EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000015533 (Gene tree)
Gene ID: 108428383
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 9036 bases
Position: chrKV575347.1:2842482-2851517
Accession: 108428383
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000029441	MMR_HSR1	PF01926.23	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000016514	-	1914	XM_017699317	ENSPNAP00000029441	637 (aa)	XP_017554806	-

Gene Model

Click here to download ENSPNAG00000015533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000015533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000015533	lsg1	69	31.027	ENSPNAG00000021257	gnl1	50	39.037

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000015533	lsg1	99	65.152	ENSG00000041802	LSG1	98	77.011	Homo_sapiens
ENSPNAG00000015533	lsg1	100	75.387	ENSAPOG00000009694	lsg1	100	75.659	Acanthochromis_polyacanthus
ENSPNAG00000015533	lsg1	99	64.511	ENSAMEG00000009343	LSG1	99	64.768	Ailuropoda_melanoleuca
ENSPNAG00000015533	lsg1	98	75.079	ENSACIG00000012406	lsg1	100	75.349	Amphilophus_citrinellus
ENSPNAG00000015533	lsg1	100	75.000	ENSAOCG00000016066	lsg1	100	75.311	Amphiprion_ocellaris
ENSPNAG00000015533	lsg1	100	75.000	ENSAPEG00000003252	lsg1	100	75.466	Amphiprion_percula
ENSPNAG00000015533	lsg1	98	75.556	ENSATEG00000011794	lsg1	100	75.428	Anabas_testudineus
ENSPNAG00000015533	lsg1	95	62.184	ENSACAG00000004222	LSG1	100	62.145	Anolis_carolinensis
ENSPNAG00000015533	lsg1	99	64.750	ENSANAG00000021153	LSG1	99	65.015	Aotus_nancymaae
ENSPNAG00000015533	lsg1	100	74.238	ENSACLG00000000520	lsg1	100	74.390	Astatotilapia_calliptera
ENSPNAG00000015533	lsg1	100	81.442	ENSAMXG00000008271	lsg1	100	81.902	Astyanax_mexicanus
ENSPNAG00000015533	lsg1	99	64.492	ENSBTAG00000008461	LSG1	99	65.250	Bos_taurus
ENSPNAG00000015533	lsg1	75	45.267	WBGene00016907	C53H9.2	78	51.020	Caenorhabditis_elegans
ENSPNAG00000015533	lsg1	99	64.492	ENSCJAG00000013962	LSG1	99	64.759	Callithrix_jacchus
ENSPNAG00000015533	lsg1	95	65.764	ENSCAFG00000013445	LSG1	100	66.032	Canis_familiaris
ENSPNAG00000015533	lsg1	99	64.608	ENSCAFG00020002216	LSG1	99	65.660	Canis_lupus_dingo
ENSPNAG00000015533	lsg1	100	65.291	ENSCHIG00000015769	LSG1	100	65.396	Capra_hircus
ENSPNAG00000015533	lsg1	99	65.309	ENSTSYG00000001447	LSG1	99	65.269	Carlito_syrichta
ENSPNAG00000015533	lsg1	95	66.775	ENSCAPG00000009856	LSG1	99	67.099	Cavia_aperea
ENSPNAG00000015533	lsg1	99	64.787	ENSCCAG00000035744	LSG1	99	64.750	Cebus_capucinus
