EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000014931 (Gene tree)
Gene ID: 108439077
Gene Symbol: ptcd1
Alias: wu:fi36d06
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 12887 bases
Position: chrKV575580.1:105185-118071
Accession: 108439077
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000009435	PPR	PF01535.20	1.7e-12	1	1
ENSPNAP00000009419	PPR	PF01535.20	2.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000015861	-	4812	XM_017717271	ENSPNAP00000009435	685 (aa)	XP_017572760	-
ENSPNAT00000035314	-	2106	-	ENSPNAP00000009419	701 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000014931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000014931's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000014931	ptcd1	93	49.618	ENSG00000106246	PTCD1	92	49.924	Homo_sapiens
ENSPNAG00000014931	ptcd1	93	49.618	ENSG00000248919	ATP5MF-PTCD1	86	49.924	Homo_sapiens
ENSPNAG00000014931	ptcd1	90	49.921	ENSAPOG00000010679	ptcd1	91	50.822	Acanthochromis_polyacanthus
ENSPNAG00000014931	ptcd1	92	50.912	ENSAMEG00000006224	-	83	51.969	Ailuropoda_melanoleuca
ENSPNAG00000014931	ptcd1	96	50.517	ENSACIG00000017861	ptcd1	91	51.698	Amphilophus_citrinellus
ENSPNAG00000014931	ptcd1	88	51.634	ENSAOCG00000022617	ptcd1	89	50.654	Amphiprion_ocellaris
ENSPNAG00000014931	ptcd1	92	52.031	ENSAOCG00000020741	-	88	51.094	Amphiprion_ocellaris
ENSPNAG00000014931	ptcd1	92	52.031	ENSAPEG00000022632	ptcd1	88	51.250	Amphiprion_percula
ENSPNAG00000014931	ptcd1	88	52.512	ENSATEG00000007016	ptcd1	81	54.132	Anabas_testudineus
ENSPNAG00000014931	ptcd1	90	51.800	ENSAPLG00000006862	-	94	52.941	Anas_platyrhynchos
ENSPNAG00000014931	ptcd1	90	51.929	ENSACAG00000012871	-	81	51.768	Anolis_carolinensis
ENSPNAG00000014931	ptcd1	91	49.457	ENSANAG00000035790	-	90	50.641	Aotus_nancymaae
ENSPNAG00000014931	ptcd1	89	52.320	ENSACLG00000002824	ptcd1	81	53.936	Astatotilapia_calliptera
ENSPNAG00000014931	ptcd1	99	68.715	ENSAMXG00000037292	ptcd1	98	68.575	Astyanax_mexicanus
ENSPNAG00000014931	ptcd1	97	49.349	ENSBTAG00000020440	-	81	50.374	Bos_taurus
ENSPNAG00000014931	ptcd1	90	50.316	ENSCJAG00000015815	-	87	51.461	Callithrix_jacchus
ENSPNAG00000014931	ptcd1	92	51.618	ENSCAFG00000015055	-	82	51.817	Canis_familiaris
ENSPNAG00000014931	ptcd1	92	51.618	ENSCAFG00020014480	-	82	51.817	Canis_lupus_dingo
ENSPNAG00000014931	ptcd1	97	50.505	ENSCHIG00000027000	-	96	50.072	Capra_hircus
ENSPNAG00000014931	ptcd1	90	49.145	ENSTSYG00000029495	-	89	50.553	Carlito_syrichta
ENSPNAG00000014931	ptcd1	90	49.134	ENSCAPG00000014660	-	94	50.079	Cavia_aperea
ENSPNAG00000014931	ptcd1	90	49.764	ENSCPOG00000001780	-	88	50.794	Cavia_porcellus
ENSPNAG00000014931	ptcd1	90	49.131	ENSCCAG00000034025	-	89	50.475	Cebus_capucinus
ENSPNAG00000014931	ptcd1	90	48.973	ENSCATG00000040859	-	86	49.840	Cercocebus_atys
ENSPNAG00000014931	ptcd1	92	50.231	ENSCLAG00000006354	-	88	50.955	Chinchilla_lanigera
ENSPNAG00000014931	ptcd1	83	47.782	ENSCSAG00000017794	-	83	48.873	Chlorocebus_sabaeus
ENSPNAG00000014931	ptcd1	91	51.524	ENSCPBG00000020866	-	88	51.372	Chrysemys_picta_bellii
