EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000015419 (Gene tree)
Gene ID: 108423826
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 32572 bases
Position: chrKV575286.1:15096687-15129258
Accession: 108423826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000009877	CPSF_A	PF03178.15	3.6e-99	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000035480	-	4649	XM_017691425	ENSPNAP00000009877	1217 (aa)	XP_017546914	UPI0008146053

Gene Model

Click here to download ENSPNAG00000015419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000015419's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000015419	sf3b3	100	93.509	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSPNAG00000015419	sf3b3	96	97.011	ENSAPOG00000006172	sf3b3	98	97.011	Acanthochromis_polyacanthus
ENSPNAG00000015419	sf3b3	100	93.197	ENSAMEG00000002187	SF3B3	100	93.197	Ailuropoda_melanoleuca
ENSPNAG00000015419	sf3b3	92	94.375	ENSACIG00000016487	sf3b3	100	94.375	Amphilophus_citrinellus
ENSPNAG00000015419	sf3b3	100	97.042	ENSAOCG00000007158	sf3b3	100	97.042	Amphiprion_ocellaris
ENSPNAG00000015419	sf3b3	100	97.042	ENSAPEG00000022786	sf3b3	100	97.042	Amphiprion_percula
ENSPNAG00000015419	sf3b3	100	97.124	ENSATEG00000013708	sf3b3	100	97.124	Anabas_testudineus
ENSPNAG00000015419	sf3b3	81	93.496	ENSAPLG00000004996	SF3B3	99	93.496	Anas_platyrhynchos
ENSPNAG00000015419	sf3b3	100	93.426	ENSACAG00000001817	SF3B3	100	93.426	Anolis_carolinensis
ENSPNAG00000015419	sf3b3	100	93.509	ENSANAG00000028001	SF3B3	100	93.509	Aotus_nancymaae
ENSPNAG00000015419	sf3b3	96	97.096	ENSACLG00000022555	sf3b3	98	97.096	Astatotilapia_calliptera
ENSPNAG00000015419	sf3b3	100	98.521	ENSAMXG00000003410	sf3b3	100	98.521	Astyanax_mexicanus
ENSPNAG00000015419	sf3b3	100	93.509	ENSBTAG00000010627	SF3B3	100	93.509	Bos_taurus
ENSPNAG00000015419	sf3b3	100	60.341	WBGene00019323	teg-4	100	60.341	Caenorhabditis_elegans
ENSPNAG00000015419	sf3b3	100	93.509	ENSCJAG00000014773	SF3B3	99	93.509	Callithrix_jacchus
ENSPNAG00000015419	sf3b3	100	93.426	ENSCAFG00000020151	SF3B3	100	93.426	Canis_familiaris
ENSPNAG00000015419	sf3b3	100	93.426	ENSCAFG00020020912	SF3B3	100	93.426	Canis_lupus_dingo
ENSPNAG00000015419	sf3b3	100	93.426	ENSCHIG00000019822	SF3B3	100	93.426	Capra_hircus
ENSPNAG00000015419	sf3b3	100	93.509	ENSTSYG00000007910	SF3B3	100	93.509	Carlito_syrichta
ENSPNAG00000015419	sf3b3	84	79.405	ENSCAPG00000001484	SF3B3	92	79.405	Cavia_aperea
ENSPNAG00000015419	sf3b3	100	92.194	ENSCPOG00000000586	SF3B3	100	92.194	Cavia_porcellus
ENSPNAG00000015419	sf3b3	100	93.509	ENSCCAG00000017736	SF3B3	100	93.509	Cebus_capucinus
ENSPNAG00000015419	sf3b3	100	93.509	ENSCATG00000036562	SF3B3	100	93.509	Cercocebus_atys