ENSPNAG00000015533	lsg1	99	65.554	ENSCATG00000042060	LSG1	99	64.458	Cercocebus_atys
ENSPNAG00000015533	lsg1	99	65.554	ENSCSAG00000008796	LSG1	92	65.813	Chlorocebus_sabaeus
ENSPNAG00000015533	lsg1	100	66.416	ENSCPBG00000015941	LSG1	83	66.817	Chrysemys_picta_bellii
ENSPNAG00000015533	lsg1	69	59.694	ENSCING00000007079	-	94	59.694	Ciona_intestinalis
ENSPNAG00000015533	lsg1	79	55.242	ENSCSAVG00000002514	-	98	55.242	Ciona_savignyi
ENSPNAG00000015533	lsg1	99	65.402	ENSCANG00000030709	LSG1	99	65.663	Colobus_angolensis_palliatus
ENSPNAG00000015533	lsg1	99	65.789	ENSCGRG00001019846	Lsg1	99	65.895	Cricetulus_griseus_chok1gshd
ENSPNAG00000015533	lsg1	99	64.947	ENSCGRG00000014617	Lsg1	99	64.902	Cricetulus_griseus_crigri
ENSPNAG00000015533	lsg1	98	72.170	ENSCSEG00000008522	lsg1	100	71.957	Cynoglossus_semilaevis
ENSPNAG00000015533	lsg1	98	73.810	ENSCVAG00000002484	lsg1	100	74.189	Cyprinodon_variegatus
ENSPNAG00000015533	lsg1	100	79.199	ENSDARG00000015352	lsg1	100	79.969	Danio_rerio
ENSPNAG00000015533	lsg1	99	64.060	ENSDNOG00000006224	LSG1	99	64.060	Dasypus_novemcinctus
ENSPNAG00000015533	lsg1	99	48.382	FBgn0266284	Ns3	99	48.466	Drosophila_melanogaster
ENSPNAG00000015533	lsg1	88	73.333	ENSETEG00000003888	LSG1	89	73.333	Echinops_telfairi
ENSPNAG00000015533	lsg1	89	56.061	ENSEBUG00000003119	lsg1	85	56.061	Eptatretus_burgeri
ENSPNAG00000015533	lsg1	99	65.356	ENSEASG00005000678	LSG1	99	65.766	Equus_asinus_asinus
ENSPNAG00000015533	lsg1	99	65.507	ENSECAG00000017659	LSG1	99	65.916	Equus_caballus
ENSPNAG00000015533	lsg1	87	59.664	ENSEEUG00000015217	LSG1	87	59.664	Erinaceus_europaeus
ENSPNAG00000015533	lsg1	100	72.615	ENSELUG00000023973	lsg1	100	73.231	Esox_lucius
ENSPNAG00000015533	lsg1	100	64.902	ENSFCAG00000024957	LSG1	100	65.158	Felis_catus
ENSPNAG00000015533	lsg1	93	62.338	ENSFALG00000007210	LSG1	94	62.621	Ficedula_albicollis
ENSPNAG00000015533	lsg1	99	65.284	ENSFDAG00000017373	LSG1	99	65.644	Fukomys_damarensis
ENSPNAG00000015533	lsg1	98	71.975	ENSFHEG00000003680	lsg1	100	72.093	Fundulus_heteroclitus
ENSPNAG00000015533	lsg1	98	67.717	ENSGMOG00000015834	lsg1	100	69.646	Gadus_morhua
ENSPNAG00000015533	lsg1	99	61.237	ENSGALG00000007058	LSG1	87	61.458	Gallus_gallus
ENSPNAG00000015533	lsg1	98	72.496	ENSGAFG00000015831	lsg1	100	72.685	Gambusia_affinis
ENSPNAG00000015533	lsg1	98	74.411	ENSGACG00000009323	lsg1	100	74.154	Gasterosteus_aculeatus
ENSPNAG00000015533	lsg1	99	65.658	ENSGGOG00000000520	LSG1	99	65.916	Gorilla_gorilla
ENSPNAG00000015533	lsg1	100	75.772	ENSHBUG00000005659	lsg1	100	75.926	Haplochromis_burtoni