ENSPNAG00000014931	ptcd1	79	31.439	ENSCING00000007717	-	90	31.985	Ciona_intestinalis
ENSPNAG00000014931	ptcd1	90	49.608	ENSCANG00000023441	-	86	49.759	Colobus_angolensis_palliatus
ENSPNAG00000014931	ptcd1	90	48.762	ENSCGRG00001023686	Ptcd1	87	49.522	Cricetulus_griseus_chok1gshd
ENSPNAG00000014931	ptcd1	90	48.762	ENSCGRG00000015031	Ptcd1	86	49.522	Cricetulus_griseus_crigri
ENSPNAG00000014931	ptcd1	92	49.379	ENSCSEG00000002378	ptcd1	84	50.971	Cynoglossus_semilaevis
ENSPNAG00000014931	ptcd1	90	50.874	ENSCVAG00000003621	ptcd1	90	51.797	Cyprinodon_variegatus
ENSPNAG00000014931	ptcd1	90	51.510	ENSCVAG00000015826	ptcd1	83	52.736	Cyprinodon_variegatus
ENSPNAG00000014931	ptcd1	89	66.395	ENSDARG00000076176	ptcd1	88	66.395	Danio_rerio
ENSPNAG00000014931	ptcd1	91	50.389	ENSDNOG00000009957	-	91	50.228	Dasypus_novemcinctus
ENSPNAG00000014931	ptcd1	98	46.915	ENSDORG00000000740	Ptcd1	96	47.202	Dipodomys_ordii
ENSPNAG00000014931	ptcd1	91	38.981	ENSEBUG00000014515	ptcd1	98	40.311	Eptatretus_burgeri
ENSPNAG00000014931	ptcd1	98	48.645	ENSEASG00005002480	-	95	49.927	Equus_asinus_asinus
ENSPNAG00000014931	ptcd1	98	48.787	ENSECAG00000016617	-	93	50.221	Equus_caballus
ENSPNAG00000014931	ptcd1	90	52.566	ENSELUG00000016517	ptcd1	87	50.681	Esox_lucius
ENSPNAG00000014931	ptcd1	92	50.998	ENSFCAG00000015069	-	88	51.030	Felis_catus
ENSPNAG00000014931	ptcd1	90	50.940	ENSFALG00000013803	-	85	51.452	Ficedula_albicollis
ENSPNAG00000014931	ptcd1	92	50.230	ENSFDAG00000006393	-	88	51.343	Fukomys_damarensis
ENSPNAG00000014931	ptcd1	77	52.381	ENSFHEG00000012491	ptcd1	87	54.215	Fundulus_heteroclitus
ENSPNAG00000014931	ptcd1	86	50.495	ENSGMOG00000007639	ptcd1	91	51.458	Gadus_morhua
ENSPNAG00000014931	ptcd1	89	52.756	ENSGALG00000004711	-	87	51.969	Gallus_gallus
ENSPNAG00000014931	ptcd1	95	50.077	ENSGAFG00000013175	ptcd1	91	49.615	Gambusia_affinis
ENSPNAG00000014931	ptcd1	85	56.410	ENSGACG00000016607	ptcd1	88	55.897	Gasterosteus_aculeatus
ENSPNAG00000014931	ptcd1	86	51.047	ENSGAGG00000021832	-	88	51.067	Gopherus_agassizii
ENSPNAG00000014931	ptcd1	93	49.618	ENSGGOG00000015123	-	92	49.924	Gorilla_gorilla
ENSPNAG00000014931	ptcd1	89	52.160	ENSHBUG00000018275	ptcd1	81	53.523	Haplochromis_burtoni
ENSPNAG00000014931	ptcd1	92	50.231	ENSHGLG00000017621	-	88	51.266	Heterocephalus_glaber_female
ENSPNAG00000014931	ptcd1	92	50.231	ENSHGLG00100007218	-	88	51.266	Heterocephalus_glaber_male
ENSPNAG00000014931	ptcd1	91	48.678	ENSHCOG00000010784	ptcd1	83	51.597	Hippocampus_comes
ENSPNAG00000014931	ptcd1	96	48.817	ENSSTOG00000001682	-	91	50.762	Ictidomys_tridecemlineatus
ENSPNAG00000014931	ptcd1	92	49.080	ENSJJAG00000000319	Ptcd1	89	50.397	Jaculus_jaculus
ENSPNAG00000014931	ptcd1	93	51.097	ENSKMAG00000008708	ptcd1	85	51.097	Kryptolebias_marmoratus
ENSPNAG00000014931	ptcd1	96	49.123	ENSLBEG00000008061	ptcd1	90	49.269	Labrus_bergylta
ENSPNAG00000014931	ptcd1	92	50.760	ENSLACG00000011172	ptcd1	85	52.683	Latimeria_chalumnae
ENSPNAG00000014931	ptcd1	92	53.752	ENSLOCG00000004833	ptcd1	98	52.215	Lepisosteus_oculatus
