EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000014957 (Gene tree)
Gene ID: 108435815
Gene Symbol: msi2a
Alias: cb746|fi47b09|msi2|wu:fb02d08|wu:fi32d12|wu:fi47b09
Full Name: RNA-binding protein Musashi homolog 2-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 348244 bases
Position: chrKV575479.1:385091-733334
Accession: 108435815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000009421	RRM_1	PF00076.22	5.3e-34	1	2
ENSPNAP00000009421	RRM_1	PF00076.22	5.3e-34	2	2
ENSPNAP00000029039	RRM_1	PF00076.22	8e-34	1	2
ENSPNAP00000029039	RRM_1	PF00076.22	8e-34	2	2
ENSPNAP00000029031	RRM_1	PF00076.22	1.1e-29	1	2
ENSPNAP00000029031	RRM_1	PF00076.22	1.1e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000015789	-	1475	XM_017711897	ENSPNAP00000029039	389 (aa)	XP_017567386	UPI0008146A17
ENSPNAT00000015785	-	1295	XM_017711901	ENSPNAP00000009421	329 (aa)	XP_017567390	UPI000814B176
ENSPNAT00000015765	-	945	-	ENSPNAP00000029031	314 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000014957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000014957's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000014957	msi2a	51	39.103	ENSPNAG00000018051	-	79	39.103
ENSPNAG00000014957	msi2a	53	39.881	ENSPNAG00000023333	HNRNPA0	65	40.223
ENSPNAG00000014957	msi2a	64	38.579	ENSPNAG00000021630	-	87	35.955
ENSPNAG00000014957	msi2a	53	43.243	ENSPNAG00000007752	hnrnpa1a	78	41.279
ENSPNAG00000014957	msi2a	53	50.857	ENSPNAG00000016380	hnrnpdl	87	40.441
ENSPNAG00000014957	msi2a	59	45.685	ENSPNAG00000000458	hnrnpaba	65	46.789
ENSPNAG00000014957	msi2a	53	49.425	ENSPNAG00000016368	hnrnpd	62	46.154
ENSPNAG00000014957	msi2a	100	72.619	ENSPNAG00000019337	msi1	100	72.619
ENSPNAG00000014957	msi2a	53	43.605	ENSPNAG00000021384	HNRNPA3	50	43.605
ENSPNAG00000014957	msi2a	76	39.326	ENSPNAG00000011639	dazap1	63	39.130
ENSPNAG00000014957	msi2a	58	47.368	ENSPNAG00000028963	hnrnpabb	77	45.714
ENSPNAG00000014957	msi2a	74	35.802	ENSPNAG00000013057	rbm4.2	56	35.802
ENSPNAG00000014957	msi2a	100	96.815	ENSPNAG00000000844	msi2b	100	96.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000014957	msi2a	100	92.097	ENSG00000153944	MSI2	100	93.617	Homo_sapiens
ENSPNAG00000014957	msi2a	100	94.586	ENSAPOG00000001658	msi2a	100	95.885	Acanthochromis_polyacanthus
ENSPNAG00000014957	msi2a	94	87.385	ENSAMEG00000002697	MSI2	99	89.877	Ailuropoda_melanoleuca
ENSPNAG00000014957	msi2a	100	94.800	ENSACIG00000009475	msi2a	100	89.567	Amphilophus_citrinellus
ENSPNAG00000014957	msi2a	56	86.667	ENSAOCG00000014822	msi2a	69	86.667	Amphiprion_ocellaris
