EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000015476 (Gene tree)
Gene ID: 108440246
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 17709 bases
Position: chrKV575630.1:110611-128319
Accession: 108440246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000009988	RRM_1	PF00076.22	7.4e-29	1	2
ENSPNAP00000009988	RRM_1	PF00076.22	7.4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000016561	-	4416	XM_017719030	ENSPNAP00000009988	731 (aa)	XP_017574519	UPI0008147F36

Gene Model

Click here to download ENSPNAG00000015476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000015476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000015476	raver1	92	51.786	ENSG00000161847	RAVER1	97	51.436	Homo_sapiens
ENSPNAG00000015476	raver1	98	68.306	ENSAPOG00000017267	raver1	90	70.523	Acanthochromis_polyacanthus
ENSPNAG00000015476	raver1	99	49.491	ENSAMEG00000011738	RAVER1	98	49.415	Ailuropoda_melanoleuca
ENSPNAG00000015476	raver1	98	68.852	ENSAOCG00000005128	raver1	95	71.074	Amphiprion_ocellaris
ENSPNAG00000015476	raver1	98	68.928	ENSAPEG00000010854	raver1	98	71.135	Amphiprion_percula
ENSPNAG00000015476	raver1	98	70.628	ENSATEG00000021004	raver1	98	69.767	Anabas_testudineus
ENSPNAG00000015476	raver1	80	51.669	ENSACAG00000008386	-	91	50.546	Anolis_carolinensis
ENSPNAG00000015476	raver1	68	58.835	ENSANAG00000028226	RAVER1	95	51.300	Aotus_nancymaae
ENSPNAG00000015476	raver1	100	68.759	ENSACLG00000018492	raver1	98	69.241	Astatotilapia_calliptera
ENSPNAG00000015476	raver1	98	79.424	ENSAMXG00000005132	raver1	98	80.384	Astyanax_mexicanus
ENSPNAG00000015476	raver1	61	86.000	ENSBTAG00000015721	RAVER1	97	53.531	Bos_taurus
ENSPNAG00000015476	raver1	75	56.631	ENSCJAG00000005671	RAVER1	98	50.195	Callithrix_jacchus
ENSPNAG00000015476	raver1	94	52.221	ENSCAFG00000017861	RAVER1	96	52.909	Canis_familiaris
ENSPNAG00000015476	raver1	94	52.221	ENSCAFG00020024449	RAVER1	98	52.909	Canis_lupus_dingo
ENSPNAG00000015476	raver1	67	67.164	ENSCHIG00000006718	RAVER1	99	50.999	Capra_hircus
ENSPNAG00000015476	raver1	92	49.322	ENSCAPG00000002269	RAVER1	100	51.836	Cavia_aperea
ENSPNAG00000015476	raver1	72	57.757	ENSCCAG00000031723	RAVER1	97	50.596	Cebus_capucinus
ENSPNAG00000015476	raver1	68	59.491	ENSCATG00000043863	RAVER1	95	51.573	Cercocebus_atys
ENSPNAG00000015476	raver1	91	50.956	ENSCLAG00000009336	RAVER1	96	51.425	Chinchilla_lanigera
ENSPNAG00000015476	raver1	75	56.631	ENSCSAG00000007317	RAVER1	84	50.260	Chlorocebus_sabaeus
ENSPNAG00000015476	raver1	92	51.910	ENSCPBG00000005349	-	97	51.910	Chrysemys_picta_bellii
ENSPNAG00000015476	raver1	67	60.080	ENSCANG00000008337	RAVER1	94	51.872	Colobus_angolensis_palliatus
ENSPNAG00000015476	raver1	91	52.192	ENSCGRG00001013260	-	96	52.740	Cricetulus_griseus_chok1gshd
