EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000015104 (Gene tree)
Gene ID: 108423908
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 55454 bases
Position: chrKV575305.1:1714476-1769929
Accession: 108423908
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000009574	KH_1	PF00013.29	3.4e-54	1	3
ENSPNAP00000009574	KH_1	PF00013.29	3.4e-54	2	3
ENSPNAP00000009574	KH_1	PF00013.29	3.4e-54	3	3
ENSPNAP00000029146	KH_1	PF00013.29	3.4e-54	1	3
ENSPNAP00000029146	KH_1	PF00013.29	3.4e-54	2	3
ENSPNAP00000029146	KH_1	PF00013.29	3.4e-54	3	3
ENSPNAP00000029163	KH_1	PF00013.29	3.4e-54	1	3
ENSPNAP00000029163	KH_1	PF00013.29	3.4e-54	2	3
ENSPNAP00000029163	KH_1	PF00013.29	3.4e-54	3	3
ENSPNAP00000009560	KH_1	PF00013.29	1.1e-43	1	2
ENSPNAP00000009560	KH_1	PF00013.29	1.1e-43	2	2
ENSPNAP00000009574	KH_2	PF07650.17	4e-14	1	1
ENSPNAP00000029146	KH_2	PF07650.17	4e-14	1	1
ENSPNAP00000029163	KH_2	PF07650.17	4e-14	1	1
ENSPNAP00000009560	KH_2	PF07650.17	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000015994	-	4865	XM_017691550	ENSPNAP00000009574	321 (aa)	XP_017547039	UPI000814432B
ENSPNAT00000035373	-	4705	XM_017691553	ENSPNAP00000029163	321 (aa)	XP_017547042	UPI000814432B
ENSPNAT00000015957	-	954	-	ENSPNAP00000009560	317 (aa)	-	-
ENSPNAT00000035371	-	4795	XM_017691555	ENSPNAP00000029146	321 (aa)	XP_017547044	UPI000814432B

Gene Model

Click here to download ENSPNAG00000015104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000015104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000015104	pcbp3	93	35.338	ENSPNAG00000011228	igf2bp2b	60	35.338
ENSPNAG00000015104	pcbp3	94	30.597	ENSPNAG00000013478	fubp3	75	30.667
ENSPNAG00000015104	pcbp3	77	52.857	ENSPNAG00000007549	hnrpkl	55	52.857
ENSPNAG00000015104	pcbp3	97	32.192	ENSPNAG00000015781	igf2bp1	61	32.192
ENSPNAG00000015104	pcbp3	94	71.981	ENSPNAG00000004501	zgc:110045	92	79.227
ENSPNAG00000015104	pcbp3	96	93.506	ENSPNAG00000008541	-	98	93.506
ENSPNAG00000015104	pcbp3	97	80.707	ENSPNAG00000001885	pcbp2	97	80.707
ENSPNAG00000015104	pcbp3	98	75.399	ENSPNAG00000009446	-	98	75.399
ENSPNAG00000015104	pcbp3	94	32.847	ENSPNAG00000000470	igf2bp3	60	32.847
ENSPNAG00000015104	pcbp3	93	40.845	ENSPNAG00000024351	nova1	53	40.845
ENSPNAG00000015104	pcbp3	66	39.706	ENSPNAG00000012026	khsrp	56	39.706
ENSPNAG00000015104	pcbp3	94	64.848	ENSPNAG00000025434	pcbp4	74	63.081
ENSPNAG00000015104	pcbp3	78	50.685	ENSPNAG00000017193	hnrnpk	59	50.685

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000015104	pcbp3	99	93.396	ENSAPOG00000020003	pcbp3	89	93.396	Acanthochromis_polyacanthus
ENSPNAG00000015104	pcbp3	97	98.714	ENSAPOG00000016582	-	100	95.092	Acanthochromis_polyacanthus
ENSPNAG00000015104	pcbp3	99	91.691	ENSAMEG00000001697	-	99	87.500	Ailuropoda_melanoleuca
