.282	ENSSSCG00000008000	RPUSD1	98	63.922	Sus_scrofa
ENSPNAG00000013806	rpusd1	85	68.254	ENSTGUG00000015375	RPUSD1	99	68.254	Taeniopygia_guttata
ENSPNAG00000013806	rpusd1	99	64.052	ENSTRUG00000003041	rpusd1	98	65.584	Takifugu_rubripes
ENSPNAG00000013806	rpusd1	99	63.230	ENSTNIG00000002660	rpusd1	99	63.230	Tetraodon_nigroviridis
ENSPNAG00000013806	rpusd1	100	58.576	ENSTTRG00000010167	RPUSD1	98	59.804	Tursiops_truncatus
ENSPNAG00000013806	rpusd1	100	58.528	ENSUAMG00000012736	RPUSD1	99	59.197	Ursus_americanus
ENSPNAG00000013806	rpusd1	100	59.197	ENSUMAG00000021174	RPUSD1	99	59.532	Ursus_maritimus
ENSPNAG00000013806	rpusd1	100	58.194	ENSVVUG00000012357	RPUSD1	99	58.194	Vulpes_vulpes
ENSPNAG00000013806	rpusd1	100	61.204	ENSXETG00000007184	rpusd1	99	61.204	Xenopus_tropicalis
ENSPNAG00000013806	rpusd1	99	67.774	ENSXCOG00000017930	rpusd1	99	67.774	Xiphophorus_couchianus
ENSPNAG00000013806	rpusd1	99	68.771	ENSXMAG00000024084	rpusd1	99	68.771	Xiphophorus_maculatus