EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000014601 (Gene tree)
Gene ID: 108431323
Gene Symbol: srsf1b
Alias: sfrs1|sfrs1b|wu:fb80g05|zgc:111894|zgc:65898|zgc:76897
Full Name: serine/arginine-rich splicing factor 1B
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 3361 bases
Position: chrKV575386.1:1510971-1514331
Accession: 108431323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000009032	RRM_1	PF00076.22	4.3e-33	1	2
ENSPNAP00000009032	RRM_1	PF00076.22	4.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000015263	-	1026	XM_017704389	ENSPNAP00000009032	241 (aa)	XP_017559878	UPI0008143204

Gene Model

Click here to download ENSPNAG00000014601's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000014601's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000014601	srsf1b	64	47.024	ENSPNAG00000011262	srsf5b	82	45.238
ENSPNAG00000014601	srsf1b	66	45.143	ENSPNAG00000021333	srsf5a	60	43.429
ENSPNAG00000014601	srsf1b	72	72.989	ENSPNAG00000003588	srsf9	72	72.414
ENSPNAG00000014601	srsf1b	94	91.342	ENSPNAG00000022241	srsf1a	78	94.764

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000014601	srsf1b	100	94.355	ENSG00000136450	SRSF1	100	98.462	Homo_sapiens
ENSPNAG00000014601	srsf1b	80	91.146	ENSAPOG00000008542	-	80	89.062	Acanthochromis_polyacanthus
ENSPNAG00000014601	srsf1b	78	91.099	ENSAPOG00000002748	-	78	91.099	Acanthochromis_polyacanthus
ENSPNAG00000014601	srsf1b	80	92.188	ENSAMEG00000002635	SRSF1	79	92.708	Ailuropoda_melanoleuca
ENSPNAG00000014601	srsf1b	78	91.579	ENSACIG00000008091	srsf1a	83	92.105	Amphilophus_citrinellus
ENSPNAG00000014601	srsf1b	78	91.623	ENSAOCG00000010671	-	83	91.623	Amphiprion_ocellaris
ENSPNAG00000014601	srsf1b	80	87.192	ENSAOCG00000000337	-	82	87.192	Amphiprion_ocellaris
ENSPNAG00000014601	srsf1b	80	87.192	ENSAPEG00000023352	-	81	87.192	Amphiprion_percula
ENSPNAG00000014601	srsf1b	78	91.623	ENSAPEG00000009915	-	83	91.623	Amphiprion_percula
ENSPNAG00000014601	srsf1b	80	88.660	ENSATEG00000021567	-	81	89.691	Anabas_testudineus
ENSPNAG00000014601	srsf1b	78	91.623	ENSATEG00000022403	-	77	91.623	Anabas_testudineus
ENSPNAG00000014601	srsf1b	100	95.161	ENSACAG00000005542	-	100	95.161	Anolis_carolinensis
ENSPNAG00000014601	srsf1b	81	70.256	ENSANAG00000025417	-	75	70.312	Aotus_nancymaae
ENSPNAG00000014601	srsf1b	99	94.309	ENSANAG00000020583	-	99	97.222	Aotus_nancymaae
ENSPNAG00000014601	srsf1b	73	86.275	ENSAMXG00000024373	-	94	86.275	Astyanax_mexicanus
ENSPNAG00000014601	srsf1b	94	86.611	ENSAMXG00000035996	srsf1a	79	90.452	Astyanax_mexicanus
