EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000015123 (Gene tree)
Gene ID: 108436278
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 13448 bases
Position: chrKV575490.1:1009093-1022540
Accession: 108436278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000029127	RRM_1	PF00076.22	6.4e-17	1	1
ENSPNAP00000009580	RRM_1	PF00076.22	1.8e-16	1	1
ENSPNAP00000009563	RRM_1	PF00076.22	1.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000015953	-	708	XM_017712671	ENSPNAP00000009563	235 (aa)	XP_017568160	UPI000814330E
ENSPNAT00000015990	-	678	-	ENSPNAP00000009580	225 (aa)	-	-
ENSPNAT00000015925	-	390	-	ENSPNAP00000029127	129 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000015123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000015123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000015123	-	69	42.667	ENSPNAG00000023333	HNRNPA0	57	42.667
ENSPNAG00000015123	-	57	35.135	ENSPNAG00000022784	-	76	35.135
ENSPNAG00000015123	-	95	77.863	ENSPNAG00000010596	rbm38	97	72.247
ENSPNAG00000015123	-	66	34.615	ENSPNAG00000016380	hnrnpdl	52	34.615
ENSPNAG00000015123	-	65	47.368	ENSPNAG00000018051	-	71	47.368
ENSPNAG00000015123	-	53	43.137	ENSPNAG00000028963	hnrnpabb	54	33.824
ENSPNAG00000015123	-	66	41.176	ENSPNAG00000007752	hnrnpa1a	58	43.478
ENSPNAG00000015123	-	91	81.197	ENSPNAG00000018604	rbm24b	98	61.842
ENSPNAG00000015123	-	95	71.756	ENSPNAG00000003816	rbm24a	100	60.581

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000015123	-	87	89.286	ENSG00000132819	RBM38	94	87.288	Homo_sapiens
ENSPNAG00000015123	-	98	82.836	ENSAPOG00000009939	-	100	77.459	Acanthochromis_polyacanthus
ENSPNAG00000015123	-	91	82.203	ENSAPOG00000003301	rbm38	98	62.651	Acanthochromis_polyacanthus
ENSPNAG00000015123	-	91	81.356	ENSACIG00000000010	rbm38	98	62.400	Amphilophus_citrinellus
ENSPNAG00000015123	-	91	92.308	ENSACIG00000012502	-	100	92.373	Amphilophus_citrinellus
ENSPNAG00000015123	-	98	82.836	ENSAOCG00000012559	RBM38	100	77.637	Amphiprion_ocellaris
ENSPNAG00000015123	-	91	82.203	ENSAOCG00000013497	-	98	62.651	Amphiprion_ocellaris
ENSPNAG00000015123	-	91	82.203	ENSAPEG00000013137	rbm38	98	62.651	Amphiprion_percula
ENSPNAG00000015123	-	98	82.836	ENSAPEG00000023581	-	100	77.459	Amphiprion_percula
ENSPNAG00000015123	-	96	84.848	ENSATEG00000016710	-	100	79.098	Anabas_testudineus
ENSPNAG00000015123	-	91	82.203	ENSATEG00000016366	rbm38	99	63.136	Anabas_testudineus
ENSPNAG00000015123	-	96	74.242	ENSACAG00000016238	RBM38	95	61.694	Anolis_carolinensis
ENSPNAG00000015123	-	96	78.030	ENSANAG00000031959	RBM38	82	91.089	Aotus_nancymaae
