EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000014912 (Gene tree)
Gene ID: 108426189
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 7936 bases
Position: chrKV575325.1:68089-76024
Accession: 108426189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000009428	RRM_1	PF00076.22	2.1e-28	1	2
ENSPNAP00000009428	RRM_1	PF00076.22	2.1e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000016008	-	3128	XM_017695494	ENSPNAP00000009428	395 (aa)	XP_017550983	UPI000814239E

Gene Model

Click here to download ENSPNAG00000014912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000014912's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000014912	grsf1	72	60.759	ENSPNAG00000000466	hnrnph3	93	48.128
ENSPNAG00000014912	grsf1	72	45.201	ENSPNAG00000000439	hnrnph1	85	44.048
ENSPNAG00000014912	grsf1	72	44.545	ENSPNAG00000002784	hnrnph1l	94	42.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000014912	grsf1	81	57.658	ENSAPOG00000012487	grsf1	83	57.658	Acanthochromis_polyacanthus
ENSPNAG00000014912	grsf1	79	59.502	ENSACIG00000005871	grsf1	84	59.248	Amphilophus_citrinellus
ENSPNAG00000014912	grsf1	81	57.186	ENSAOCG00000017462	-	83	57.186	Amphiprion_ocellaris
ENSPNAG00000014912	grsf1	81	56.716	ENSAPEG00000007240	-	83	56.716	Amphiprion_percula
ENSPNAG00000014912	grsf1	83	57.325	ENSATEG00000007185	grsf1	80	57.325	Anabas_testudineus
ENSPNAG00000014912	grsf1	78	57.012	ENSACLG00000003685	-	82	57.012	Astatotilapia_calliptera
ENSPNAG00000014912	grsf1	100	70.833	ENSAMXG00000012270	grsf1	99	70.833	Astyanax_mexicanus
ENSPNAG00000014912	grsf1	89	61.881	ENSCSEG00000019209	-	87	61.881	Cynoglossus_semilaevis
ENSPNAG00000014912	grsf1	97	50.258	ENSCVAG00000004476	grsf1	98	50.258	Cyprinodon_variegatus
ENSPNAG00000014912	grsf1	99	51.637	ENSDARG00000053021	grsf1	96	51.637	Danio_rerio
ENSPNAG00000014912	grsf1	95	40.306	ENSFHEG00000013358	-	96	41.071	Fundulus_heteroclitus
ENSPNAG00000014912	grsf1	73	62.567	ENSGMOG00000014047	grsf1	80	62.567	Gadus_morhua
ENSPNAG00000014912	grsf1	83	52.187	ENSGAFG00000004496	grsf1	86	52.187	Gambusia_affinis
ENSPNAG00000014912	grsf1	83	53.538	ENSGACG00000014447	grsf1	99	53.538	Gasterosteus_aculeatus
ENSPNAG00000014912	grsf1	85	54.062	ENSHBUG00000006284	grsf1	87	54.062	Haplochromis_burtoni
ENSPNAG00000014912	grsf1	84	51.163	ENSHCOG00000007715	-	88	51.163	Hippocampus_comes
ENSPNAG00000014912	grsf1	99	66.838	ENSIPUG00000010533	grsf1	99	66.838	Ictalurus_punctatus
ENSPNAG00000014912	grsf1	87	50.135	ENSKMAG00000004528	grsf1	78	53.495	Kryptolebias_marmoratus
ENSPNAG00000014912	grsf1	72	52.069	ENSLBEG00000018100	grsf1	93	52.069	Labrus_bergylta
ENSPNAG00000014912	grsf1	81	56.932	ENSMAMG00000002627	grsf1	85	56.932	Mastacembelus_armatus
ENSPNAG00000014912	grsf1	78	57.143	ENSMZEG00005020633	-	82	57.143	Maylandia_zebra
ENSPNAG00000014912	grsf1	78	60.943	ENSMMOG00000014231	grsf1	89	58.929	Mola_mola
ENSPNAG00000014912	grsf1	85	53.826	ENSMALG00000000251	grsf1	93	53.826	Monopterus_albus
ENSPNAG00000014912	grsf1	77	56.656	ENSNBRG00000017774	grsf1	78	56.656	Neolamprologus_brichardi
ENSPNAG00000014912	grsf1	94	65.464	ENSONIG00000014119	grsf1	100	65.464	Oreochromis_niloticus
ENSPNAG00000014912	grsf1	78	53.416	ENSORLG00000030211	grsf1	82	53.416	Oryzias_latipes
ENSPNAG00000014912	grsf1	78	53.704	ENSORLG00020014383	grsf1	83	54.180	Oryzias_latipes_hni
ENSPNAG00000014912	grsf1	78	52.941	ENSORLG00015006520	grsf1	83	53.416	Oryzias_latipes_hsok
ENSPNAG00000014912	grsf1	78	56.698	ENSOMEG00000009181	grsf1	84	57.453	Oryzias_melastigma
ENSPNAG00000014912	grsf1	80	57.831	ENSPKIG00000019432	grsf1	80	57.831	Paramormyrops_kingsleyae
ENSPNAG00000014912	grsf1	83	55.337	ENSPMGG00000013654	grsf1	96	55.337	Periophthalmus_magnuspinnatus
ENSPNAG00000014912	grsf1	86	48.767	ENSPFOG00000006122	grsf1	89	48.767	Poecilia_formosa
ENSPNAG00000014912	grsf1	86	49.307	ENSPLAG00000020977	grsf1	89	49.307	Poecilia_latipinna
ENSPNAG00000014912	grsf1	86	49.315	ENSPMEG00000012485	grsf1	94	48.168	Poecilia_mexicana
ENSPNAG00000014912	grsf1	81	50.882	ENSPREG00000013383	grsf1	83	51.471	Poecilia_reticulata
ENSPNAG00000014912	grsf1	78	57.407	ENSPNYG00000005379	grsf1	81	57.407	Pundamilia_nyererei
ENSPNAG00000014912	grsf1	100	42.958	ENSSFOG00015014620	grsf1	99	42.958	Scleropages_formosus
ENSPNAG00000014912	grsf1	78	55.352	ENSSMAG00000014181	grsf1	72	55.352	Scophthalmus_maximus
ENSPNAG00000014912	grsf1	82	61.012	ENSSDUG00000009397	-	95	64.483	Seriola_dumerili
ENSPNAG00000014912	grsf1	82	62.090	ENSSLDG00000025494	grsf1	95	61.379	Seriola_lalandi_dorsalis
ENSPNAG00000014912	grsf1	84	50.824	ENSSPAG00000023296	grsf1	91	50.824	Stegastes_partitus
ENSPNAG00000014912	grsf1	82	54.545	ENSTRUG00000015354	grsf1	90	54.545	Takifugu_rubripes
ENSPNAG00000014912	grsf1	72	56.803	ENSTNIG00000015350	-	95	56.803	Tetraodon_nigroviridis
ENSPNAG00000014912	grsf1	88	48.378	ENSXMAG00000029710	grsf1	92	48.378	Xiphophorus_maculatus