ENSPNAG00000014601	srsf1b	100	94.355	ENSBTAG00000014766	SRSF1	100	94.355	Bos_taurus
ENSPNAG00000014601	srsf1b	99	94.309	ENSCJAG00000041713	-	99	97.222	Callithrix_jacchus
ENSPNAG00000014601	srsf1b	79	83.673	ENSCJAG00000008111	-	88	84.772	Callithrix_jacchus
ENSPNAG00000014601	srsf1b	99	94.309	ENSCAFG00000017430	SRSF1	97	94.309	Canis_familiaris
ENSPNAG00000014601	srsf1b	99	94.309	ENSCAFG00020025632	-	97	94.309	Canis_lupus_dingo
ENSPNAG00000014601	srsf1b	100	94.355	ENSCHIG00000010787	SRSF1	100	94.355	Capra_hircus
ENSPNAG00000014601	srsf1b	99	94.309	ENSTSYG00000013899	-	99	97.222	Carlito_syrichta
ENSPNAG00000014601	srsf1b	100	94.355	ENSCPOG00000032681	-	100	94.355	Cavia_porcellus
ENSPNAG00000014601	srsf1b	100	94.355	ENSCCAG00000029484	-	99	97.222	Cebus_capucinus
ENSPNAG00000014601	srsf1b	99	94.309	ENSCATG00000042294	-	99	97.222	Cercocebus_atys
ENSPNAG00000014601	srsf1b	100	94.355	ENSCLAG00000014707	-	100	94.355	Chinchilla_lanigera
ENSPNAG00000014601	srsf1b	100	87.500	ENSCSAG00000005642	-	78	91.878	Chlorocebus_sabaeus
ENSPNAG00000014601	srsf1b	100	94.355	ENSCHOG00000001899	SRSF1	100	94.355	Choloepus_hoffmanni
ENSPNAG00000014601	srsf1b	100	95.565	ENSCPBG00000009851	-	100	95.565	Chrysemys_picta_bellii
ENSPNAG00000014601	srsf1b	99	94.309	ENSCANG00000029726	-	99	97.222	Colobus_angolensis_palliatus
ENSPNAG00000014601	srsf1b	99	94.309	ENSCGRG00001000670	Srsf1	97	94.309	Cricetulus_griseus_chok1gshd
ENSPNAG00000014601	srsf1b	100	94.355	ENSCGRG00000005590	Srsf1	100	94.355	Cricetulus_griseus_crigri
ENSPNAG00000014601	srsf1b	79	81.132	ENSCSEG00000009973	-	81	79.717	Cynoglossus_semilaevis
ENSPNAG00000014601	srsf1b	78	93.085	ENSCSEG00000014272	-	81	90.426	Cynoglossus_semilaevis
ENSPNAG00000014601	srsf1b	78	91.623	ENSCVAG00000018617	-	78	91.623	Cyprinodon_variegatus
ENSPNAG00000014601	srsf1b	78	86.667	ENSCVAG00000005458	-	91	86.885	Cyprinodon_variegatus
ENSPNAG00000014601	srsf1b	78	86.765	ENSDARG00000057691	srsf1a	99	90.052	Danio_rerio
ENSPNAG00000014601	srsf1b	99	97.119	ENSDARG00000017843	srsf1b	99	97.119	Danio_rerio
ENSPNAG00000014601	srsf1b	99	94.309	ENSDNOG00000011737	-	97	94.309	Dasypus_novemcinctus
ENSPNAG00000014601	srsf1b	100	94.355	ENSDORG00000015082	Srsf1	100	94.355	Dipodomys_ordii
ENSPNAG00000014601	srsf1b	74	90.761	ENSETEG00000005349	-	63	91.848	Echinops_telfairi
ENSPNAG00000014601	srsf1b	99	94.309	ENSEASG00005002922	-	97	94.309	Equus_asinus_asinus
ENSPNAG00000014601	srsf1b	100	94.355	ENSECAG00000016654	SRSF1	100	94.355	Equus_caballus
ENSPNAG00000014601	srsf1b	74	91.848	ENSEEUG00000009255	-	63	93.478	Erinaceus_europaeus