ENSPNAG00000015104	pcbp3	100	94.207	ENSACIG00000002739	-	100	94.207	Amphilophus_citrinellus
ENSPNAG00000015104	pcbp3	99	86.589	ENSACIG00000010933	pcbp3	98	86.589	Amphilophus_citrinellus
ENSPNAG00000015104	pcbp3	97	97.742	ENSAOCG00000008592	-	98	97.742	Amphiprion_ocellaris
ENSPNAG00000015104	pcbp3	95	94.539	ENSAOCG00000007806	-	100	94.539	Amphiprion_ocellaris
ENSPNAG00000015104	pcbp3	97	90.179	ENSAPEG00000008011	pcbp3	95	90.179	Amphiprion_percula
ENSPNAG00000015104	pcbp3	100	96.885	ENSAPEG00000005209	-	100	96.885	Amphiprion_percula
ENSPNAG00000015104	pcbp3	97	88.589	ENSATEG00000015787	-	100	88.589	Anabas_testudineus
ENSPNAG00000015104	pcbp3	100	96.573	ENSATEG00000009833	-	100	96.573	Anabas_testudineus
ENSPNAG00000015104	pcbp3	99	93.072	ENSAPLG00000002975	-	99	93.072	Anas_platyrhynchos
ENSPNAG00000015104	pcbp3	95	77.841	ENSAPLG00000008951	-	79	77.841	Anas_platyrhynchos
ENSPNAG00000015104	pcbp3	98	83.976	ENSACAG00000009819	-	98	83.976	Anolis_carolinensis
ENSPNAG00000015104	pcbp3	99	85.873	ENSACAG00000004607	-	99	85.873	Anolis_carolinensis
ENSPNAG00000015104	pcbp3	95	97.059	ENSANAG00000030702	-	100	97.059	Aotus_nancymaae
ENSPNAG00000015104	pcbp3	100	98.442	ENSACLG00000003801	-	100	98.442	Astatotilapia_calliptera
ENSPNAG00000015104	pcbp3	99	88.406	ENSACLG00000011835	pcbp3	98	88.406	Astatotilapia_calliptera
ENSPNAG00000015104	pcbp3	97	92.903	ENSAMXG00000013588	-	100	92.903	Astyanax_mexicanus
ENSPNAG00000015104	pcbp3	97	92.515	ENSAMXG00000003440	pcbp3	95	92.515	Astyanax_mexicanus
ENSPNAG00000015104	pcbp3	95	68.712	ENSAMXG00000001760	zgc:110045	72	68.712	Astyanax_mexicanus
ENSPNAG00000015104	pcbp3	92	96.996	ENSCAFG00020019472	-	83	96.996	Canis_lupus_dingo
ENSPNAG00000015104	pcbp3	99	97.484	ENSCSAG00000007440	-	90	97.484	Chlorocebus_sabaeus
ENSPNAG00000015104	pcbp3	95	83.792	ENSCPBG00000000733	-	72	83.792	Chrysemys_picta_bellii
ENSPNAG00000015104	pcbp3	96	97.727	ENSCPBG00000012151	-	99	91.716	Chrysemys_picta_bellii
ENSPNAG00000015104	pcbp3	100	78.674	ENSCSEG00000016984	-	100	78.674	Cynoglossus_semilaevis
ENSPNAG00000015104	pcbp3	97	93.871	ENSCSEG00000000822	pcbp3	99	93.871	Cynoglossus_semilaevis
ENSPNAG00000015104	pcbp3	97	89.881	ENSCVAG00000014482	pcbp3	95	89.881	Cyprinodon_variegatus
ENSPNAG00000015104	pcbp3	100	98.754	ENSCVAG00000005262	-	100	98.754	Cyprinodon_variegatus
ENSPNAG00000015104	pcbp3	100	93.023	ENSDARG00000054378	pcbp3	100	93.023	Danio_rerio
ENSPNAG00000015104	pcbp3	99	83.333	ENSETEG00000015988	-	99	83.333	Echinops_telfairi
ENSPNAG00000015104	pcbp3	95	73.214	ENSEBUG00000016192	pcbp3	99	73.881	Eptatretus_burgeri
ENSPNAG00000015104	pcbp3	92	70.040	ENSEBUG00000005495	pcbp3	74	70.040	Eptatretus_burgeri
ENSPNAG00000015104	pcbp3	98	81.388	ENSEBUG00000007485	-	92	82.192	Eptatretus_burgeri
ENSPNAG00000015104	pcbp3	97	98.392	ENSELUG00000001560	-	86	98.392	Esox_lucius
