EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000014780 (Gene tree)
Gene ID: 108439081
Gene Symbol: fscn1b
Alias: si:ch211-160d14.1
Full Name: fascin-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 14315 bases
Position: chrKV575580.1:288336-302650
Accession: 108439081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000009230	FRG1	PF06229.12	8.6e-22	1	1
ENSPNAP00000009225	FRG1	PF06229.12	9.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000015512	-	1467	-	ENSPNAP00000009230	488 (aa)	-	-
ENSPNAT00000015501	-	4341	XM_017717275	ENSPNAP00000009225	492 (aa)	XP_017572764	UPI000814A068

Gene Model

Click here to download ENSPNAG00000014780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000014780's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000014780	fscn1b	99	50.615	ENSACIG00000002025	fscn2b	99	50.615	Amphilophus_citrinellus
ENSPNAG00000014780	fscn1b	99	50.000	ENSATEG00000013607	fscn2b	99	50.000	Anabas_testudineus
ENSPNAG00000014780	fscn1b	66	65.899	ENSATEG00000005335	fscn1b	100	65.899	Anabas_testudineus
ENSPNAG00000014780	fscn1b	99	50.308	ENSACAG00000015216	FSCN2	99	50.102	Anolis_carolinensis
ENSPNAG00000014780	fscn1b	99	50.205	ENSACLG00000014453	fscn2b	99	50.205	Astatotilapia_calliptera
ENSPNAG00000014780	fscn1b	99	62.986	ENSCSEG00000019160	fscn1a	99	62.173	Cynoglossus_semilaevis
ENSPNAG00000014780	fscn1b	92	47.788	ENSCVAG00000018645	fscn2b	100	47.788	Cyprinodon_variegatus
ENSPNAG00000014780	fscn1b	99	41.897	ENSEBUG00000014215	FSCN2	98	41.897	Eptatretus_burgeri
ENSPNAG00000014780	fscn1b	99	61.350	ENSELUG00000011363	fscn1a	99	60.606	Esox_lucius
ENSPNAG00000014780	fscn1b	99	50.964	ENSFALG00000012651	FSCN2	84	50.964	Ficedula_albicollis
ENSPNAG00000014780	fscn1b	99	50.513	ENSGALG00000023354	FSCN2	98	50.513	Gallus_gallus
ENSPNAG00000014780	fscn1b	100	61.414	ENSGAFG00000013512	fscn1b	100	61.414	Gambusia_affinis
ENSPNAG00000014780	fscn1b	99	50.205	ENSHBUG00000021952	fscn2b	99	50.205	Haplochromis_burtoni
ENSPNAG00000014780	fscn1b	99	48.665	ENSHCOG00000015421	fscn2a	98	48.665	Hippocampus_comes
ENSPNAG00000014780	fscn1b	98	62.268	ENSLACG00000016447	FSCN1	98	62.268	Latimeria_chalumnae
ENSPNAG00000014780	fscn1b	99	64.271	ENSLOCG00000004693	fscn1a	96	64.271	Lepisosteus_oculatus
ENSPNAG00000014780	fscn1b	99	50.205	ENSMZEG00005009107	fscn2b	99	50.205	Maylandia_zebra
ENSPNAG00000014780	fscn1b	99	50.205	ENSNBRG00000021249	fscn2b	99	50.205	Neolamprologus_brichardi
ENSPNAG00000014780	fscn1b	99	50.615	ENSONIG00000019860	fscn2b	99	50.615	Oreochromis_niloticus
ENSPNAG00000014780	fscn1b	100	61.694	ENSORLG00000009620	fscn1b	100	61.694	Oryzias_latipes
ENSPNAG00000014780	fscn1b	100	61.290	ENSORLG00020010658	fscn1b	100	61.290	Oryzias_latipes_hni
ENSPNAG00000014780	fscn1b	100	61.694	ENSORLG00015010020	fscn1b	100	61.694	Oryzias_latipes_hsok
ENSPNAG00000014780	fscn1b	100	61.694	ENSOMEG00000019920	fscn1b	100	61.694	Oryzias_melastigma
ENSPNAG00000014780	fscn1b	99	48.871	ENSOMEG00000008432	fscn2a	99	48.671	Oryzias_melastigma
ENSPNAG00000014780	fscn1b	99	62.218	ENSPKIG00000010464	fscn1a	99	61.663	Paramormyrops_kingsleyae
ENSPNAG00000014780	fscn1b	99	49.385	ENSPKIG00000013426	fscn2b	98	49.385	Paramormyrops_kingsleyae
ENSPNAG00000014780	fscn1b	100	61.414	ENSPFOG00000011521	fscn1b	100	61.414	Poecilia_formosa
ENSPNAG00000014780	fscn1b	100	61.010	ENSPLAG00000006140	fscn1b	100	61.010	Poecilia_latipinna
ENSPNAG00000014780	fscn1b	100	61.414	ENSPMEG00000019975	fscn1b	100	61.414	Poecilia_mexicana
ENSPNAG00000014780	fscn1b	99	50.205	ENSPNYG00000019474	fscn2b	99	50.205	Pundamilia_nyererei
ENSPNAG00000014780	fscn1b	99	64.271	ENSSPUG00000002887	FSCN1	99	63.692	Sphenodon_punctatus
ENSPNAG00000014780	fscn1b	99	49.692	ENSSPUG00000014373	FSCN2	98	49.692	Sphenodon_punctatus
ENSPNAG00000014780	fscn1b	59	52.721	ENSTGUG00000014701	FSCN2	95	52.721	Taeniopygia_guttata
ENSPNAG00000014780	fscn1b	99	59.918	ENSTRUG00000005218	fscn1a	99	59.155	Takifugu_rubripes
ENSPNAG00000014780	fscn1b	99	48.871	ENSTRUG00000011674	fscn2a	98	48.871	Takifugu_rubripes
ENSPNAG00000014780	fscn1b	99	49.692	ENSTNIG00000009778	fscn2a	97	49.692	Tetraodon_nigroviridis
ENSPNAG00000014780	fscn1b	100	60.808	ENSXCOG00000005719	fscn1b	100	60.808	Xiphophorus_couchianus
ENSPNAG00000014780	fscn1b	100	60.606	ENSXMAG00000012851	fscn1b	100	60.606	Xiphophorus_maculatus