ENSPNAG00000015533	lsg1	99	63.735	ENSHGLG00000017390	LSG1	99	63.678	Heterocephalus_glaber_female
ENSPNAG00000015533	lsg1	99	63.735	ENSHGLG00100018587	LSG1	99	63.678	Heterocephalus_glaber_male
ENSPNAG00000015533	lsg1	98	73.684	ENSHCOG00000016848	lsg1	100	73.561	Hippocampus_comes
ENSPNAG00000015533	lsg1	100	81.056	ENSIPUG00000008631	lsg1	100	81.677	Ictalurus_punctatus
ENSPNAG00000015533	lsg1	76	59.036	ENSSTOG00000010234	LSG1	92	59.325	Ictidomys_tridecemlineatus
ENSPNAG00000015533	lsg1	99	65.224	ENSJJAG00000015513	Lsg1	99	65.485	Jaculus_jaculus
ENSPNAG00000015533	lsg1	98	72.512	ENSKMAG00000009681	lsg1	100	72.601	Kryptolebias_marmoratus
ENSPNAG00000015533	lsg1	98	73.810	ENSLBEG00000024261	lsg1	100	74.224	Labrus_bergylta
ENSPNAG00000015533	lsg1	100	66.616	ENSLACG00000013399	LSG1	100	66.616	Latimeria_chalumnae
ENSPNAG00000015533	lsg1	98	72.956	ENSLOCG00000004918	lsg1	100	73.272	Lepisosteus_oculatus
ENSPNAG00000015533	lsg1	99	64.536	ENSLAFG00000012919	-	99	64.643	Loxodonta_africana
ENSPNAG00000015533	lsg1	99	65.554	ENSMFAG00000039903	LSG1	99	64.458	Macaca_fascicularis
ENSPNAG00000015533	lsg1	99	65.554	ENSMMUG00000010708	LSG1	99	65.813	Macaca_mulatta
ENSPNAG00000015533	lsg1	99	65.554	ENSMNEG00000031538	LSG1	99	64.458	Macaca_nemestrina
ENSPNAG00000015533	lsg1	99	65.402	ENSMLEG00000041184	LSG1	99	65.663	Mandrillus_leucophaeus
ENSPNAG00000015533	lsg1	100	72.981	ENSMAMG00000000470	lsg1	100	72.981	Mastacembelus_armatus
ENSPNAG00000015533	lsg1	100	75.772	ENSMZEG00005017865	lsg1	100	75.926	Maylandia_zebra
ENSPNAG00000015533	lsg1	89	62.057	ENSMGAG00000007050	LSG1	99	62.584	Meleagris_gallopavo
ENSPNAG00000015533	lsg1	94	62.825	ENSMAUG00000016976	Lsg1	96	63.107	Mesocricetus_auratus
ENSPNAG00000015533	lsg1	99	64.036	ENSMICG00000049087	LSG1	99	64.145	Microcebus_murinus
ENSPNAG00000015533	lsg1	99	65.046	ENSMOCG00000022136	Lsg1	99	65.554	Microtus_ochrogaster
ENSPNAG00000015533	lsg1	85	83.333	ENSMMOG00000008884	lsg1	100	71.851	Mola_mola
ENSPNAG00000015533	lsg1	99	57.165	ENSMODG00000019828	LSG1	99	57.165	Monodelphis_domestica
ENSPNAG00000015533	lsg1	100	64.804	MGP_CAROLIEiJ_G0020648	Lsg1	100	65.106	Mus_caroli
ENSPNAG00000015533	lsg1	100	65.244	ENSMUSG00000022538	Lsg1	100	65.653	Mus_musculus
ENSPNAG00000015533	lsg1	99	64.915	MGP_PahariEiJ_G0016352	Lsg1	100	65.204	Mus_pahari
ENSPNAG00000015533	lsg1	100	65.957	MGP_SPRETEiJ_G0021544	Lsg1	100	66.212	Mus_spretus
ENSPNAG00000015533	lsg1	100	65.008	ENSMPUG00000003734	LSG1	100	65.263	Mustela_putorius_furo