ENSPNAG00000015104	pcbp3	97	90.208	ENSELUG00000003521	pcbp3	98	88.994	Esox_lucius
ENSPNAG00000015104	pcbp3	99	96.541	ENSFALG00000003949	-	99	96.541	Ficedula_albicollis
ENSPNAG00000015104	pcbp3	95	78.125	ENSFALG00000004411	-	74	78.125	Ficedula_albicollis
ENSPNAG00000015104	pcbp3	98	94.569	ENSFHEG00000016615	pcbp3	96	94.569	Fundulus_heteroclitus
ENSPNAG00000015104	pcbp3	100	96.573	ENSFHEG00000006539	-	100	96.573	Fundulus_heteroclitus
ENSPNAG00000015104	pcbp3	97	81.194	ENSGMOG00000011992	pcbp3	97	81.194	Gadus_morhua
ENSPNAG00000015104	pcbp3	96	70.695	ENSGMOG00000008611	-	100	70.695	Gadus_morhua
ENSPNAG00000015104	pcbp3	99	83.380	ENSGALG00000004394	-	98	89.674	Gallus_gallus
ENSPNAG00000015104	pcbp3	98	82.647	ENSGALG00000013155	-	99	80.539	Gallus_gallus
ENSPNAG00000015104	pcbp3	97	98.071	ENSGAFG00000010274	-	95	98.071	Gambusia_affinis
ENSPNAG00000015104	pcbp3	100	85.174	ENSGAFG00000011430	pcbp3	99	85.174	Gambusia_affinis
ENSPNAG00000015104	pcbp3	100	79.945	ENSGACG00000014955	-	100	79.945	Gasterosteus_aculeatus
ENSPNAG00000015104	pcbp3	100	91.520	ENSGACG00000002266	-	100	91.520	Gasterosteus_aculeatus
ENSPNAG00000015104	pcbp3	79	89.362	ENSGAGG00000006956	-	78	89.362	Gopherus_agassizii
ENSPNAG00000015104	pcbp3	91	89.513	ENSGAGG00000000271	-	100	89.513	Gopherus_agassizii
ENSPNAG00000015104	pcbp3	100	98.442	ENSHBUG00000021782	-	100	98.442	Haplochromis_burtoni
ENSPNAG00000015104	pcbp3	97	94.516	ENSHBUG00000010697	pcbp3	98	94.516	Haplochromis_burtoni
ENSPNAG00000015104	pcbp3	100	93.146	ENSHCOG00000006067	-	100	93.146	Hippocampus_comes
ENSPNAG00000015104	pcbp3	97	90.149	ENSHCOG00000017868	pcbp3	95	90.149	Hippocampus_comes
ENSPNAG00000015104	pcbp3	100	96.885	ENSIPUG00000006238	pcbp3	100	96.885	Ictalurus_punctatus
ENSPNAG00000015104	pcbp3	97	97.106	ENSKMAG00000018530	-	95	97.106	Kryptolebias_marmoratus
ENSPNAG00000015104	pcbp3	97	90.179	ENSKMAG00000003046	pcbp3	95	90.179	Kryptolebias_marmoratus
ENSPNAG00000015104	pcbp3	100	82.515	ENSLBEG00000006542	-	100	82.515	Labrus_bergylta
ENSPNAG00000015104	pcbp3	99	93.711	ENSLBEG00000006201	pcbp3	98	93.711	Labrus_bergylta
ENSPNAG00000015104	pcbp3	96	83.898	ENSLACG00000010386	pcbp3	74	83.898	Latimeria_chalumnae
ENSPNAG00000015104	pcbp3	95	77.937	ENSLACG00000010804	zgc:110045	74	77.937	Latimeria_chalumnae
ENSPNAG00000015104	pcbp3	95	83.180	ENSLOCG00000005058	zgc:110045	80	83.180	Lepisosteus_oculatus
ENSPNAG00000015104	pcbp3	99	92.012	ENSLOCG00000009369	pcbp3	99	92.012	Lepisosteus_oculatus
ENSPNAG00000015104	pcbp3	97	94.839	ENSMAMG00000022336	pcbp3	93	94.839	Mastacembelus_armatus
ENSPNAG00000015104	pcbp3	100	95.327	ENSMAMG00000011620	-	100	95.327	Mastacembelus_armatus
ENSPNAG00000015104	pcbp3	99	86.589	ENSMZEG00005008993	pcbp3	98	87.425	Maylandia_zebra
ENSPNAG00000015104	pcbp3	97	87.888	ENSMZEG00005014882	-	100	84.571	Maylandia_zebra