ENSPNAG00000014957	msi2a	100	94.586	ENSAPEG00000007706	msi2a	100	94.586	Amphiprion_percula
ENSPNAG00000014957	msi2a	100	94.586	ENSATEG00000010498	msi2a	100	95.885	Anabas_testudineus
ENSPNAG00000014957	msi2a	94	95.699	ENSATEG00000003301	-	100	95.699	Anabas_testudineus
ENSPNAG00000014957	msi2a	89	96.196	ENSACAG00000005452	MSI2	88	83.662	Anolis_carolinensis
ENSPNAG00000014957	msi2a	100	92.097	ENSANAG00000037827	MSI2	100	93.617	Aotus_nancymaae
ENSPNAG00000014957	msi2a	100	93.949	ENSACLG00000007752	msi2a	100	95.473	Astatotilapia_calliptera
ENSPNAG00000014957	msi2a	100	96.497	ENSAMXG00000010474	msi2b	100	96.497	Astyanax_mexicanus
ENSPNAG00000014957	msi2a	100	98.715	ENSAMXG00000032796	msi2a	100	98.715	Astyanax_mexicanus
ENSPNAG00000014957	msi2a	94	93.182	ENSBTAG00000004406	MSI2	97	94.805	Bos_taurus
ENSPNAG00000014957	msi2a	71	59.127	WBGene00003423	msi-1	79	59.127	Caenorhabditis_elegans
ENSPNAG00000014957	msi2a	100	92.097	ENSCJAG00000013998	MSI2	100	93.617	Callithrix_jacchus
ENSPNAG00000014957	msi2a	94	86.731	ENSCAFG00020025620	MSI2	81	89.389	Canis_lupus_dingo
ENSPNAG00000014957	msi2a	100	91.185	ENSCHIG00000016580	MSI2	100	92.705	Capra_hircus
ENSPNAG00000014957	msi2a	94	88.339	ENSCPOG00000034042	MSI2	99	90.106	Cavia_porcellus
ENSPNAG00000014957	msi2a	100	92.097	ENSCCAG00000033927	MSI2	100	93.617	Cebus_capucinus
ENSPNAG00000014957	msi2a	99	92.920	ENSCATG00000040879	MSI2	100	93.617	Cercocebus_atys
ENSPNAG00000014957	msi2a	100	86.416	ENSCLAG00000014325	MSI2	100	88.761	Chinchilla_lanigera
ENSPNAG00000014957	msi2a	100	92.097	ENSCSAG00000005633	MSI2	100	93.617	Chlorocebus_sabaeus
ENSPNAG00000014957	msi2a	90	67.616	ENSCHOG00000008660	MSI2	83	90.196	Choloepus_hoffmanni
ENSPNAG00000014957	msi2a	94	96.569	ENSCPBG00000009942	MSI2	95	88.806	Chrysemys_picta_bellii
ENSPNAG00000014957	msi2a	87	53.171	ENSCING00000018579	-	97	53.153	Ciona_intestinalis
ENSPNAG00000014957	msi2a	61	68.224	ENSCSAVG00000010397	-	67	68.900	Ciona_savignyi
ENSPNAG00000014957	msi2a	99	92.920	ENSCANG00000036414	MSI2	100	89.846	Colobus_angolensis_palliatus
ENSPNAG00000014957	msi2a	100	91.515	ENSCGRG00001013330	Msi2	100	93.030	Cricetulus_griseus_chok1gshd
ENSPNAG00000014957	msi2a	94	87.117	ENSCGRG00000003141	Msi2	100	89.602	Cricetulus_griseus_crigri
ENSPNAG00000014957	msi2a	57	75.000	ENSCSEG00000013549	msi2a	100	75.000	Cynoglossus_semilaevis
ENSPNAG00000014957	msi2a	82	76.410	ENSCSEG00000013557	msi2a	83	86.154	Cynoglossus_semilaevis
ENSPNAG00000014957	msi2a	100	82.675	ENSCSEG00000003266	-	100	82.371	Cynoglossus_semilaevis