ENSPNAG00000015123	-	98	82.963	ENSACLG00000019514	-	100	77.049	Astatotilapia_calliptera
ENSPNAG00000015123	-	100	94.468	ENSAMXG00000015601	-	100	94.468	Astyanax_mexicanus
ENSPNAG00000015123	-	86	80.180	ENSAMXG00000038120	rbm38	97	65.948	Astyanax_mexicanus
ENSPNAG00000015123	-	96	76.515	ENSBTAG00000008105	RBM38	91	66.087	Bos_taurus
ENSPNAG00000015123	-	69	82.022	WBGene00006321	sup-12	59	82.022	Caenorhabditis_elegans
ENSPNAG00000015123	-	96	77.273	ENSCJAG00000019139	RBM38	82	91.089	Callithrix_jacchus
ENSPNAG00000015123	-	96	77.273	ENSCAFG00020021943	RBM38	91	69.130	Canis_lupus_dingo
ENSPNAG00000015123	-	96	75.758	ENSCHIG00000002609	RBM38	91	65.652	Capra_hircus
ENSPNAG00000015123	-	96	78.030	ENSCPOG00000012781	RBM38	91	67.391	Cavia_porcellus
ENSPNAG00000015123	-	96	77.273	ENSCCAG00000036872	RBM38	82	91.089	Cebus_capucinus
ENSPNAG00000015123	-	96	78.030	ENSCATG00000032133	RBM38	82	91.089	Cercocebus_atys
ENSPNAG00000015123	-	96	78.030	ENSCLAG00000005906	RBM38	94	66.957	Chinchilla_lanigera
ENSPNAG00000015123	-	96	78.030	ENSCSAG00000015503	RBM38	91	66.522	Chlorocebus_sabaeus
ENSPNAG00000015123	-	96	75.000	ENSCPBG00000024059	RBM38	99	68.018	Chrysemys_picta_bellii
ENSPNAG00000015123	-	75	81.443	ENSCING00000025102	-	96	51.121	Ciona_intestinalis
ENSPNAG00000015123	-	75	81.443	ENSCSAVG00000001132	-	56	62.838	Ciona_savignyi
ENSPNAG00000015123	-	83	66.355	ENSCANG00000030105	-	79	52.212	Colobus_angolensis_palliatus
ENSPNAG00000015123	-	96	77.273	ENSCGRG00001012928	Rbm38	92	65.368	Cricetulus_griseus_chok1gshd
ENSPNAG00000015123	-	88	76.106	ENSCSEG00000020943	rbm38	65	63.131	Cynoglossus_semilaevis
ENSPNAG00000015123	-	97	81.203	ENSCSEG00000004701	-	100	75.000	Cynoglossus_semilaevis
ENSPNAG00000015123	-	88	81.579	ENSCVAG00000015952	rbm38	98	60.800	Cyprinodon_variegatus
ENSPNAG00000015123	-	97	83.459	ENSCVAG00000005472	-	100	77.049	Cyprinodon_variegatus
ENSPNAG00000015123	-	100	75.912	ENSDARG00000058818	rbm38	100	71.186	Danio_rerio
ENSPNAG00000015123	-	96	75.758	ENSDNOG00000032004	RBM38	100	67.401	Dasypus_novemcinctus
ENSPNAG00000015123	-	74	85.263	ENSEBUG00000015164	rbm38	62	82.353	Eptatretus_burgeri
ENSPNAG00000015123	-	96	75.758	ENSECAG00000007700	RBM38	91	66.087	Equus_caballus
ENSPNAG00000015123	-	96	77.273	ENSEEUG00000013489	RBM38	91	66.516	Erinaceus_europaeus
ENSPNAG00000015123	-	99	79.577	ENSELUG00000005849	-	100	77.273	Esox_lucius
ENSPNAG00000015123	-	91	86.441	ENSELUG00000000585	-	99	64.758	Esox_lucius
ENSPNAG00000015123	-	96	77.273	ENSFCAG00000042916	RBM38	82	90.099	Felis_catus
ENSPNAG00000015123	-	96	73.485	ENSFALG00000010805	RBM38	88	74.556	Ficedula_albicollis
ENSPNAG00000015123	-	88	80.702	ENSFHEG00000017748	rbm38	98	59.761	Fundulus_heteroclitus