ENSPNAG00000014601	srsf1b	78	93.264	ENSELUG00000021646	srsf1a	77	93.264	Esox_lucius
ENSPNAG00000014601	srsf1b	99	94.309	ENSFCAG00000002250	-	97	94.309	Felis_catus
ENSPNAG00000014601	srsf1b	99	80.894	ENSFALG00000005062	-	97	80.894	Ficedula_albicollis
ENSPNAG00000014601	srsf1b	100	94.355	ENSFDAG00000010646	-	100	94.355	Fukomys_damarensis
ENSPNAG00000014601	srsf1b	78	91.623	ENSFHEG00000003174	srsf1a	83	91.623	Fundulus_heteroclitus
ENSPNAG00000014601	srsf1b	92	89.593	ENSGMOG00000014787	-	80	90.426	Gadus_morhua
ENSPNAG00000014601	srsf1b	100	95.565	ENSGALG00000005525	SRSF1	100	95.565	Gallus_gallus
ENSPNAG00000014601	srsf1b	80	88.542	ENSGACG00000020621	srsf1b	80	86.979	Gasterosteus_aculeatus
ENSPNAG00000014601	srsf1b	99	95.528	ENSGAGG00000022965	-	97	95.528	Gopherus_agassizii
ENSPNAG00000014601	srsf1b	99	94.309	ENSGGOG00000004386	SRSF1	99	97.222	Gorilla_gorilla
ENSPNAG00000014601	srsf1b	78	91.579	ENSHBUG00000016788	srsf1a	80	92.105	Haplochromis_burtoni
ENSPNAG00000014601	srsf1b	86	93.953	ENSHGLG00000000669	-	100	93.953	Heterocephalus_glaber_female
ENSPNAG00000014601	srsf1b	86	93.953	ENSHGLG00000000600	-	100	93.953	Heterocephalus_glaber_female
ENSPNAG00000014601	srsf1b	100	94.355	ENSHGLG00100016906	-	100	94.355	Heterocephalus_glaber_male
ENSPNAG00000014601	srsf1b	78	84.264	ENSHCOG00000018918	srsf1a	77	85.787	Hippocampus_comes
ENSPNAG00000014601	srsf1b	100	96.735	ENSIPUG00000008750	srsf1b	100	96.735	Ictalurus_punctatus
ENSPNAG00000014601	srsf1b	94	85.774	ENSIPUG00000017039	srsf1a	79	90.955	Ictalurus_punctatus
ENSPNAG00000014601	srsf1b	100	94.355	ENSSTOG00000000243	-	100	94.355	Ictidomys_tridecemlineatus
ENSPNAG00000014601	srsf1b	100	94.355	ENSJJAG00000000102	-	100	94.355	Jaculus_jaculus
ENSPNAG00000014601	srsf1b	51	87.302	ENSJJAG00000014464	-	95	89.683	Jaculus_jaculus
ENSPNAG00000014601	srsf1b	78	91.667	ENSKMAG00000019232	srsf1a	78	91.667	Kryptolebias_marmoratus
ENSPNAG00000014601	srsf1b	80	83.000	ENSLBEG00000015294	-	80	83.500	Labrus_bergylta
ENSPNAG00000014601	srsf1b	78	92.670	ENSLBEG00000020864	-	83	92.670	Labrus_bergylta
ENSPNAG00000014601	srsf1b	78	91.710	ENSLACG00000014160	srsf1a	73	91.710	Latimeria_chalumnae
ENSPNAG00000014601	srsf1b	80	92.857	ENSLOCG00000005994	srsf1a	100	95.951	Lepisosteus_oculatus
ENSPNAG00000014601	srsf1b	100	94.355	ENSLAFG00000025743	SRSF1	100	94.355	Loxodonta_africana
ENSPNAG00000014601	srsf1b	100	94.355	ENSMFAG00000040003	-	99	97.222	Macaca_fascicularis
ENSPNAG00000014601	srsf1b	99	94.309	ENSMMUG00000004725	SRSF1	99	97.222	Macaca_mulatta
ENSPNAG00000014601	srsf1b	100	85.887	ENSMMUG00000003260	-	95	88.776	Macaca_mulatta
