EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000014625 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 6436 bases
Position: chrKV576951.1:50112-56547
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000009073	RVT_1	PF00078.27	5.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000035170	-	3108	-	ENSPNAP00000009073	1035 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000014625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000014625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000014625	-	97	60.938	ENSPNAG00000007038	-	97	61.024
ENSPNAG00000014625	-	97	73.107	ENSPNAG00000016635	-	96	73.107
ENSPNAG00000014625	-	97	67.179	ENSPNAG00000003539	-	96	67.179
ENSPNAG00000014625	-	92	61.000	ENSPNAG00000021754	-	93	61.000
ENSPNAG00000014625	-	85	70.309	ENSPNAG00000017596	-	97	70.309

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000014625	-	70	32.940	ENSACIG00000009025	-	92	32.940	Amphilophus_citrinellus
ENSPNAG00000014625	-	68	37.879	ENSACIG00000013116	-	72	37.879	Amphilophus_citrinellus
ENSPNAG00000014625	-	90	31.086	ENSACIG00000007038	-	90	30.841	Amphilophus_citrinellus
ENSPNAG00000014625	-	90	37.169	ENSAMXG00000042811	-	95	36.628	Astyanax_mexicanus
ENSPNAG00000014625	-	89	42.691	ENSCPBG00000003842	-	79	42.691	Chrysemys_picta_bellii
ENSPNAG00000014625	-	55	34.907	ENSCVAG00000004138	-	55	34.907	Cyprinodon_variegatus
ENSPNAG00000014625	-	81	42.071	ENSELUG00000004618	-	86	42.173	Esox_lucius
ENSPNAG00000014625	-	73	35.086	ENSELUG00000004597	-	89	35.068	Esox_lucius
ENSPNAG00000014625	-	55	36.789	ENSFHEG00000022106	-	54	36.789	Fundulus_heteroclitus
ENSPNAG00000014625	-	50	32.872	ENSGMOG00000005227	-	98	32.872	Gadus_morhua
ENSPNAG00000014625	-	88	34.609	ENSHCOG00000000471	-	84	34.609	Hippocampus_comes
ENSPNAG00000014625	-	88	34.991	ENSHCOG00000007397	-	85	34.991	Hippocampus_comes
ENSPNAG00000014625	-	88	34.991	ENSHCOG00000007389	-	85	34.991	Hippocampus_comes
ENSPNAG00000014625	-	53	32.540	ENSLBEG00000004576	-	79	32.540	Labrus_bergylta
ENSPNAG00000014625	-	61	33.240	ENSLBEG00000003745	-	91	31.830	Labrus_bergylta
ENSPNAG00000014625	-	53	32.540	ENSLBEG00000006732	-	78	32.540	Labrus_bergylta
ENSPNAG00000014625	-	51	31.227	ENSLACG00000009240	-	92	31.047	Latimeria_chalumnae
ENSPNAG00000014625	-	87	31.546	ENSLOCG00000011928	-	99	31.546	Lepisosteus_oculatus
ENSPNAG00000014625	-	90	31.868	ENSLOCG00000017064	-	98	31.868	Lepisosteus_oculatus
ENSPNAG00000014625	-	71	31.962	ENSMAMG00000019985	-	70	32.080	Mastacembelus_armatus
ENSPNAG00000014625	-	64	38.710	ENSPLAG00000011810	-	65	38.434	Poecilia_latipinna
ENSPNAG00000014625	-	69	35.506	ENSPLAG00000023379	-	92	35.678	Poecilia_latipinna
ENSPNAG00000014625	-	67	37.797	ENSPLAG00000022994	-	68	37.797	Poecilia_latipinna
ENSPNAG00000014625	-	67	35.959	ENSPMEG00000003431	-	69	36.239	Poecilia_mexicana
ENSPNAG00000014625	-	69	31.479	ENSPMEG00000008574	-	74	31.479	Poecilia_mexicana
ENSPNAG00000014625	-	54	35.395	ENSPREG00000005756	-	52	35.395	Poecilia_reticulata
ENSPNAG00000014625	-	90	36.286	ENSPREG00000012484	-	87	35.932	Poecilia_reticulata
ENSPNAG00000014625	-	90	42.975	ENSXCOG00000013093	-	87	42.975	Xiphophorus_couchianus
ENSPNAG00000014625	-	70	35.897	ENSXCOG00000008881	-	85	35.897	Xiphophorus_couchianus
ENSPNAG00000014625	-	87	35.192	ENSXMAG00000028672	-	82	35.192	Xiphophorus_maculatus