ENSPNAG00000014957	msi2a	100	94.344	ENSCVAG00000017075	msi2a	100	95.885	Cyprinodon_variegatus
ENSPNAG00000014957	msi2a	100	98.805	ENSDARG00000032614	msi2b	100	100.000	Danio_rerio
ENSPNAG00000014957	msi2a	100	91.003	ENSDARG00000033901	msi2a	100	91.003	Danio_rerio
ENSPNAG00000014957	msi2a	94	93.080	ENSDNOG00000014501	MSI2	100	94.810	Dasypus_novemcinctus
ENSPNAG00000014957	msi2a	51	97.345	ENSDORG00000028440	-	100	97.345	Dipodomys_ordii
ENSPNAG00000014957	msi2a	82	80.808	ENSDORG00000005394	Msi2	84	83.838	Dipodomys_ordii
ENSPNAG00000014957	msi2a	97	55.989	FBgn0260943	Rbp6	88	66.667	Drosophila_melanogaster
ENSPNAG00000014957	msi2a	67	74.342	ENSETEG00000012450	-	64	74.342	Echinops_telfairi
ENSPNAG00000014957	msi2a	93	63.578	ENSEBUG00000006732	msi2a	87	63.987	Eptatretus_burgeri
ENSPNAG00000014957	msi2a	94	90.301	ENSEASG00005002965	MSI2	97	83.191	Equus_asinus_asinus
ENSPNAG00000014957	msi2a	94	91.342	ENSECAG00000011435	MSI2	100	86.479	Equus_caballus
ENSPNAG00000014957	msi2a	86	77.165	ENSEEUG00000007810	MSI2	100	79.134	Erinaceus_europaeus
ENSPNAG00000014957	msi2a	100	92.929	ENSELUG00000001361	msi2b	100	92.929	Esox_lucius
ENSPNAG00000014957	msi2a	100	95.860	ENSELUG00000011747	msi2a	100	95.860	Esox_lucius
ENSPNAG00000014957	msi2a	100	92.097	ENSFCAG00000041686	MSI2	100	93.617	Felis_catus
ENSPNAG00000014957	msi2a	57	75.000	ENSFCAG00000033787	-	82	75.000	Felis_catus
ENSPNAG00000014957	msi2a	94	87.385	ENSFDAG00000016118	MSI2	100	89.877	Fukomys_damarensis
ENSPNAG00000014957	msi2a	100	93.949	ENSFHEG00000000084	msi2a	100	93.949	Fundulus_heteroclitus
ENSPNAG00000014957	msi2a	55	93.269	ENSGMOG00000007596	-	100	93.269	Gadus_morhua
ENSPNAG00000014957	msi2a	100	86.705	ENSGALG00000005567	MSI2	100	89.049	Gallus_gallus
ENSPNAG00000014957	msi2a	96	86.230	ENSGAFG00000006974	msi2a	90	95.364	Gambusia_affinis
ENSPNAG00000014957	msi2a	96	90.612	ENSGAGG00000016542	MSI2	100	86.557	Gopherus_agassizii
ENSPNAG00000014957	msi2a	94	93.363	ENSGGOG00000013182	MSI2	100	89.846	Gorilla_gorilla
ENSPNAG00000014957	msi2a	100	93.949	ENSHBUG00000020800	msi2a	100	95.473	Haplochromis_burtoni
ENSPNAG00000014957	msi2a	100	77.457	ENSHGLG00000012444	MSI2	100	79.827	Heterocephalus_glaber_female
ENSPNAG00000014957	msi2a	78	81.643	ENSHGLG00100003744	MSI2	100	85.577	Heterocephalus_glaber_male
ENSPNAG00000014957	msi2a	51	97.368	ENSHGLG00100004028	-	87	97.368	Heterocephalus_glaber_male
ENSPNAG00000014957	msi2a	95	84.436	ENSHCOG00000017241	-	98	72.637	Hippocampus_comes
ENSPNAG00000014957	msi2a	97	95.618	ENSHCOG00000000266	msi2a	100	88.452	Hippocampus_comes