ENSPNAG00000014601	srsf1b	99	94.309	ENSMNEG00000027680	-	99	97.222	Macaca_nemestrina
ENSPNAG00000014601	srsf1b	100	85.484	ENSMNEG00000015983	-	78	89.848	Macaca_nemestrina
ENSPNAG00000014601	srsf1b	100	88.066	ENSMLEG00000015243	-	77	90.625	Mandrillus_leucophaeus
ENSPNAG00000014601	srsf1b	100	94.355	ENSMLEG00000040509	SRSF1	100	94.355	Mandrillus_leucophaeus
ENSPNAG00000014601	srsf1b	78	91.623	ENSMAMG00000018454	-	78	91.623	Mastacembelus_armatus
ENSPNAG00000014601	srsf1b	80	90.625	ENSMAMG00000019687	-	80	89.062	Mastacembelus_armatus
ENSPNAG00000014601	srsf1b	80	92.347	ENSMAMG00000019691	-	81	92.347	Mastacembelus_armatus
ENSPNAG00000014601	srsf1b	100	94.355	ENSMAUG00000021845	Srsf1	100	94.355	Mesocricetus_auratus
ENSPNAG00000014601	srsf1b	99	94.309	ENSMICG00000013639	-	99	97.222	Microcebus_murinus
ENSPNAG00000014601	srsf1b	100	94.355	ENSMOCG00000001996	Srsf1	100	94.355	Microtus_ochrogaster
ENSPNAG00000014601	srsf1b	78	92.670	ENSMMOG00000014354	srsf1a	83	92.147	Mola_mola
ENSPNAG00000014601	srsf1b	74	94.054	ENSMODG00000014781	-	63	94.054	Monodelphis_domestica
ENSPNAG00000014601	srsf1b	78	91.623	ENSMALG00000017129	-	75	91.623	Monopterus_albus
ENSPNAG00000014601	srsf1b	83	79.397	ENSMALG00000007763	-	79	80.729	Monopterus_albus
ENSPNAG00000014601	srsf1b	100	94.355	MGP_CAROLIEiJ_G0016943	Srsf1	100	94.355	Mus_caroli
ENSPNAG00000014601	srsf1b	100	94.355	ENSMUSG00000018379	Srsf1	100	94.355	Mus_musculus
ENSPNAG00000014601	srsf1b	100	94.355	MGP_PahariEiJ_G0018074	Srsf1	100	94.355	Mus_pahari
ENSPNAG00000014601	srsf1b	100	94.355	MGP_SPRETEiJ_G0017790	Srsf1	100	94.355	Mus_spretus
ENSPNAG00000014601	srsf1b	100	94.355	ENSMPUG00000015369	SRSF1	100	94.355	Mustela_putorius_furo
ENSPNAG00000014601	srsf1b	82	89.394	ENSMLUG00000023995	-	79	88.021	Myotis_lucifugus
ENSPNAG00000014601	srsf1b	100	94.355	ENSMLUG00000011040	SRSF1	100	94.355	Myotis_lucifugus
ENSPNAG00000014601	srsf1b	100	94.355	ENSNGAG00000011395	Srsf1	100	94.355	Nannospalax_galili
ENSPNAG00000014601	srsf1b	100	81.224	ENSNBRG00000008041	srsf1b	80	82.292	Neolamprologus_brichardi
ENSPNAG00000014601	srsf1b	99	94.309	ENSNLEG00000008088	-	99	97.222	Nomascus_leucogenys
ENSPNAG00000014601	srsf1b	50	89.764	ENSMEUG00000002783	-	100	87.402	Notamacropus_eugenii
ENSPNAG00000014601	srsf1b	53	85.606	ENSOPRG00000001234	-	72	90.152	Ochotona_princeps
ENSPNAG00000014601	srsf1b	100	93.952	ENSODEG00000011481	-	100	93.952	Octodon_degus
ENSPNAG00000014601	srsf1b	95	90.171	ENSONIG00000004860	-	81	92.347	Oreochromis_niloticus
ENSPNAG00000014601	srsf1b	78	91.579	ENSONIG00000013160	-	77	92.105	Oreochromis_niloticus