ENSPNAG00000014931	ptcd1	91	49.921	ENSLAFG00000002588	-	93	49.037	Loxodonta_africana
ENSPNAG00000014931	ptcd1	90	48.973	ENSMFAG00000041324	-	86	49.840	Macaca_fascicularis
ENSPNAG00000014931	ptcd1	90	48.815	ENSMMUG00000030408	-	86	49.679	Macaca_mulatta
ENSPNAG00000014931	ptcd1	90	49.131	ENSMNEG00000043786	-	86	50.000	Macaca_nemestrina
ENSPNAG00000014931	ptcd1	90	35.861	ENSMLEG00000031179	-	84	36.735	Mandrillus_leucophaeus
ENSPNAG00000014931	ptcd1	94	52.115	ENSMAMG00000007623	ptcd1	84	52.681	Mastacembelus_armatus
ENSPNAG00000014931	ptcd1	89	52.640	ENSMZEG00005012722	ptcd1	81	53.936	Maylandia_zebra
ENSPNAG00000014931	ptcd1	83	54.359	ENSMGAG00000004211	-	75	54.799	Meleagris_gallopavo
ENSPNAG00000014931	ptcd1	92	48.851	ENSMICG00000017428	-	89	49.612	Microcebus_murinus
ENSPNAG00000014931	ptcd1	92	50.228	ENSMMOG00000020243	ptcd1	91	52.649	Mola_mola
ENSPNAG00000014931	ptcd1	90	48.674	ENSMODG00000001350	-	84	49.204	Monodelphis_domestica
ENSPNAG00000014931	ptcd1	89	52.960	ENSMALG00000018442	ptcd1	81	53.344	Monopterus_albus
ENSPNAG00000014931	ptcd1	97	48.489	MGP_CAROLIEiJ_G0028011	Ptcd1	95	49.554	Mus_caroli
ENSPNAG00000014931	ptcd1	98	48.777	ENSMUSG00000029624	Ptcd1	93	49.405	Mus_musculus
ENSPNAG00000014931	ptcd1	97	49.495	MGP_PahariEiJ_G0024580	Ptcd1	95	50.597	Mus_pahari
ENSPNAG00000014931	ptcd1	98	48.633	MGP_SPRETEiJ_G0029012	Ptcd1	93	49.554	Mus_spretus
ENSPNAG00000014931	ptcd1	92	50.926	ENSMPUG00000016518	-	88	51.343	Mustela_putorius_furo
ENSPNAG00000014931	ptcd1	91	52.516	ENSMLUG00000010994	-	90	50.508	Myotis_lucifugus
ENSPNAG00000014931	ptcd1	91	51.302	ENSNBRG00000010079	ptcd1	88	52.396	Neolamprologus_brichardi
ENSPNAG00000014931	ptcd1	80	50.444	ENSNLEG00000011060	-	90	50.912	Nomascus_leucogenys
ENSPNAG00000014931	ptcd1	90	50.478	ENSMEUG00000006930	-	87	50.000	Notamacropus_eugenii
ENSPNAG00000014931	ptcd1	81	54.887	ENSOPRG00000013647	-	87	47.204	Ochotona_princeps
ENSPNAG00000014931	ptcd1	86	51.010	ENSONIG00000003168	ptcd1	95	50.676	Oreochromis_niloticus
ENSPNAG00000014931	ptcd1	90	45.070	ENSOANG00000007728	-	83	44.629	Ornithorhynchus_anatinus
ENSPNAG00000014931	ptcd1	93	49.922	ENSOCUG00000010584	-	88	49.767	Oryctolagus_cuniculus
ENSPNAG00000014931	ptcd1	90	52.013	ENSORLG00000009275	ptcd1	87	51.369	Oryzias_latipes
ENSPNAG00000014931	ptcd1	90	52.174	ENSORLG00020000988	ptcd1	88	51.530	Oryzias_latipes_hni
ENSPNAG00000014931	ptcd1	89	51.360	ENSORLG00015010557	ptcd1	85	52.254	Oryzias_latipes_hsok
ENSPNAG00000014931	ptcd1	89	51.525	ENSOMEG00000020627	ptcd1	86	52.931	Oryzias_melastigma
ENSPNAG00000014931	ptcd1	92	49.847	ENSOGAG00000010877	-	89	50.317	Otolemur_garnettii
ENSPNAG00000014931	ptcd1	97	44.678	ENSOARG00000018676	-	94	45.194	Ovis_aries
ENSPNAG00000014931	ptcd1	90	49.763	ENSPPAG00000036024	-	92	49.618	Pan_paniscus
ENSPNAG00000014931	ptcd1	92	50.923	ENSPPRG00000003478	-	89	51.030	Panthera_pardus
ENSPNAG00000014931	ptcd1	90	49.763	ENSPTRG00000019452	-	92	49.618	Pan_troglodytes
ENSPNAG00000014931	ptcd1	90	49.131	ENSPANG00000016730	-	86	50.000	Papio_anubis