ENSPNAG00000015123	-	97	82.707	ENSFHEG00000006160	-	100	75.314	Fundulus_heteroclitus
ENSPNAG00000015123	-	99	80.882	ENSGMOG00000016655	-	98	80.435	Gadus_morhua
ENSPNAG00000015123	-	96	73.485	ENSGALG00000026081	RBM38	99	69.369	Gallus_gallus
ENSPNAG00000015123	-	92	80.672	ENSGACG00000015224	rbm38	87	74.586	Gasterosteus_aculeatus
ENSPNAG00000015123	-	98	79.104	ENSGACG00000009873	-	100	74.554	Gasterosteus_aculeatus
ENSPNAG00000015123	-	96	75.000	ENSGAGG00000001187	RBM38	99	68.018	Gopherus_agassizii
ENSPNAG00000015123	-	98	82.963	ENSHBUG00000011778	-	100	78.151	Haplochromis_burtoni
ENSPNAG00000015123	-	91	81.356	ENSHBUG00000012058	rbm38	98	62.000	Haplochromis_burtoni
ENSPNAG00000015123	-	88	88.496	ENSHGLG00000015077	RBM38	91	66.957	Heterocephalus_glaber_female
ENSPNAG00000015123	-	96	82.576	ENSHCOG00000005622	-	57	83.838	Hippocampus_comes
ENSPNAG00000015123	-	87	73.214	ENSHCOG00000019040	rbm38	80	54.040	Hippocampus_comes
ENSPNAG00000015123	-	100	84.810	ENSIPUG00000019349	-	100	81.857	Ictalurus_punctatus
ENSPNAG00000015123	-	78	80.392	ENSKMAG00000012402	rbm38	98	55.794	Kryptolebias_marmoratus
ENSPNAG00000015123	-	98	82.963	ENSLBEG00000016163	RBM38	100	76.891	Labrus_bergylta
ENSPNAG00000015123	-	91	82.203	ENSLBEG00000018878	rbm38	98	62.800	Labrus_bergylta
ENSPNAG00000015123	-	100	77.872	ENSLOCG00000003456	rbm38	100	77.872	Lepisosteus_oculatus
ENSPNAG00000015123	-	96	78.030	ENSMFAG00000043808	RBM38	82	91.089	Macaca_fascicularis
ENSPNAG00000015123	-	96	78.030	ENSMMUG00000031391	RBM38	82	91.089	Macaca_mulatta
ENSPNAG00000015123	-	96	78.030	ENSMNEG00000034683	RBM38	82	91.089	Macaca_nemestrina
ENSPNAG00000015123	-	85	72.727	ENSMLEG00000043261	-	89	72.727	Mandrillus_leucophaeus
ENSPNAG00000015123	-	98	84.328	ENSMAMG00000020499	RBM38	100	77.869	Mastacembelus_armatus
ENSPNAG00000015123	-	91	81.356	ENSMAMG00000024135	rbm38	98	61.600	Mastacembelus_armatus
ENSPNAG00000015123	-	91	81.356	ENSMZEG00005026036	rbm38	98	62.000	Maylandia_zebra
ENSPNAG00000015123	-	98	82.963	ENSMZEG00005000849	-	100	78.151	Maylandia_zebra
ENSPNAG00000015123	-	96	78.030	ENSMAUG00000021211	Rbm38	92	66.968	Mesocricetus_auratus
ENSPNAG00000015123	-	96	78.030	ENSMICG00000038011	RBM38	100	67.249	Microcebus_murinus
ENSPNAG00000015123	-	96	77.273	ENSMOCG00000008715	Rbm38	92	66.516	Microtus_ochrogaster
ENSPNAG00000015123	-	97	84.211	ENSMMOG00000020051	-	100	76.639	Mola_mola
ENSPNAG00000015123	-	97	73.684	ENSMODG00000016458	RBM38	100	65.574	Monodelphis_domestica
ENSPNAG00000015123	-	98	82.222	ENSMALG00000004680	RBM38	72	85.714	Monopterus_albus
