EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000015199 (Gene tree)
Gene ID: 108411133
Gene Symbol: -
Alias: -
Full Name: splicing factor%2C arginine/serine-rich 15-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 39592 bases
Position: chrKV576034.1:10922-50513
Accession: 108411133
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000009731	RRM_1	PF00076.22	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000016268	-	4921	XM_017682536	ENSPNAP00000009731	953 (aa)	XP_017538025	UPI000814B13B

Gene Model

Click here to download ENSPNAG00000015199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000015199's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000015199	-	73	45.946	ENSPNAG00000016892	scaf4a	59	44.027

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000015199	-	50	73.913	ENSAPOG00000002946	scaf4a	51	73.913	Acanthochromis_polyacanthus
ENSPNAG00000015199	-	56	75.887	ENSAPOG00000019615	scaf4b	98	75.887	Acanthochromis_polyacanthus
ENSPNAG00000015199	-	56	75.887	ENSAOCG00000010433	scaf4b	98	75.887	Amphiprion_ocellaris
ENSPNAG00000015199	-	50	74.638	ENSAOCG00000000615	scaf4a	51	74.638	Amphiprion_ocellaris
ENSPNAG00000015199	-	50	74.638	ENSAPEG00000021229	scaf4a	51	74.638	Amphiprion_percula
ENSPNAG00000015199	-	56	75.887	ENSAPEG00000010913	scaf4b	98	75.887	Amphiprion_percula
ENSPNAG00000015199	-	64	60.000	ENSATEG00000011758	scaf4b	100	60.000	Anabas_testudineus
ENSPNAG00000015199	-	61	71.975	ENSACLG00000024833	scaf4b	69	71.975	Astatotilapia_calliptera
ENSPNAG00000015199	-	52	60.571	ENSAMXG00000001958	scaf4b	98	66.916	Astyanax_mexicanus
ENSPNAG00000015199	-	90	55.508	ENSCVAG00000009142	scaf4b	100	55.508	Cyprinodon_variegatus
ENSPNAG00000015199	-	60	60.804	ENSDARG00000077093	scaf4a	56	61.307	Danio_rerio
ENSPNAG00000015199	-	73	77.037	ENSFHEG00000007634	scaf4b	97	74.468	Fundulus_heteroclitus
ENSPNAG00000015199	-	80	80.000	ENSKMAG00000005742	scaf4b	98	80.000	Kryptolebias_marmoratus
ENSPNAG00000015199	-	53	74.312	ENSLBEG00000014675	scaf4a	51	74.336	Labrus_bergylta
ENSPNAG00000015199	-	50	74.638	ENSMZEG00005024349	scaf4a	50	74.638	Maylandia_zebra
ENSPNAG00000015199	-	50	74.638	ENSONIG00000004687	scaf4a	50	74.638	Oreochromis_niloticus
ENSPNAG00000015199	-	51	78.676	ENSORLG00000003420	scaf4b	67	78.676	Oryzias_latipes
ENSPNAG00000015199	-	51	78.676	ENSORLG00020013853	scaf4b	67	78.676	Oryzias_latipes_hni
ENSPNAG00000015199	-	80	57.353	ENSPLAG00000004403	-	97	73.050	Poecilia_latipinna
ENSPNAG00000015199	-	55	73.050	ENSPMEG00000006666	-	97	73.050	Poecilia_mexicana
ENSPNAG00000015199	-	79	57.711	ENSPREG00000013510	scaf4b	99	57.711	Poecilia_reticulata
ENSPNAG00000015199	-	61	71.338	ENSPNYG00000010526	scaf4b	69	71.338	Pundamilia_nyererei
ENSPNAG00000015199	-	81	75.177	ENSSMAG00000003738	scaf4b	100	75.177	Scophthalmus_maximus
ENSPNAG00000015199	-	54	74.627	ENSSDUG00000012918	scaf4a	50	74.638	Seriola_dumerili
ENSPNAG00000015199	-	54	74.627	ENSSLDG00000021671	scaf4a	50	74.638	Seriola_lalandi_dorsalis
ENSPNAG00000015199	-	73	71.141	ENSTRUG00000009536	-	50	71.141	Takifugu_rubripes