ENSPNAG00000014601	srsf1b	100	71.660	ENSOCUG00000010894	-	77	75.789	Oryctolagus_cuniculus
ENSPNAG00000014601	srsf1b	78	91.623	ENSORLG00000004580	srsf1a	78	91.623	Oryzias_latipes
ENSPNAG00000014601	srsf1b	78	91.623	ENSORLG00020009456	srsf1a	83	91.623	Oryzias_latipes_hni
ENSPNAG00000014601	srsf1b	78	91.623	ENSORLG00015014384	srsf1a	83	91.623	Oryzias_latipes_hsok
ENSPNAG00000014601	srsf1b	71	89.655	ENSOMEG00000004106	srsf1a	71	89.655	Oryzias_melastigma
ENSPNAG00000014601	srsf1b	100	94.355	ENSOGAG00000025950	-	100	94.355	Otolemur_garnettii
ENSPNAG00000014601	srsf1b	80	90.104	ENSOARG00000008323	SRSF1	78	91.146	Ovis_aries
ENSPNAG00000014601	srsf1b	100	94.355	ENSPPAG00000043403	-	99	97.222	Pan_paniscus
ENSPNAG00000014601	srsf1b	100	94.355	ENSPPRG00000004238	-	100	94.355	Panthera_pardus
ENSPNAG00000014601	srsf1b	99	94.309	ENSPTRG00000049077	SRSF1	99	97.222	Pan_troglodytes
ENSPNAG00000014601	srsf1b	99	94.309	ENSPANG00000022305	-	99	97.222	Papio_anubis
ENSPNAG00000014601	srsf1b	99	74.059	ENSPANG00000030275	-	75	70.157	Papio_anubis
ENSPNAG00000014601	srsf1b	99	95.062	ENSPKIG00000007204	srsf1a	99	95.062	Paramormyrops_kingsleyae
ENSPNAG00000014601	srsf1b	100	97.959	ENSPKIG00000012857	srsf1b	100	97.959	Paramormyrops_kingsleyae
ENSPNAG00000014601	srsf1b	80	83.920	ENSPSIG00000009000	-	78	94.444	Pelodiscus_sinensis
ENSPNAG00000014601	srsf1b	78	90.426	ENSPMGG00000013112	-	82	89.894	Periophthalmus_magnuspinnatus
ENSPNAG00000014601	srsf1b	81	85.128	ENSPMGG00000005467	-	77	86.667	Periophthalmus_magnuspinnatus
ENSPNAG00000014601	srsf1b	100	94.355	ENSPEMG00000021416	Srsf1	100	94.355	Peromyscus_maniculatus_bairdii
ENSPNAG00000014601	srsf1b	100	94.378	ENSPCIG00000006076	-	100	94.378	Phascolarctos_cinereus
ENSPNAG00000014601	srsf1b	80	86.869	ENSPFOG00000018325	-	70	87.113	Poecilia_formosa
ENSPNAG00000014601	srsf1b	80	86.869	ENSPLAG00000008416	srsf1b	79	87.113	Poecilia_latipinna
ENSPNAG00000014601	srsf1b	80	86.869	ENSPMEG00000002388	-	79	87.113	Poecilia_mexicana
ENSPNAG00000014601	srsf1b	78	91.623	ENSPREG00000009667	srsf1a	78	91.623	Poecilia_reticulata
ENSPNAG00000014601	srsf1b	100	94.355	ENSPPYG00000008240	SRSF1	100	94.355	Pongo_abelii
ENSPNAG00000014601	srsf1b	100	94.355	ENSPCAG00000005199	SRSF1	100	94.355	Procavia_capensis
ENSPNAG00000014601	srsf1b	80	74.752	ENSPCOG00000025736	-	95	76.440	Propithecus_coquereli
ENSPNAG00000014601	srsf1b	100	94.355	ENSPCOG00000023654	-	99	97.222	Propithecus_coquereli
ENSPNAG00000014601	srsf1b	76	98.462	ENSPVAG00000000519	-	75	98.462	Pteropus_vampyrus