ENSPNAG00000015419	sf3b3	100	93.509	ENSCLAG00000003921	SF3B3	100	93.509	Chinchilla_lanigera
ENSPNAG00000015419	sf3b3	100	93.509	ENSCSAG00000004371	SF3B3	100	93.509	Chlorocebus_sabaeus
ENSPNAG00000015419	sf3b3	90	90.343	ENSCHOG00000001878	SF3B3	90	90.343	Choloepus_hoffmanni
ENSPNAG00000015419	sf3b3	100	93.180	ENSCPBG00000015853	SF3B3	100	93.180	Chrysemys_picta_bellii
ENSPNAG00000015419	sf3b3	100	79.392	ENSCING00000001342	-	100	79.392	Ciona_intestinalis
ENSPNAG00000015419	sf3b3	99	78.325	ENSCSAVG00000011454	-	100	78.325	Ciona_savignyi
ENSPNAG00000015419	sf3b3	100	89.975	ENSCANG00000042920	SF3B3	100	90.468	Colobus_angolensis_palliatus
ENSPNAG00000015419	sf3b3	100	93.426	ENSCGRG00001015908	Sf3b3	100	93.426	Cricetulus_griseus_chok1gshd
ENSPNAG00000015419	sf3b3	100	93.426	ENSCGRG00000010180	Sf3b3	100	93.426	Cricetulus_griseus_crigri
ENSPNAG00000015419	sf3b3	82	95.210	ENSCSEG00000014192	sf3b3	99	95.210	Cynoglossus_semilaevis
ENSPNAG00000015419	sf3b3	100	96.878	ENSCVAG00000010459	sf3b3	100	96.878	Cyprinodon_variegatus
ENSPNAG00000015419	sf3b3	100	97.617	ENSDARG00000103553	sf3b3	100	97.617	Danio_rerio
ENSPNAG00000015419	sf3b3	85	93.057	ENSDNOG00000043626	SF3B3	100	93.057	Dasypus_novemcinctus
ENSPNAG00000015419	sf3b3	100	93.509	ENSDORG00000014176	Sf3b3	100	93.509	Dipodomys_ordii
ENSPNAG00000015419	sf3b3	100	74.878	FBgn0035162	Sf3b3	100	74.878	Drosophila_melanogaster
ENSPNAG00000015419	sf3b3	84	96.624	ENSETEG00000002729	SF3B3	84	96.624	Echinops_telfairi
ENSPNAG00000015419	sf3b3	100	86.278	ENSEBUG00000006117	sf3b3	100	86.278	Eptatretus_burgeri
ENSPNAG00000015419	sf3b3	100	93.426	ENSEASG00005013376	SF3B3	100	93.426	Equus_asinus_asinus
ENSPNAG00000015419	sf3b3	100	93.426	ENSECAG00000014053	SF3B3	100	93.426	Equus_caballus
ENSPNAG00000015419	sf3b3	93	93.333	ENSEEUG00000015611	SF3B3	93	93.333	Erinaceus_europaeus
ENSPNAG00000015419	sf3b3	100	96.475	ENSELUG00000015417	sf3b3	100	96.475	Esox_lucius
ENSPNAG00000015419	sf3b3	100	93.426	ENSFCAG00000009487	SF3B3	100	93.426	Felis_catus
ENSPNAG00000015419	sf3b3	100	92.933	ENSFALG00000007372	SF3B3	100	92.933	Ficedula_albicollis
ENSPNAG00000015419	sf3b3	100	93.509	ENSFDAG00000002608	SF3B3	100	93.509	Fukomys_damarensis
ENSPNAG00000015419	sf3b3	100	97.288	ENSFHEG00000017824	sf3b3	100	97.288	Fundulus_heteroclitus
ENSPNAG00000015419	sf3b3	100	93.514	ENSGMOG00000008139	sf3b3	100	93.514	Gadus_morhua
ENSPNAG00000015419	sf3b3	100	93.344	ENSGALG00000002531	SF3B3	100	93.344	Gallus_gallus
ENSPNAG00000015419	sf3b3	100	96.878	ENSGAFG00000015206	sf3b3	100	96.878	Gambusia_affinis
ENSPNAG00000015419	sf3b3	100	96.962	ENSGACG00000002646	sf3b3	100	96.962	Gasterosteus_aculeatus
ENSPNAG00000015419	sf3b3	96	93.339	ENSGAGG00000006746	SF3B3	97	93.339	Gopherus_agassizii