ENSPNAG00000015476	raver1	91	52.192	ENSCGRG00000015138	-	96	52.740	Cricetulus_griseus_crigri
ENSPNAG00000015476	raver1	98	65.447	ENSCSEG00000021092	raver1	98	66.125	Cynoglossus_semilaevis
ENSPNAG00000015476	raver1	100	66.174	ENSCVAG00000013971	raver1	98	67.077	Cyprinodon_variegatus
ENSPNAG00000015476	raver1	98	76.690	ENSDARG00000052617	raver1	98	76.657	Danio_rerio
ENSPNAG00000015476	raver1	57	62.805	ENSDNOG00000035742	-	61	59.178	Dasypus_novemcinctus
ENSPNAG00000015476	raver1	67	54.224	ENSDORG00000010106	-	96	48.693	Dipodomys_ordii
ENSPNAG00000015476	raver1	56	64.891	ENSEASG00005010544	-	73	64.891	Equus_asinus_asinus
ENSPNAG00000015476	raver1	88	56.036	ENSECAG00000024966	RAVER1	98	49.223	Equus_caballus
ENSPNAG00000015476	raver1	98	70.702	ENSELUG00000023287	raver1	98	71.350	Esox_lucius
ENSPNAG00000015476	raver1	88	56.859	ENSFCAG00000009435	RAVER1	98	50.130	Felis_catus
ENSPNAG00000015476	raver1	91	49.597	ENSFDAG00000015113	RAVER1	96	50.829	Fukomys_damarensis
ENSPNAG00000015476	raver1	93	65.401	ENSGMOG00000003649	raver1	98	64.838	Gadus_morhua
ENSPNAG00000015476	raver1	70	40.078	ENSGALG00000050608	-	54	39.810	Gallus_gallus
ENSPNAG00000015476	raver1	100	66.354	ENSGAFG00000015944	raver1	98	67.258	Gambusia_affinis
ENSPNAG00000015476	raver1	93	63.274	ENSGACG00000013818	raver1	98	64.237	Gasterosteus_aculeatus
ENSPNAG00000015476	raver1	89	59.956	ENSGAGG00000011748	-	96	61.233	Gopherus_agassizii
ENSPNAG00000015476	raver1	92	51.786	ENSGGOG00000006015	RAVER1	95	51.436	Gorilla_gorilla
ENSPNAG00000015476	raver1	100	69.031	ENSHBUG00000021210	raver1	98	69.655	Haplochromis_burtoni
ENSPNAG00000015476	raver1	91	51.950	ENSHGLG00000015460	RAVER1	99	50.727	Heterocephalus_glaber_female
ENSPNAG00000015476	raver1	91	51.950	ENSHGLG00100000812	RAVER1	99	50.727	Heterocephalus_glaber_male
ENSPNAG00000015476	raver1	100	66.397	ENSHCOG00000000449	raver1	96	66.804	Hippocampus_comes
ENSPNAG00000015476	raver1	98	80.249	ENSIPUG00000013153	raver1	98	80.249	Ictalurus_punctatus
ENSPNAG00000015476	raver1	67	59.486	ENSSTOG00000003241	RAVER1	96	51.448	Ictidomys_tridecemlineatus
ENSPNAG00000015476	raver1	94	51.117	ENSJJAG00000018219	-	98	50.868	Jaculus_jaculus
ENSPNAG00000015476	raver1	100	68.280	ENSKMAG00000017355	raver1	97	68.741	Kryptolebias_marmoratus
ENSPNAG00000015476	raver1	92	69.051	ENSLBEG00000008268	raver1	94	69.688	Labrus_bergylta
ENSPNAG00000015476	raver1	74	60.000	ENSLACG00000005809	-	99	50.568	Latimeria_chalumnae
ENSPNAG00000015476	raver1	98	60.925	ENSLOCG00000007500	raver1	98	60.925	Lepisosteus_oculatus
ENSPNAG00000015476	raver1	93	50.670	ENSLAFG00000003664	-	100	51.136	Loxodonta_africana
ENSPNAG00000015476	raver1	75	56.631	ENSMFAG00000037977	RAVER1	98	50.260	Macaca_fascicularis