ENSPNAG00000015104	pcbp3	96	78.090	ENSMGAG00000006794	-	75	78.090	Meleagris_gallopavo
ENSPNAG00000015104	pcbp3	96	81.375	ENSMGAG00000001883	-	96	81.662	Meleagris_gallopavo
ENSPNAG00000015104	pcbp3	97	93.910	ENSMMOG00000000730	pcbp3	88	93.910	Mola_mola
ENSPNAG00000015104	pcbp3	100	95.639	ENSMMOG00000005216	-	100	95.639	Mola_mola
ENSPNAG00000015104	pcbp3	72	78.037	ENSMODG00000027884	-	93	78.037	Monodelphis_domestica
ENSPNAG00000015104	pcbp3	96	88.288	ENSMALG00000000691	pcbp3	95	88.288	Monopterus_albus
ENSPNAG00000015104	pcbp3	99	86.527	ENSMPUG00000001779	-	91	86.527	Mustela_putorius_furo
ENSPNAG00000015104	pcbp3	99	86.297	ENSNBRG00000016409	-	98	86.297	Neolamprologus_brichardi
ENSPNAG00000015104	pcbp3	98	87.613	ENSNBRG00000016714	-	99	87.613	Neolamprologus_brichardi
ENSPNAG00000015104	pcbp3	94	82.609	ENSOPRG00000003431	-	99	82.609	Ochotona_princeps
ENSPNAG00000015104	pcbp3	100	98.442	ENSONIG00000004611	-	100	98.442	Oreochromis_niloticus
ENSPNAG00000015104	pcbp3	97	85.269	ENSONIG00000012122	-	98	85.269	Oreochromis_niloticus
ENSPNAG00000015104	pcbp3	99	96.541	ENSOCUG00000002696	-	90	96.541	Oryctolagus_cuniculus
ENSPNAG00000015104	pcbp3	97	97.742	ENSORLG00000000059	pcbp3	100	97.742	Oryzias_latipes
ENSPNAG00000015104	pcbp3	100	98.442	ENSORLG00000022739	-	100	98.442	Oryzias_latipes
ENSPNAG00000015104	pcbp3	99	96.238	ENSORLG00020012671	pcbp3	99	96.238	Oryzias_latipes_hni
ENSPNAG00000015104	pcbp3	100	98.131	ENSORLG00020006124	-	100	98.131	Oryzias_latipes_hni
ENSPNAG00000015104	pcbp3	99	96.238	ENSORLG00015000429	pcbp3	99	96.238	Oryzias_latipes_hsok
ENSPNAG00000015104	pcbp3	99	96.562	ENSORLG00015008051	-	98	96.562	Oryzias_latipes_hsok
ENSPNAG00000015104	pcbp3	100	97.819	ENSOMEG00000020162	-	100	97.819	Oryzias_melastigma
ENSPNAG00000015104	pcbp3	90	94.828	ENSOMEG00000020811	pcbp3	99	94.828	Oryzias_melastigma
ENSPNAG00000015104	pcbp3	99	84.066	ENSOGAG00000008044	-	99	84.066	Otolemur_garnettii
ENSPNAG00000015104	pcbp3	78	84.211	ENSPKIG00000020913	-	82	84.211	Paramormyrops_kingsleyae
ENSPNAG00000015104	pcbp3	100	95.950	ENSPKIG00000019329	pcbp3	100	95.950	Paramormyrops_kingsleyae
ENSPNAG00000015104	pcbp3	99	83.881	ENSPSIG00000014970	-	99	84.478	Pelodiscus_sinensis
ENSPNAG00000015104	pcbp3	91	81.301	ENSPSIG00000008350	-	68	81.301	Pelodiscus_sinensis
ENSPNAG00000015104	pcbp3	96	90.663	ENSPMGG00000022383	pcbp3	95	90.663	Periophthalmus_magnuspinnatus
ENSPNAG00000015104	pcbp3	78	88.830	ENSPMAG00000004637	-	97	88.830	Petromyzon_marinus
ENSPNAG00000015104	pcbp3	98	73.585	ENSPMAG00000004551	pcbp3	91	73.585	Petromyzon_marinus
ENSPNAG00000015104	pcbp3	99	90.616	ENSPCIG00000028092	-	99	90.616	Phascolarctos_cinereus
ENSPNAG00000015104	pcbp3	99	92.121	ENSPLAG00000004074	-	92	92.121	Poecilia_latipinna