ENSPNAG00000014957	msi2a	100	94.602	ENSIPUG00000003732	msi2b	100	94.859	Ictalurus_punctatus
ENSPNAG00000014957	msi2a	100	95.860	ENSIPUG00000021097	msi2a	100	98.354	Ictalurus_punctatus
ENSPNAG00000014957	msi2a	94	88.339	ENSSTOG00000007884	MSI2	99	90.106	Ictidomys_tridecemlineatus
ENSPNAG00000014957	msi2a	78	82.412	ENSJJAG00000006292	-	100	82.412	Jaculus_jaculus
ENSPNAG00000014957	msi2a	51	97.345	ENSJJAG00000009467	-	100	97.345	Jaculus_jaculus
ENSPNAG00000014957	msi2a	100	93.573	ENSKMAG00000009494	msi2a	100	93.573	Kryptolebias_marmoratus
ENSPNAG00000014957	msi2a	95	79.883	ENSLBEG00000026223	-	100	79.592	Labrus_bergylta
ENSPNAG00000014957	msi2a	100	94.586	ENSLBEG00000007061	msi2a	100	94.586	Labrus_bergylta
ENSPNAG00000014957	msi2a	51	94.118	ENSLACG00000016798	MSI2	98	92.308	Latimeria_chalumnae
ENSPNAG00000014957	msi2a	100	96.658	ENSLOCG00000004675	msi2b	100	96.658	Lepisosteus_oculatus
ENSPNAG00000014957	msi2a	99	93.363	ENSMFAG00000003775	MSI2	100	89.846	Macaca_fascicularis
ENSPNAG00000014957	msi2a	94	93.363	ENSMMUG00000002069	MSI2	100	89.846	Macaca_mulatta
ENSPNAG00000014957	msi2a	100	92.097	ENSMNEG00000045275	MSI2	100	93.617	Macaca_nemestrina
ENSPNAG00000014957	msi2a	99	92.920	ENSMLEG00000033888	MSI2	100	89.846	Mandrillus_leucophaeus
ENSPNAG00000014957	msi2a	96	96.414	ENSMAMG00000002488	-	99	95.364	Mastacembelus_armatus
ENSPNAG00000014957	msi2a	100	95.223	ENSMAMG00000010503	msi2a	100	95.885	Mastacembelus_armatus
ENSPNAG00000014957	msi2a	100	94.225	ENSMZEG00005007676	msi2a	100	94.225	Maylandia_zebra
ENSPNAG00000014957	msi2a	100	85.879	ENSMAUG00000003862	Msi2	100	88.218	Mesocricetus_auratus
ENSPNAG00000014957	msi2a	100	92.097	ENSMICG00000013598	-	100	93.617	Microcebus_murinus
ENSPNAG00000014957	msi2a	100	74.174	ENSMICG00000032913	-	100	75.676	Microcebus_murinus
ENSPNAG00000014957	msi2a	100	86.127	ENSMOCG00000005820	Msi2	100	88.473	Microtus_ochrogaster
ENSPNAG00000014957	msi2a	94	83.548	ENSMMOG00000008348	msi2a	90	94.891	Mola_mola
ENSPNAG00000014957	msi2a	78	82.126	ENSMODG00000014790	MSI2	100	86.058	Monodelphis_domestica
ENSPNAG00000014957	msi2a	100	94.771	ENSMALG00000000071	msi2a	100	95.885	Monopterus_albus
ENSPNAG00000014957	msi2a	100	91.793	MGP_CAROLIEiJ_G0016948	Msi2	100	97.345	Mus_caroli
ENSPNAG00000014957	msi2a	100	91.793	ENSMUSG00000069769	Msi2	100	97.345	Mus_musculus
ENSPNAG00000014957	msi2a	100	91.793	MGP_PahariEiJ_G0018079	Msi2	100	97.345	Mus_pahari
ENSPNAG00000014957	msi2a	100	91.793	MGP_SPRETEiJ_G0017795	Msi2	100	97.345	Mus_spretus
ENSPNAG00000014957	msi2a	94	93.506	ENSMPUG00000015377	MSI2	97	95.130	Mustela_putorius_furo