ENSPNAG00000015123	-	88	78.947	ENSMALG00000022327	rbm38	71	71.687	Monopterus_albus
ENSPNAG00000015123	-	96	77.273	MGP_CAROLIEiJ_G0024745	Rbm38	92	66.667	Mus_caroli
ENSPNAG00000015123	-	96	77.273	ENSMUSG00000027510	Rbm38	92	66.667	Mus_musculus
ENSPNAG00000015123	-	96	77.273	MGP_PahariEiJ_G0026186	Rbm38	92	66.234	Mus_pahari
ENSPNAG00000015123	-	96	77.273	MGP_SPRETEiJ_G0025665	Rbm38	92	66.234	Mus_spretus
ENSPNAG00000015123	-	96	77.273	ENSMPUG00000006518	RBM38	93	73.016	Mustela_putorius_furo
ENSPNAG00000015123	-	96	75.758	ENSMLUG00000011140	RBM38	100	64.629	Myotis_lucifugus
ENSPNAG00000015123	-	98	82.963	ENSNBRG00000022545	-	100	77.049	Neolamprologus_brichardi
ENSPNAG00000015123	-	91	82.203	ENSNBRG00000022685	rbm38	98	62.400	Neolamprologus_brichardi
ENSPNAG00000015123	-	87	76.786	ENSMEUG00000005475	-	100	70.149	Notamacropus_eugenii
ENSPNAG00000015123	-	96	78.030	ENSODEG00000007980	RBM38	91	66.957	Octodon_degus
ENSPNAG00000015123	-	91	81.356	ENSONIG00000017073	rbm38	100	62.249	Oreochromis_niloticus
ENSPNAG00000015123	-	98	82.963	ENSONIG00000020324	-	100	76.955	Oreochromis_niloticus
ENSPNAG00000015123	-	96	73.485	ENSOANG00000009259	RBM38	81	66.818	Ornithorhynchus_anatinus
ENSPNAG00000015123	-	91	78.814	ENSORLG00000012154	rbm38	98	58.964	Oryzias_latipes
ENSPNAG00000015123	-	98	82.836	ENSORLG00000027180	-	100	75.610	Oryzias_latipes
ENSPNAG00000015123	-	91	79.661	ENSORLG00020017871	rbm38	98	59.363	Oryzias_latipes_hni
ENSPNAG00000015123	-	98	82.836	ENSORLG00020020751	-	100	75.610	Oryzias_latipes_hni
ENSPNAG00000015123	-	91	79.661	ENSORLG00015012606	rbm38	98	59.363	Oryzias_latipes_hsok
ENSPNAG00000015123	-	98	82.836	ENSORLG00015017040	-	100	75.510	Oryzias_latipes_hsok
ENSPNAG00000015123	-	98	82.836	ENSOMEG00000023912	-	100	75.000	Oryzias_melastigma
ENSPNAG00000015123	-	91	79.661	ENSOMEG00000006805	rbm38	96	60.494	Oryzias_melastigma
ENSPNAG00000015123	-	96	78.030	ENSOGAG00000029136	RBM38	90	66.522	Otolemur_garnettii
ENSPNAG00000015123	-	96	77.273	ENSPPRG00000009507	RBM38	82	90.099	Panthera_pardus
ENSPNAG00000015123	-	88	88.496	ENSPTRG00000045845	-	68	85.714	Pan_troglodytes
ENSPNAG00000015123	-	96	78.030	ENSPTRG00000013661	RBM38	82	91.089	Pan_troglodytes
ENSPNAG00000015123	-	74	77.083	ENSPANG00000033127	-	92	52.582	Papio_anubis
ENSPNAG00000015123	-	96	78.030	ENSPANG00000020919	-	82	91.089	Papio_anubis
ENSPNAG00000015123	-	99	76.596	ENSPKIG00000025417	rbm38	100	74.590	Paramormyrops_kingsleyae
ENSPNAG00000015123	-	91	85.470	ENSPKIG00000018122	-	100	85.470	Paramormyrops_kingsleyae
ENSPNAG00000015123	-	97	73.684	ENSPSIG00000011649	RBM38	93	66.812	Pelodiscus_sinensis
ENSPNAG00000015123	-	96	75.373	ENSPMGG00000017094	-	100	70.565	Periophthalmus_magnuspinnatus