ENSPNAG00000015419	sf3b3	100	93.509	ENSGGOG00000003246	SF3B3	100	93.509	Gorilla_gorilla
ENSPNAG00000015419	sf3b3	92	89.196	ENSHBUG00000005960	sf3b3	100	90.179	Haplochromis_burtoni
ENSPNAG00000015419	sf3b3	100	93.509	ENSHGLG00000010135	SF3B3	100	93.509	Heterocephalus_glaber_female
ENSPNAG00000015419	sf3b3	100	91.403	ENSHGLG00100011148	SF3B3	100	91.403	Heterocephalus_glaber_male
ENSPNAG00000015419	sf3b3	100	96.878	ENSHCOG00000011981	sf3b3	100	96.878	Hippocampus_comes
ENSPNAG00000015419	sf3b3	100	98.603	ENSIPUG00000020435	sf3b3	100	98.603	Ictalurus_punctatus
ENSPNAG00000015419	sf3b3	100	93.509	ENSSTOG00000007065	SF3B3	100	93.509	Ictidomys_tridecemlineatus
ENSPNAG00000015419	sf3b3	100	93.509	ENSJJAG00000003948	Sf3b3	100	93.509	Jaculus_jaculus
ENSPNAG00000015419	sf3b3	100	95.152	ENSKMAG00000004066	sf3b3	99	97.096	Kryptolebias_marmoratus
ENSPNAG00000015419	sf3b3	100	96.960	ENSLBEG00000018302	sf3b3	100	96.960	Labrus_bergylta
ENSPNAG00000015419	sf3b3	98	90.532	ENSLACG00000012501	SF3B3	99	90.532	Latimeria_chalumnae
ENSPNAG00000015419	sf3b3	100	97.044	ENSLOCG00000007566	sf3b3	100	97.044	Lepisosteus_oculatus
ENSPNAG00000015419	sf3b3	100	93.426	ENSLAFG00000012219	SF3B3	100	93.426	Loxodonta_africana
ENSPNAG00000015419	sf3b3	100	93.509	ENSMFAG00000045487	SF3B3	100	93.509	Macaca_fascicularis
ENSPNAG00000015419	sf3b3	100	93.509	ENSMMUG00000017812	SF3B3	100	93.509	Macaca_mulatta
ENSPNAG00000015419	sf3b3	100	93.509	ENSMNEG00000033385	SF3B3	100	93.509	Macaca_nemestrina
ENSPNAG00000015419	sf3b3	100	89.975	ENSMLEG00000043891	SF3B3	100	89.975	Mandrillus_leucophaeus
ENSPNAG00000015419	sf3b3	100	97.699	ENSMAMG00000016837	sf3b3	100	97.699	Mastacembelus_armatus
ENSPNAG00000015419	sf3b3	100	97.206	ENSMZEG00005010836	sf3b3	100	97.206	Maylandia_zebra
ENSPNAG00000015419	sf3b3	89	94.172	ENSMZEG00005026015	sf3b3	99	94.172	Maylandia_zebra
ENSPNAG00000015419	sf3b3	100	93.344	ENSMGAG00000001597	SF3B3	100	93.344	Meleagris_gallopavo
ENSPNAG00000015419	sf3b3	81	76.404	ENSMAUG00000013618	Sf3b3	95	77.154	Mesocricetus_auratus
ENSPNAG00000015419	sf3b3	100	92.617	ENSMICG00000001363	SF3B3	100	92.617	Microcebus_murinus
ENSPNAG00000015419	sf3b3	100	93.426	ENSMOCG00000006108	Sf3b3	100	93.426	Microtus_ochrogaster
ENSPNAG00000015419	sf3b3	89	94.542	ENSMMOG00000002598	sf3b3	97	94.542	Mola_mola
ENSPNAG00000015419	sf3b3	100	89.327	ENSMODG00000014363	SF3B3	100	89.327	Monodelphis_domestica
ENSPNAG00000015419	sf3b3	100	96.878	ENSMALG00000008014	sf3b3	100	96.878	Monopterus_albus
ENSPNAG00000015419	sf3b3	100	93.426	MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.426	Mus_caroli
ENSPNAG00000015419	sf3b3	100	93.426	ENSMUSG00000033732	Sf3b3	100	93.426	Mus_musculus
ENSPNAG00000015419	sf3b3	100	93.344	MGP_SPRETEiJ_G0032681	Sf3b3	100	93.344	Mus_spretus