ENSPNAG00000015476	raver1	75	56.631	ENSMMUG00000014897	RAVER1	98	50.260	Macaca_mulatta
ENSPNAG00000015476	raver1	75	56.631	ENSMNEG00000028390	RAVER1	98	50.260	Macaca_nemestrina
ENSPNAG00000015476	raver1	68	59.064	ENSMLEG00000041959	RAVER1	95	51.296	Mandrillus_leucophaeus
ENSPNAG00000015476	raver1	98	69.672	ENSMAMG00000012059	raver1	98	70.315	Mastacembelus_armatus
ENSPNAG00000015476	raver1	100	68.801	ENSMZEG00005019002	raver1	98	70.548	Maylandia_zebra
ENSPNAG00000015476	raver1	91	52.270	ENSMAUG00000017948	-	96	52.049	Mesocricetus_auratus
ENSPNAG00000015476	raver1	99	50.978	ENSMICG00000010326	RAVER1	99	52.132	Microcebus_murinus
ENSPNAG00000015476	raver1	91	52.459	ENSMOCG00000015553	-	96	52.740	Microtus_ochrogaster
ENSPNAG00000015476	raver1	98	70.999	ENSMMOG00000012093	raver1	98	70.274	Mola_mola
ENSPNAG00000015476	raver1	90	52.000	ENSMODG00000005584	-	87	51.799	Monodelphis_domestica
ENSPNAG00000015476	raver1	100	68.775	ENSMALG00000016569	raver1	98	69.220	Monopterus_albus
ENSPNAG00000015476	raver1	92	51.135	MGP_CAROLIEiJ_G0031860	-	98	51.673	Mus_caroli
ENSPNAG00000015476	raver1	91	51.084	ENSMUSG00000010205	Raver1	98	51.200	Mus_musculus
ENSPNAG00000015476	raver1	91	51.075	MGP_PahariEiJ_G0014726	-	98	50.926	Mus_pahari
ENSPNAG00000015476	raver1	91	51.084	MGP_SPRETEiJ_G0032984	-	98	51.200	Mus_spretus
ENSPNAG00000015476	raver1	91	52.204	ENSMPUG00000006712	RAVER1	98	50.000	Mustela_putorius_furo
ENSPNAG00000015476	raver1	91	51.595	ENSMLUG00000012328	RAVER1	96	53.879	Myotis_lucifugus
ENSPNAG00000015476	raver1	91	51.307	ENSNGAG00000001260	-	96	52.210	Nannospalax_galili
ENSPNAG00000015476	raver1	100	63.833	ENSNBRG00000010139	raver1	98	65.021	Neolamprologus_brichardi
ENSPNAG00000015476	raver1	68	59.302	ENSNLEG00000012181	RAVER1	95	51.223	Nomascus_leucogenys
ENSPNAG00000015476	raver1	85	52.000	ENSMEUG00000003281	-	100	51.497	Notamacropus_eugenii
ENSPNAG00000015476	raver1	66	86.000	ENSODEG00000016260	RAVER1	96	51.852	Octodon_degus
ENSPNAG00000015476	raver1	92	71.512	ENSONIG00000001559	raver1	100	72.555	Oreochromis_niloticus
ENSPNAG00000015476	raver1	99	48.903	ENSOCUG00000020918	RAVER1	96	50.070	Oryctolagus_cuniculus
ENSPNAG00000015476	raver1	100	65.405	ENSORLG00000005458	raver1	98	66.071	Oryzias_latipes
ENSPNAG00000015476	raver1	100	66.081	ENSORLG00020004392	raver1	98	66.758	Oryzias_latipes_hni
ENSPNAG00000015476	raver1	100	65.676	ENSORLG00015017222	raver1	98	66.346	Oryzias_latipes_hsok
ENSPNAG00000015476	raver1	100	64.714	ENSOMEG00000023956	raver1	98	63.712	Oryzias_melastigma
ENSPNAG00000015476	raver1	96	50.993	ENSOGAG00000011071	RAVER1	97	50.667	Otolemur_garnettii
ENSPNAG00000015476	raver1	61	86.000	ENSOARG00000015886	RAVER1	98	48.442	Ovis_aries
ENSPNAG00000015476	raver1	92	51.786	ENSPPAG00000002611	RAVER1	95	51.436	Pan_paniscus