ENSPNAG00000014931	ptcd1	90	54.617	ENSPKIG00000014215	ptcd1	88	54.133	Paramormyrops_kingsleyae
ENSPNAG00000014931	ptcd1	89	49.440	ENSPSIG00000011184	-	92	53.188	Pelodiscus_sinensis
ENSPNAG00000014931	ptcd1	77	39.522	ENSPMAG00000009667	ptcd1	100	40.115	Petromyzon_marinus
ENSPNAG00000014931	ptcd1	90	48.131	ENSPCIG00000024778	-	84	48.172	Phascolarctos_cinereus
ENSPNAG00000014931	ptcd1	95	49.403	ENSPFOG00000004458	ptcd1	90	50.855	Poecilia_formosa
ENSPNAG00000014931	ptcd1	96	48.968	ENSPLAG00000011051	ptcd1	90	50.855	Poecilia_latipinna
ENSPNAG00000014931	ptcd1	95	49.104	ENSPMEG00000020547	ptcd1	90	50.700	Poecilia_mexicana
ENSPNAG00000014931	ptcd1	92	50.309	ENSPREG00000000059	ptcd1	87	51.294	Poecilia_reticulata
ENSPNAG00000014931	ptcd1	94	48.516	ENSPPYG00000017377	-	97	49.311	Pongo_abelii
ENSPNAG00000014931	ptcd1	82	56.489	ENSPCAG00000001852	-	85	54.198	Procavia_capensis
ENSPNAG00000014931	ptcd1	92	49.238	ENSPCOG00000018596	-	88	50.718	Propithecus_coquereli
ENSPNAG00000014931	ptcd1	58	56.842	ENSPVAG00000007529	-	61	56.842	Pteropus_vampyrus
ENSPNAG00000014931	ptcd1	89	52.000	ENSPNYG00000019993	ptcd1	81	53.188	Pundamilia_nyererei
ENSPNAG00000014931	ptcd1	91	50.233	ENSRNOG00000000987	Ptcd1	93	49.165	Rattus_norvegicus
ENSPNAG00000014931	ptcd1	90	49.451	ENSRBIG00000043393	-	86	50.080	Rhinopithecus_bieti
ENSPNAG00000014931	ptcd1	90	49.451	ENSRROG00000036420	-	86	50.162	Rhinopithecus_roxellana
ENSPNAG00000014931	ptcd1	92	49.541	ENSSBOG00000024114	-	89	50.633	Saimiri_boliviensis_boliviensis
ENSPNAG00000014931	ptcd1	92	48.920	ENSSHAG00000011376	-	93	49.361	Sarcophilus_harrisii
ENSPNAG00000014931	ptcd1	90	55.222	ENSSFOG00015007909	ptcd1	84	54.358	Scleropages_formosus
ENSPNAG00000014931	ptcd1	88	50.891	ENSSMAG00000000218	ptcd1	91	52.542	Scophthalmus_maximus
ENSPNAG00000014931	ptcd1	89	53.045	ENSSDUG00000015671	ptcd1	85	54.077	Seriola_dumerili
ENSPNAG00000014931	ptcd1	92	52.160	ENSSLDG00000014261	ptcd1	87	52.885	Seriola_lalandi_dorsalis
ENSPNAG00000014931	ptcd1	91	49.690	ENSSPUG00000003540	-	85	49.381	Sphenodon_punctatus
ENSPNAG00000014931	ptcd1	87	55.000	ENSSPAG00000011049	ptcd1	81	55.000	Stegastes_partitus
ENSPNAG00000014931	ptcd1	91	52.139	ENSSSCG00000007622	-	93	51.669	Sus_scrofa
ENSPNAG00000014931	ptcd1	82	53.012	ENSTGUG00000007563	-	90	54.446	Taeniopygia_guttata
ENSPNAG00000014931	ptcd1	89	52.404	ENSTRUG00000013471	ptcd1	80	53.465	Takifugu_rubripes
ENSPNAG00000014931	ptcd1	88	51.535	ENSTNIG00000008271	ptcd1	83	52.667	Tetraodon_nigroviridis
ENSPNAG00000014931	ptcd1	98	48.784	ENSTBEG00000011021	-	97	48.641	Tupaia_belangeri
ENSPNAG00000014931	ptcd1	92	49.387	ENSTTRG00000003006	-	88	50.399	Tursiops_truncatus
ENSPNAG00000014931	ptcd1	95	49.560	ENSUAMG00000008049	-	92	50.456	Ursus_americanus
ENSPNAG00000014931	ptcd1	92	51.926	ENSVVUG00000008836	-	88	51.994	Vulpes_vulpes
ENSPNAG00000014931	ptcd1	98	44.936	ENSXETG00000009891	ptcd1	97	44.508	Xenopus_tropicalis
ENSPNAG00000014931	ptcd1	90	49.762	ENSXMAG00000015540	ptcd1	86	49.302	Xiphophorus_maculatus