ENSPNAG00000015419	sf3b3	100	93.426	ENSMPUG00000010277	SF3B3	100	93.426	Mustela_putorius_furo
ENSPNAG00000015419	sf3b3	100	93.509	ENSMLUG00000014607	SF3B3	100	93.509	Myotis_lucifugus
ENSPNAG00000015419	sf3b3	100	93.509	ENSNGAG00000021903	Sf3b3	100	93.509	Nannospalax_galili
ENSPNAG00000015419	sf3b3	83	94.444	ENSNBRG00000007197	sf3b3	99	94.444	Neolamprologus_brichardi
ENSPNAG00000015419	sf3b3	100	92.036	ENSNLEG00000016127	SF3B3	100	92.036	Nomascus_leucogenys
ENSPNAG00000015419	sf3b3	92	89.678	ENSMEUG00000004479	SF3B3	94	89.678	Notamacropus_eugenii
ENSPNAG00000015419	sf3b3	98	90.277	ENSOPRG00000009847	SF3B3	100	90.277	Ochotona_princeps
ENSPNAG00000015419	sf3b3	100	93.509	ENSODEG00000014154	SF3B3	100	93.509	Octodon_degus
ENSPNAG00000015419	sf3b3	100	97.124	ENSONIG00000011198	sf3b3	100	97.124	Oreochromis_niloticus
ENSPNAG00000015419	sf3b3	100	93.509	ENSOANG00000001161	-	100	93.509	Ornithorhynchus_anatinus
ENSPNAG00000015419	sf3b3	100	91.537	ENSOCUG00000004139	SF3B3	100	91.537	Oryctolagus_cuniculus
ENSPNAG00000015419	sf3b3	100	96.467	ENSORLG00000013472	sf3b3	100	96.467	Oryzias_latipes
ENSPNAG00000015419	sf3b3	100	96.467	ENSORLG00020017473	sf3b3	100	96.467	Oryzias_latipes_hni
ENSPNAG00000015419	sf3b3	100	96.467	ENSORLG00015007710	sf3b3	100	96.467	Oryzias_latipes_hsok
ENSPNAG00000015419	sf3b3	100	96.138	ENSOMEG00000014483	sf3b3	100	96.138	Oryzias_melastigma
ENSPNAG00000015419	sf3b3	100	93.279	ENSOGAG00000016051	SF3B3	100	93.279	Otolemur_garnettii
ENSPNAG00000015419	sf3b3	100	93.197	ENSOARG00000004816	SF3B3	100	93.197	Ovis_aries
ENSPNAG00000015419	sf3b3	100	93.509	ENSPPAG00000026807	SF3B3	100	93.509	Pan_paniscus
ENSPNAG00000015419	sf3b3	100	93.426	ENSPPRG00000001686	SF3B3	100	93.426	Panthera_pardus
ENSPNAG00000015419	sf3b3	89	90.340	ENSPTIG00000020382	SF3B3	100	90.340	Panthera_tigris_altaica
ENSPNAG00000015419	sf3b3	100	93.509	ENSPTRG00000008308	SF3B3	100	93.509	Pan_troglodytes
ENSPNAG00000015419	sf3b3	100	93.509	ENSPANG00000024075	SF3B3	100	93.509	Papio_anubis
ENSPNAG00000015419	sf3b3	100	98.028	ENSPKIG00000002712	sf3b3	100	98.028	Paramormyrops_kingsleyae
ENSPNAG00000015419	sf3b3	89	93.008	ENSPSIG00000002232	SF3B3	100	93.008	Pelodiscus_sinensis
ENSPNAG00000015419	sf3b3	100	93.426	ENSPEMG00000008603	Sf3b3	100	93.426	Peromyscus_maniculatus_bairdii
ENSPNAG00000015419	sf3b3	100	91.208	ENSPMAG00000001793	sf3b3	100	91.208	Petromyzon_marinus
ENSPNAG00000015419	sf3b3	100	93.509	ENSPCIG00000014927	SF3B3	100	93.509	Phascolarctos_cinereus
ENSPNAG00000015419	sf3b3	100	96.960	ENSPFOG00000015516	sf3b3	100	96.960	Poecilia_formosa
ENSPNAG00000015419	sf3b3	100	96.960	ENSPLAG00000014330	sf3b3	100	96.960	Poecilia_latipinna
ENSPNAG00000015419	sf3b3	100	97.042	ENSPMEG00000019856	sf3b3	100	97.042	Poecilia_mexicana