ENSPNAG00000015476	raver1	88	57.040	ENSPPRG00000009912	RAVER1	98	50.130	Panthera_pardus
ENSPNAG00000015476	raver1	92	51.786	ENSPTRG00000010466	RAVER1	95	51.436	Pan_troglodytes
ENSPNAG00000015476	raver1	68	59.491	ENSPANG00000004122	RAVER1	95	51.436	Papio_anubis
ENSPNAG00000015476	raver1	80	60.784	ENSPEMG00000016411	-	96	51.984	Peromyscus_maniculatus_bairdii
ENSPNAG00000015476	raver1	93	53.857	ENSPCIG00000018695	-	98	53.804	Phascolarctos_cinereus
ENSPNAG00000015476	raver1	100	65.782	ENSPFOG00000007016	raver1	98	67.072	Poecilia_formosa
ENSPNAG00000015476	raver1	100	62.735	ENSPLAG00000020793	raver1	96	66.228	Poecilia_latipinna
ENSPNAG00000015476	raver1	100	66.443	ENSPMEG00000011220	raver1	98	67.213	Poecilia_mexicana
ENSPNAG00000015476	raver1	100	64.538	ENSPREG00000006864	raver1	98	65.422	Poecilia_reticulata
ENSPNAG00000015476	raver1	68	59.491	ENSPPYG00000010514	RAVER1	81	52.192	Pongo_abelii
ENSPNAG00000015476	raver1	88	55.046	ENSPCOG00000026605	RAVER1	98	49.096	Propithecus_coquereli
ENSPNAG00000015476	raver1	91	50.752	ENSPVAG00000003689	RAVER1	98	51.009	Pteropus_vampyrus
ENSPNAG00000015476	raver1	100	67.973	ENSPNYG00000013284	raver1	98	69.368	Pundamilia_nyererei
ENSPNAG00000015476	raver1	91	50.951	ENSRNOG00000020710	Raver1	98	51.067	Rattus_norvegicus
ENSPNAG00000015476	raver1	99	51.592	ENSRBIG00000034702	RAVER1	95	52.602	Rhinopithecus_bieti
ENSPNAG00000015476	raver1	99	51.184	ENSRROG00000031186	RAVER1	95	52.602	Rhinopithecus_roxellana
ENSPNAG00000015476	raver1	96	51.340	ENSSBOG00000023423	RAVER1	97	51.560	Saimiri_boliviensis_boliviensis
ENSPNAG00000015476	raver1	85	52.959	ENSSHAG00000008181	-	90	53.040	Sarcophilus_harrisii
ENSPNAG00000015476	raver1	98	70.845	ENSSMAG00000004546	raver1	98	70.123	Scophthalmus_maximus
ENSPNAG00000015476	raver1	98	71.585	ENSSDUG00000021063	raver1	98	72.367	Seriola_dumerili
ENSPNAG00000015476	raver1	98	71.721	ENSSLDG00000014505	raver1	98	72.503	Seriola_lalandi_dorsalis
ENSPNAG00000015476	raver1	98	70.068	ENSSPAG00000000688	raver1	98	72.503	Stegastes_partitus
ENSPNAG00000015476	raver1	74	86.000	ENSSSCG00000013650	-	98	52.186	Sus_scrofa
ENSPNAG00000015476	raver1	98	66.120	ENSTRUG00000025641	raver1	98	65.390	Takifugu_rubripes
ENSPNAG00000015476	raver1	68	58.661	ENSTTRG00000009552	RAVER1	97	51.913	Tursiops_truncatus
ENSPNAG00000015476	raver1	99	50.509	ENSUAMG00000020385	RAVER1	98	50.455	Ursus_americanus
ENSPNAG00000015476	raver1	94	52.086	ENSVVUG00000028976	RAVER1	96	52.770	Vulpes_vulpes
ENSPNAG00000015476	raver1	93	52.174	ENSXETG00000011622	raver1	96	52.699	Xenopus_tropicalis
ENSPNAG00000015476	raver1	100	67.426	ENSXCOG00000016368	raver1	98	68.349	Xiphophorus_couchianus
ENSPNAG00000015476	raver1	100	67.292	ENSXMAG00000000217	raver1	98	68.213	Xiphophorus_maculatus