ENSPNAG00000015104	pcbp3	100	80.220	ENSPLAG00000011449	pcbp3	91	80.220	Poecilia_latipinna
ENSPNAG00000015104	pcbp3	96	89.881	ENSPMEG00000021239	pcbp3	95	89.881	Poecilia_mexicana
ENSPNAG00000015104	pcbp3	99	89.213	ENSPMEG00000006653	-	99	89.213	Poecilia_mexicana
ENSPNAG00000015104	pcbp3	100	95.639	ENSPREG00000020585	-	100	95.639	Poecilia_reticulata
ENSPNAG00000015104	pcbp3	97	92.949	ENSPREG00000015736	pcbp3	99	92.949	Poecilia_reticulata
ENSPNAG00000015104	pcbp3	100	95.950	ENSPNYG00000013205	-	100	95.950	Pundamilia_nyererei
ENSPNAG00000015104	pcbp3	97	94.839	ENSPNYG00000012326	pcbp3	95	94.839	Pundamilia_nyererei
ENSPNAG00000015104	pcbp3	99	97.170	ENSRNOG00000001245	Pcbp3	99	97.170	Rattus_norvegicus
ENSPNAG00000015104	pcbp3	99	86.061	ENSRBIG00000028177	-	91	86.061	Rhinopithecus_bieti
ENSPNAG00000015104	pcbp3	99	91.124	ENSSHAG00000007890	-	99	91.124	Sarcophilus_harrisii
ENSPNAG00000015104	pcbp3	94	85.430	ENSSFOG00015007118	-	93	85.430	Scleropages_formosus
ENSPNAG00000015104	pcbp3	97	98.392	ENSSFOG00015010205	pcbp3	95	98.392	Scleropages_formosus
ENSPNAG00000015104	pcbp3	97	90.120	ENSSFOG00015014706	pcbp3	95	90.120	Scleropages_formosus
ENSPNAG00000015104	pcbp3	97	95.161	ENSSMAG00000011929	pcbp3	97	95.161	Scophthalmus_maximus
ENSPNAG00000015104	pcbp3	100	98.131	ENSSMAG00000003135	-	100	98.131	Scophthalmus_maximus
ENSPNAG00000015104	pcbp3	97	92.038	ENSSDUG00000008502	-	95	92.038	Seriola_dumerili
ENSPNAG00000015104	pcbp3	97	87.761	ENSSDUG00000011608	pcbp3	99	87.761	Seriola_dumerili
ENSPNAG00000015104	pcbp3	97	98.714	ENSSLDG00000020161	-	95	98.714	Seriola_lalandi_dorsalis
ENSPNAG00000015104	pcbp3	97	87.761	ENSSLDG00000008518	pcbp3	99	87.761	Seriola_lalandi_dorsalis
ENSPNAG00000015104	pcbp3	92	81.443	ENSSPUG00000013214	-	90	84.080	Sphenodon_punctatus
ENSPNAG00000015104	pcbp3	95	94.881	ENSSPAG00000004190	-	100	94.881	Stegastes_partitus
ENSPNAG00000015104	pcbp3	97	77.246	ENSSPAG00000023341	-	95	77.246	Stegastes_partitus
ENSPNAG00000015104	pcbp3	98	90.127	ENSTGUG00000008158	-	99	90.127	Taeniopygia_guttata
ENSPNAG00000015104	pcbp3	99	88.166	ENSTGUG00000003316	-	99	88.166	Taeniopygia_guttata
ENSPNAG00000015104	pcbp3	90	98.958	ENSTRUG00000006280	-	92	98.958	Takifugu_rubripes
ENSPNAG00000015104	pcbp3	97	91.667	ENSTRUG00000013604	pcbp3	95	91.667	Takifugu_rubripes
ENSPNAG00000015104	pcbp3	99	84.488	ENSTTRG00000015075	-	99	84.488	Tursiops_truncatus
ENSPNAG00000015104	pcbp3	98	89.820	ENSXETG00000011483	pcbp1	99	89.820	Xenopus_tropicalis
ENSPNAG00000015104	pcbp3	90	76.923	ENSXETG00000010491	pcbp2	74	76.923	Xenopus_tropicalis
ENSPNAG00000015104	pcbp3	96	89.881	ENSXCOG00000020481	pcbp3	95	89.881	Xiphophorus_couchianus
ENSPNAG00000015104	pcbp3	97	98.392	ENSXMAG00000028711	-	95	98.392	Xiphophorus_maculatus
ENSPNAG00000015104	pcbp3	97	90.179	ENSXMAG00000008175	pcbp3	95	90.179	Xiphophorus_maculatus