ENSPNAG00000014601	srsf1b	100	94.355	ENSRNOG00000050323	Srsf1	100	94.355	Rattus_norvegicus
ENSPNAG00000014601	srsf1b	99	94.309	ENSRBIG00000034445	-	99	97.222	Rhinopithecus_bieti
ENSPNAG00000014601	srsf1b	100	94.355	ENSRROG00000041506	-	99	97.222	Rhinopithecus_roxellana
ENSPNAG00000014601	srsf1b	100	94.355	ENSSBOG00000025377	-	99	97.222	Saimiri_boliviensis_boliviensis
ENSPNAG00000014601	srsf1b	100	94.378	ENSSHAG00000002552	-	100	94.378	Sarcophilus_harrisii
ENSPNAG00000014601	srsf1b	99	96.327	ENSSFOG00015004800	srsf1a	99	96.327	Scleropages_formosus
ENSPNAG00000014601	srsf1b	78	92.147	ENSSMAG00000007018	-	78	92.147	Scophthalmus_maximus
ENSPNAG00000014601	srsf1b	80	86.275	ENSSMAG00000009719	-	80	85.784	Scophthalmus_maximus
ENSPNAG00000014601	srsf1b	78	92.670	ENSSDUG00000011303	-	83	92.670	Seriola_dumerili
ENSPNAG00000014601	srsf1b	100	76.349	ENSSDUG00000003929	-	84	81.500	Seriola_dumerili
ENSPNAG00000014601	srsf1b	78	92.670	ENSSLDG00000010543	-	78	92.670	Seriola_lalandi_dorsalis
ENSPNAG00000014601	srsf1b	95	76.395	ENSSLDG00000016895	-	78	86.022	Seriola_lalandi_dorsalis
ENSPNAG00000014601	srsf1b	80	80.829	ENSSLDG00000016868	-	78	82.902	Seriola_lalandi_dorsalis
ENSPNAG00000014601	srsf1b	74	91.848	ENSSARG00000010949	-	63	93.478	Sorex_araneus
ENSPNAG00000014601	srsf1b	99	95.528	ENSSPUG00000000804	-	97	95.528	Sphenodon_punctatus
ENSPNAG00000014601	srsf1b	80	84.689	ENSSPAG00000014152	-	81	83.732	Stegastes_partitus
ENSPNAG00000014601	srsf1b	78	91.146	ENSSPAG00000022562	-	78	91.146	Stegastes_partitus
ENSPNAG00000014601	srsf1b	100	94.355	ENSSSCG00000017626	-	100	94.355	Sus_scrofa
ENSPNAG00000014601	srsf1b	73	94.565	ENSTGUG00000008416	-	100	94.565	Taeniopygia_guttata
ENSPNAG00000014601	srsf1b	78	91.099	ENSTRUG00000003691	srsf1a	78	91.099	Takifugu_rubripes
ENSPNAG00000014601	srsf1b	78	91.099	ENSTNIG00000016223	srsf1a	77	91.099	Tetraodon_nigroviridis
ENSPNAG00000014601	srsf1b	74	88.043	ENSTBEG00000015378	-	63	91.848	Tupaia_belangeri
ENSPNAG00000014601	srsf1b	53	85.606	ENSTTRG00000007310	SRSF1	72	90.152	Tursiops_truncatus
ENSPNAG00000014601	srsf1b	100	94.355	ENSUAMG00000009858	SRSF1	100	94.355	Ursus_americanus
ENSPNAG00000014601	srsf1b	99	94.309	ENSUMAG00000000455	-	97	94.309	Ursus_maritimus
ENSPNAG00000014601	srsf1b	80	89.340	ENSVPAG00000010094	SRSF1	79	92.386	Vicugna_pacos
ENSPNAG00000014601	srsf1b	99	94.309	ENSVVUG00000011882	-	97	94.309	Vulpes_vulpes
ENSPNAG00000014601	srsf1b	100	96.296	ENSXETG00000008954	srsf1	100	88.390	Xenopus_tropicalis
ENSPNAG00000014601	srsf1b	78	91.623	ENSXMAG00000011766	srsf1a	78	91.623	Xiphophorus_maculatus