ENSPNAG00000014957	msi2a	94	93.182	ENSMLUG00000007865	MSI2	97	94.881	Myotis_lucifugus
ENSPNAG00000014957	msi2a	100	86.127	ENSNGAG00000017807	Msi2	100	88.473	Nannospalax_galili
ENSPNAG00000014957	msi2a	100	94.087	ENSNBRG00000014596	msi2a	100	94.087	Neolamprologus_brichardi
ENSPNAG00000014957	msi2a	94	92.920	ENSNLEG00000008059	MSI2	95	95.694	Nomascus_leucogenys
ENSPNAG00000014957	msi2a	67	86.184	ENSOPRG00000000872	-	64	86.184	Ochotona_princeps
ENSPNAG00000014957	msi2a	100	86.416	ENSODEG00000011974	MSI2	100	88.761	Octodon_degus
ENSPNAG00000014957	msi2a	58	95.364	ENSONIG00000001972	msi2a	84	95.364	Oreochromis_niloticus
ENSPNAG00000014957	msi2a	93	93.333	ENSOANG00000005667	MSI2	99	76.690	Ornithorhynchus_anatinus
ENSPNAG00000014957	msi2a	94	93.506	ENSOCUG00000010440	MSI2	97	95.130	Oryctolagus_cuniculus
ENSPNAG00000014957	msi2a	100	94.344	ENSORLG00000009671	msi2a	100	94.344	Oryzias_latipes
ENSPNAG00000014957	msi2a	97	96.016	ENSORLG00020021556	msi2a	100	95.885	Oryzias_latipes_hni
ENSPNAG00000014957	msi2a	100	94.344	ENSORLG00015004592	msi2a	100	94.344	Oryzias_latipes_hsok
ENSPNAG00000014957	msi2a	100	94.344	ENSOMEG00000000146	msi2a	100	95.885	Oryzias_melastigma
ENSPNAG00000014957	msi2a	94	88.961	ENSOGAG00000005621	MSI2	99	90.584	Otolemur_garnettii
ENSPNAG00000014957	msi2a	94	87.346	ENSPPAG00000037697	MSI2	100	89.846	Pan_paniscus
ENSPNAG00000014957	msi2a	94	93.506	ENSPPRG00000001848	MSI2	94	95.130	Panthera_pardus
ENSPNAG00000014957	msi2a	72	76.793	ENSPTIG00000021873	-	90	76.793	Panthera_tigris_altaica
ENSPNAG00000014957	msi2a	94	86.817	ENSPTIG00000021678	MSI2	96	89.423	Panthera_tigris_altaica
ENSPNAG00000014957	msi2a	94	93.363	ENSPTRG00000009437	MSI2	100	89.846	Pan_troglodytes
ENSPNAG00000014957	msi2a	99	93.363	ENSPANG00000022319	MSI2	100	93.617	Papio_anubis
ENSPNAG00000014957	msi2a	96	90.190	ENSPKIG00000007038	-	96	93.416	Paramormyrops_kingsleyae
ENSPNAG00000014957	msi2a	100	96.226	ENSPSIG00000008618	MSI2	100	87.961	Pelodiscus_sinensis
ENSPNAG00000014957	msi2a	100	93.949	ENSPMGG00000005888	msi2a	100	93.949	Periophthalmus_magnuspinnatus
ENSPNAG00000014957	msi2a	51	97.345	ENSPEMG00000021793	-	100	97.345	Peromyscus_maniculatus_bairdii
ENSPNAG00000014957	msi2a	100	84.746	ENSPCIG00000006063	MSI2	100	87.887	Phascolarctos_cinereus
ENSPNAG00000014957	msi2a	57	93.333	ENSPFOG00000019337	MSI2	92	93.333	Poecilia_formosa
ENSPNAG00000014957	msi2a	58	91.608	ENSPLAG00000000436	msi2a	76	92.254	Poecilia_latipinna
ENSPNAG00000014957	msi2a	56	90.625	ENSPMEG00000013247	msi2a	80	90.625	Poecilia_mexicana
