EuRBPDB

Description

Ensembl ID: ENSPNAG00000014869 (Gene tree)
Gene ID: 108421584
Gene Symbol: pprc1
Alias: cb478|sb:cb478|wu:fb72d09|wu:fj86g08
Full Name: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 12747 bases
Position: chrKV575301.1:1489288-1502034
Accession: 108421584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000009370	RRM_1	PF00076.22	8.6e-09	1	1
ENSPNAP00000009383	RRM_1	PF00076.22	8.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000015717	-	4407	XM_017690501	ENSPNAP00000009383	1318 (aa)	XP_017545990	-
ENSPNAT00000015705	-	4715	-	ENSPNAP00000009370	1288 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000014869	pprc1	52	73.611	ENSACIG00000022532	pprc1	80	73.611	Amphilophus_citrinellus
ENSPNAG00000014869	pprc1	98	41.877	ENSACLG00000007927	pprc1	82	40.555	Astatotilapia_calliptera
ENSPNAG00000014869	pprc1	98	66.969	ENSAMXG00000042630	pprc1	80	66.355	Astyanax_mexicanus
ENSPNAG00000014869	pprc1	65	61.745	ENSDARG00000098666	si:dkey-93h22.8	58	61.745	Danio_rerio
ENSPNAG00000014869	pprc1	80	40.750	ENSHBUG00000001258	pprc1	82	40.470	Haplochromis_burtoni
ENSPNAG00000014869	pprc1	80	58.550	ENSIPUG00000007999	pprc1	80	58.457	Ictalurus_punctatus
ENSPNAG00000014869	pprc1	98	42.053	ENSMZEG00005002989	pprc1	82	40.503	Maylandia_zebra
ENSPNAG00000014869	pprc1	79	39.502	ENSMALG00000016857	pprc1	81	38.612	Monopterus_albus
ENSPNAG00000014869	pprc1	81	39.642	ENSONIG00000009509	pprc1	82	40.105	Oreochromis_niloticus
ENSPNAG00000014869	pprc1	66	79.032	ENSPREG00000020657	pprc1	79	71.812	Poecilia_reticulata
ENSPNAG00000014869	pprc1	79	40.639	ENSSDUG00000022798	pprc1	80	41.379	Seriola_dumerili