ENSPNAG00000015533	lsg1	100	65.008	ENSMLUG00000012548	LSG1	100	65.321	Myotis_lucifugus
ENSPNAG00000015533	lsg1	99	64.580	ENSNGAG00000021872	Lsg1	99	64.688	Nannospalax_galili
ENSPNAG00000015533	lsg1	99	66.516	ENSNLEG00000008293	LSG1	99	66.767	Nomascus_leucogenys
ENSPNAG00000015533	lsg1	67	72.165	ENSMEUG00000009041	-	84	72.165	Notamacropus_eugenii
ENSPNAG00000015533	lsg1	100	75.038	ENSONIG00000002635	lsg1	100	75.191	Oreochromis_niloticus
ENSPNAG00000015533	lsg1	95	67.353	ENSOANG00000012742	LSG1	99	67.353	Ornithorhynchus_anatinus
ENSPNAG00000015533	lsg1	99	66.168	ENSOCUG00000004817	LSG1	99	66.320	Oryctolagus_cuniculus
ENSPNAG00000015533	lsg1	98	71.044	ENSORLG00000007695	lsg1	100	71.139	Oryzias_latipes
ENSPNAG00000015533	lsg1	98	72.496	ENSORLG00020016286	lsg1	100	72.075	Oryzias_latipes_hni
ENSPNAG00000015533	lsg1	98	70.794	ENSORLG00015012025	lsg1	100	71.607	Oryzias_latipes_hsok
ENSPNAG00000015533	lsg1	98	70.300	ENSOMEG00000022379	lsg1	100	70.698	Oryzias_melastigma
ENSPNAG00000015533	lsg1	99	63.893	ENSOGAG00000003475	LSG1	99	64.000	Otolemur_garnettii
ENSPNAG00000015533	lsg1	100	64.804	ENSOARG00000020403	LSG1	100	65.257	Ovis_aries
ENSPNAG00000015533	lsg1	99	65.158	ENSPPAG00000029271	LSG1	99	65.158	Pan_paniscus
ENSPNAG00000015533	lsg1	100	64.072	ENSPPRG00000010281	LSG1	100	64.328	Panthera_pardus
ENSPNAG00000015533	lsg1	100	64.750	ENSPTIG00000010789	LSG1	100	65.008	Panthera_tigris_altaica
ENSPNAG00000015533	lsg1	99	65.008	ENSPTRG00000015760	LSG1	99	65.008	Pan_troglodytes
ENSPNAG00000015533	lsg1	99	65.706	ENSPANG00000018249	LSG1	99	64.608	Papio_anubis
ENSPNAG00000015533	lsg1	99	70.353	ENSPKIG00000002895	lsg1	99	71.319	Paramormyrops_kingsleyae
ENSPNAG00000015533	lsg1	97	62.364	ENSPSIG00000009821	LSG1	100	62.364	Pelodiscus_sinensis
ENSPNAG00000015533	lsg1	95	72.464	ENSPMGG00000000931	lsg1	100	72.464	Periophthalmus_magnuspinnatus
ENSPNAG00000015533	lsg1	99	65.309	ENSPEMG00000012082	-	99	65.309	Peromyscus_maniculatus_bairdii
ENSPNAG00000015533	lsg1	99	61.642	ENSPMAG00000007451	lsg1	99	61.642	Petromyzon_marinus
ENSPNAG00000015533	lsg1	99	67.213	ENSPCIG00000013890	LSG1	80	67.213	Phascolarctos_cinereus
ENSPNAG00000015533	lsg1	98	72.973	ENSPFOG00000021882	lsg1	100	73.023	Poecilia_formosa
ENSPNAG00000015533	lsg1	98	73.003	ENSPLAG00000019536	lsg1	100	73.053	Poecilia_latipinna
ENSPNAG00000015533	lsg1	98	72.108	ENSPMEG00000017281	lsg1	100	72.179	Poecilia_mexicana
ENSPNAG00000015533	lsg1	98	62.893	ENSPREG00000006048	lsg1	100	63.190	Poecilia_reticulata