ENSPNAG00000014957	msi2a	97	96.016	ENSPREG00000000881	msi2a	99	92.038	Poecilia_reticulata
ENSPNAG00000014957	msi2a	94	89.540	ENSPPYG00000008244	-	100	91.632	Pongo_abelii
ENSPNAG00000014957	msi2a	57	88.235	ENSPCAG00000010552	MSI2	100	65.690	Procavia_capensis
ENSPNAG00000014957	msi2a	52	96.947	ENSPCOG00000019195	-	93	97.692	Propithecus_coquereli
ENSPNAG00000014957	msi2a	94	85.374	ENSPVAG00000017053	MSI2	100	87.075	Pteropus_vampyrus
ENSPNAG00000014957	msi2a	100	94.225	ENSPNYG00000018393	msi2a	100	95.473	Pundamilia_nyererei
ENSPNAG00000014957	msi2a	94	92.832	ENSRNOG00000025338	Msi2	100	94.624	Rattus_norvegicus
ENSPNAG00000014957	msi2a	51	97.368	ENSRROG00000034421	-	92	97.368	Rhinopithecus_roxellana
ENSPNAG00000014957	msi2a	94	93.778	ENSSBOG00000026425	MSI2	100	89.846	Saimiri_boliviensis_boliviensis
ENSPNAG00000014957	msi2a	94	87.963	ENSSHAG00000008672	MSI2	100	90.462	Sarcophilus_harrisii
ENSPNAG00000014957	msi2a	95	85.306	ENSSFOG00015012168	msi2b	100	73.350	Scleropages_formosus
ENSPNAG00000014957	msi2a	94	90.584	ENSSFOG00015021687	-	97	94.144	Scleropages_formosus
ENSPNAG00000014957	msi2a	100	94.268	ENSSMAG00000018484	msi2a	100	95.885	Scophthalmus_maximus
ENSPNAG00000014957	msi2a	100	94.586	ENSSDUG00000014507	msi2a	100	95.885	Seriola_dumerili
ENSPNAG00000014957	msi2a	100	86.136	ENSSDUG00000021968	-	99	94.702	Seriola_dumerili
ENSPNAG00000014957	msi2a	100	94.586	ENSSLDG00000017172	msi2a	100	94.586	Seriola_lalandi_dorsalis
ENSPNAG00000014957	msi2a	58	93.671	ENSSPUG00000000913	-	94	93.671	Sphenodon_punctatus
ENSPNAG00000014957	msi2a	97	96.016	ENSSPAG00000017793	msi2a	95	95.885	Stegastes_partitus
ENSPNAG00000014957	msi2a	100	92.097	ENSSSCG00000038505	MSI2	100	93.617	Sus_scrofa
ENSPNAG00000014957	msi2a	78	81.643	ENSTGUG00000008452	MSI2	100	85.577	Taeniopygia_guttata
ENSPNAG00000014957	msi2a	93	96.016	ENSTRUG00000021248	msi2a	100	88.690	Takifugu_rubripes
ENSPNAG00000014957	msi2a	74	78.099	ENSTBEG00000001241	MSI2	73	78.099	Tupaia_belangeri
ENSPNAG00000014957	msi2a	94	86.611	ENSTTRG00000002189	MSI2	91	97.368	Tursiops_truncatus
ENSPNAG00000014957	msi2a	94	93.506	ENSUAMG00000000700	MSI2	96	96.847	Ursus_americanus
ENSPNAG00000014957	msi2a	90	87.218	ENSUMAG00000000505	MSI2	95	96.373	Ursus_maritimus
ENSPNAG00000014957	msi2a	58	82.873	ENSVPAG00000006837	-	62	82.967	Vicugna_pacos
ENSPNAG00000014957	msi2a	100	93.151	ENSVVUG00000011783	MSI2	100	94.881	Vulpes_vulpes
ENSPNAG00000014957	msi2a	99	93.561	ENSXCOG00000006113	msi2a	100	92.031	Xiphophorus_couchianus
ENSPNAG00000014957	msi2a	97	96.016	ENSXMAG00000000608	msi2a	100	95.885	Xiphophorus_maculatus