ENSPNAG00000015419	sf3b3	81	96.850	ENSPREG00000019669	sf3b3	97	96.850	Poecilia_reticulata
ENSPNAG00000015419	sf3b3	95	94.776	ENSPPYG00000007539	SF3B3	100	94.776	Pongo_abelii
ENSPNAG00000015419	sf3b3	100	72.884	ENSPCAG00000002623	SF3B3	100	72.884	Procavia_capensis
ENSPNAG00000015419	sf3b3	84	98.131	ENSPCOG00000026582	SF3B3	100	98.131	Propithecus_coquereli
ENSPNAG00000015419	sf3b3	100	93.344	ENSPVAG00000000684	SF3B3	100	93.344	Pteropus_vampyrus
ENSPNAG00000015419	sf3b3	100	97.124	ENSPNYG00000003528	sf3b3	100	97.124	Pundamilia_nyererei
ENSPNAG00000015419	sf3b3	100	93.426	ENSRNOG00000017724	Sf3b3	100	93.426	Rattus_norvegicus
ENSPNAG00000015419	sf3b3	100	93.509	ENSRBIG00000021904	SF3B3	100	93.509	Rhinopithecus_bieti
ENSPNAG00000015419	sf3b3	100	93.509	ENSRROG00000045703	SF3B3	100	93.509	Rhinopithecus_roxellana
ENSPNAG00000015419	sf3b3	100	93.509	ENSSBOG00000029156	SF3B3	100	93.509	Saimiri_boliviensis_boliviensis
ENSPNAG00000015419	sf3b3	100	93.509	ENSSHAG00000000372	SF3B3	100	93.509	Sarcophilus_harrisii
ENSPNAG00000015419	sf3b3	100	98.357	ENSSFOG00015012877	sf3b3	100	98.357	Scleropages_formosus
ENSPNAG00000015419	sf3b3	100	96.385	ENSSMAG00000014386	sf3b3	100	96.385	Scophthalmus_maximus
ENSPNAG00000015419	sf3b3	100	97.535	ENSSDUG00000021201	sf3b3	100	97.535	Seriola_dumerili
ENSPNAG00000015419	sf3b3	100	97.453	ENSSLDG00000017532	sf3b3	100	97.453	Seriola_lalandi_dorsalis
ENSPNAG00000015419	sf3b3	93	93.474	ENSSARG00000006917	SF3B3	93	93.474	Sorex_araneus
ENSPNAG00000015419	sf3b3	100	93.262	ENSSPUG00000006253	SF3B3	100	93.262	Sphenodon_punctatus
ENSPNAG00000015419	sf3b3	100	89.400	ENSSPAG00000003125	sf3b3	100	89.400	Stegastes_partitus
ENSPNAG00000015419	sf3b3	100	93.426	ENSSSCG00000025323	SF3B3	100	93.426	Sus_scrofa
ENSPNAG00000015419	sf3b3	100	93.103	ENSTGUG00000006082	SF3B3	100	93.103	Taeniopygia_guttata
ENSPNAG00000015419	sf3b3	89	96.507	ENSTNIG00000004857	sf3b3	100	96.507	Tetraodon_nigroviridis
ENSPNAG00000015419	sf3b3	93	79.489	ENSTBEG00000002946	SF3B3	100	79.489	Tupaia_belangeri
ENSPNAG00000015419	sf3b3	100	92.605	ENSTTRG00000005855	SF3B3	100	92.605	Tursiops_truncatus
ENSPNAG00000015419	sf3b3	100	93.426	ENSUAMG00000006780	SF3B3	100	93.426	Ursus_americanus
ENSPNAG00000015419	sf3b3	100	93.426	ENSUMAG00000017757	SF3B3	100	93.426	Ursus_maritimus
ENSPNAG00000015419	sf3b3	100	78.472	ENSVPAG00000003202	SF3B3	100	78.472	Vicugna_pacos
ENSPNAG00000015419	sf3b3	100	93.509	ENSVVUG00000017922	SF3B3	100	93.509	Vulpes_vulpes
ENSPNAG00000015419	sf3b3	100	93.262	ENSXETG00000032869	SF3B3	100	93.262	Xenopus_tropicalis
ENSPNAG00000015419	sf3b3	77	97.028	ENSXCOG00000013628	sf3b3	97	97.028	Xiphophorus_couchianus
ENSPNAG00000015419	sf3b3	100	96.960	ENSXMAG00000006334	sf3b3	100	96.960	Xiphophorus_maculatus