ENSPNAG00000015533	lsg1	92	64.553	ENSPPYG00000014425	LSG1	100	64.553	Pongo_abelii
ENSPNAG00000015533	lsg1	89	72.000	ENSPCAG00000005511	LSG1	90	72.000	Procavia_capensis
ENSPNAG00000015533	lsg1	99	64.750	ENSPCOG00000012360	LSG1	99	64.857	Propithecus_coquereli
ENSPNAG00000015533	lsg1	100	74.238	ENSPNYG00000021994	lsg1	100	74.390	Pundamilia_nyererei
ENSPNAG00000015533	lsg1	100	63.447	ENSRNOG00000001727	Lsg1	100	65.015	Rattus_norvegicus
ENSPNAG00000015533	lsg1	99	65.658	ENSRBIG00000029053	LSG1	99	65.916	Rhinopithecus_bieti
ENSPNAG00000015533	lsg1	99	65.658	ENSRROG00000037702	LSG1	99	65.916	Rhinopithecus_roxellana
ENSPNAG00000015533	lsg1	78	41.279	YGL099W	LSG1	70	41.860	Saccharomyces_cerevisiae
ENSPNAG00000015533	lsg1	99	65.053	ENSSBOG00000034938	LSG1	99	65.315	Saimiri_boliviensis_boliviensis
ENSPNAG00000015533	lsg1	78	63.218	ENSSHAG00000003487	LSG1	100	63.410	Sarcophilus_harrisii
ENSPNAG00000015533	lsg1	98	73.302	ENSSFOG00015008955	lsg1	100	73.107	Scleropages_formosus
ENSPNAG00000015533	lsg1	98	76.730	ENSSDUG00000004622	lsg1	100	76.579	Seriola_dumerili
ENSPNAG00000015533	lsg1	98	76.032	ENSSLDG00000010869	lsg1	100	75.894	Seriola_lalandi_dorsalis
ENSPNAG00000015533	lsg1	81	66.374	ENSSARG00000012981	LSG1	84	64.384	Sorex_araneus
ENSPNAG00000015533	lsg1	100	66.061	ENSSPUG00000016347	LSG1	100	66.061	Sphenodon_punctatus
ENSPNAG00000015533	lsg1	100	74.143	ENSSPAG00000005508	lsg1	100	74.766	Stegastes_partitus
ENSPNAG00000015533	lsg1	100	64.427	ENSSSCG00000011827	LSG1	100	64.787	Sus_scrofa
ENSPNAG00000015533	lsg1	89	60.661	ENSTGUG00000009068	LSG1	100	60.956	Taeniopygia_guttata
ENSPNAG00000015533	lsg1	98	70.560	ENSTRUG00000017380	lsg1	100	70.515	Takifugu_rubripes
ENSPNAG00000015533	lsg1	98	73.016	ENSTNIG00000015570	lsg1	100	73.220	Tetraodon_nigroviridis
ENSPNAG00000015533	lsg1	91	71.667	ENSTTRG00000000559	LSG1	91	71.667	Tursiops_truncatus
ENSPNAG00000015533	lsg1	100	63.897	ENSUAMG00000012454	LSG1	100	64.103	Ursus_americanus
ENSPNAG00000015533	lsg1	100	63.897	ENSUMAG00000000855	LSG1	100	64.103	Ursus_maritimus
ENSPNAG00000015533	lsg1	95	62.282	ENSVPAG00000012400	LSG1	100	62.282	Vicugna_pacos
ENSPNAG00000015533	lsg1	95	65.760	ENSVVUG00000008956	LSG1	97	65.924	Vulpes_vulpes
ENSPNAG00000015533	lsg1	100	67.123	ENSXETG00000003451	lsg1	100	67.073	Xenopus_tropicalis
ENSPNAG00000015533	lsg1	98	72.843	ENSXCOG00000003239	lsg1	100	73.053	Xiphophorus_couchianus
ENSPNAG00000015533	lsg1	98	71.565	ENSXMAG00000005536	lsg1	100	71.651	Xiphophorus_maculatus