ENSPNAG00000015123	-	91	82.203	ENSPMGG00000011343	rbm38	98	59.184	Periophthalmus_magnuspinnatus
ENSPNAG00000015123	-	97	73.684	ENSPCIG00000013648	RBM38	100	64.754	Phascolarctos_cinereus
ENSPNAG00000015123	-	88	82.456	ENSPFOG00000011658	rbm38	98	59.055	Poecilia_formosa
ENSPNAG00000015123	-	97	83.459	ENSPLAG00000002500	-	100	75.610	Poecilia_latipinna
ENSPNAG00000015123	-	88	82.456	ENSPLAG00000005218	rbm38	98	59.055	Poecilia_latipinna
ENSPNAG00000015123	-	88	82.456	ENSPMEG00000015770	rbm38	98	59.055	Poecilia_mexicana
ENSPNAG00000015123	-	88	82.456	ENSPREG00000007398	rbm38	98	59.055	Poecilia_reticulata
ENSPNAG00000015123	-	96	78.788	ENSPCOG00000026201	RBM38	81	91.089	Propithecus_coquereli
ENSPNAG00000015123	-	96	44.397	ENSPVAG00000006457	RBM38	92	44.828	Pteropus_vampyrus
ENSPNAG00000015123	-	91	93.162	ENSPNYG00000019727	-	100	93.220	Pundamilia_nyererei
ENSPNAG00000015123	-	91	80.508	ENSPNYG00000021373	rbm38	98	61.600	Pundamilia_nyererei
ENSPNAG00000015123	-	96	77.273	ENSRNOG00000006420	Rbm38	92	65.801	Rattus_norvegicus
ENSPNAG00000015123	-	91	71.795	ENSRROG00000036388	-	90	55.814	Rhinopithecus_roxellana
ENSPNAG00000015123	-	96	77.273	ENSSBOG00000031053	RBM38	93	91.089	Saimiri_boliviensis_boliviensis
ENSPNAG00000015123	-	96	78.030	ENSSFOG00015004453	rbm38	100	70.000	Scleropages_formosus
ENSPNAG00000015123	-	91	82.203	ENSSDUG00000022611	rbm38	98	63.200	Seriola_dumerili
ENSPNAG00000015123	-	96	84.091	ENSSDUG00000021082	RBM38	100	77.869	Seriola_dumerili
ENSPNAG00000015123	-	91	82.203	ENSSLDG00000010845	rbm38	99	64.103	Seriola_lalandi_dorsalis
ENSPNAG00000015123	-	96	84.091	ENSSLDG00000011778	RBM38	100	78.689	Seriola_lalandi_dorsalis
ENSPNAG00000015123	-	96	83.333	ENSSPAG00000020989	RBM38	100	77.049	Stegastes_partitus
ENSPNAG00000015123	-	92	81.513	ENSSPAG00000011113	rbm38	98	62.800	Stegastes_partitus
ENSPNAG00000015123	-	96	77.273	ENSSSCG00000007504	RBM38	91	67.391	Sus_scrofa
ENSPNAG00000015123	-	91	81.356	ENSTRUG00000024954	rbm38	97	61.224	Takifugu_rubripes
ENSPNAG00000015123	-	96	84.848	ENSTRUG00000019869	-	100	75.510	Takifugu_rubripes
ENSPNAG00000015123	-	97	84.962	ENSTNIG00000007093	-	100	76.889	Tetraodon_nigroviridis
ENSPNAG00000015123	-	96	77.273	ENSUAMG00000019780	RBM38	91	67.826	Ursus_americanus
ENSPNAG00000015123	-	96	77.273	ENSVVUG00000017246	RBM38	91	69.130	Vulpes_vulpes
ENSPNAG00000015123	-	96	74.242	ENSXETG00000011268	rbm38	97	66.816	Xenopus_tropicalis
ENSPNAG00000015123	-	92	87.097	ENSXCOG00000017324	-	68	79.618	Xiphophorus_couchianus
ENSPNAG00000015123	-	88	82.456	ENSXMAG00000023662	rbm38	98	60.400	Xiphophorus_maculatus