EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000015686 (Gene tree)
Gene ID: 108430781
Gene Symbol: hnrnpc
Alias: fb57h12|fi16b11|wu:fb57h12|wu:fi16b11|zgc:55701
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 11180 bases
Position: chrKV575377.1:2534551-2545730
Accession: 108430781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000029579	RRM_1	PF00076.22	2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000016777	-	1333	XM_017703485	ENSPNAP00000029579	291 (aa)	XP_017558974	-

Gene Model

Click here to download ENSPNAG00000015686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000015686's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000015686	hnrnpc	74	54.386	ENSPNAG00000000498	-	67	55.947
ENSPNAG00000015686	hnrnpc	73	56.000	ENSPNAG00000026098	-	76	53.125
ENSPNAG00000015686	hnrnpc	90	49.627	ENSPNAG00000011812	raly	80	51.948
ENSPNAG00000015686	hnrnpc	89	76.604	ENSPNAG00000019200	zgc:55733	82	77.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000015686	hnrnpc	74	55.909	ENSG00000184672	RALYL	93	77.215	Homo_sapiens
ENSPNAG00000015686	hnrnpc	84	83.267	ENSAPOG00000006963	hnrnpc	79	80.165	Acanthochromis_polyacanthus
ENSPNAG00000015686	hnrnpc	86	80.784	ENSACIG00000016568	-	82	84.793	Amphilophus_citrinellus
ENSPNAG00000015686	hnrnpc	86	78.906	ENSACIG00000000270	-	83	84.332	Amphilophus_citrinellus
ENSPNAG00000015686	hnrnpc	84	82.869	ENSAOCG00000003896	-	79	80.165	Amphiprion_ocellaris
ENSPNAG00000015686	hnrnpc	89	79.623	ENSAOCG00000021616	-	76	82.379	Amphiprion_ocellaris
ENSPNAG00000015686	hnrnpc	89	79.623	ENSAPEG00000019962	-	79	80.894	Amphiprion_percula
ENSPNAG00000015686	hnrnpc	84	82.869	ENSAPEG00000001489	-	79	80.165	Amphiprion_percula
ENSPNAG00000015686	hnrnpc	86	79.608	ENSATEG00000011734	-	79	80.932	Anabas_testudineus
ENSPNAG00000015686	hnrnpc	89	79.775	ENSATEG00000018006	-	79	84.332	Anabas_testudineus
ENSPNAG00000015686	hnrnpc	88	47.857	ENSAPLG00000015574	RALYL	78	53.017	Anas_platyrhynchos
ENSPNAG00000015686	hnrnpc	74	52.586	ENSACAG00000028464	RALYL	77	52.586	Anolis_carolinensis
ENSPNAG00000015686	hnrnpc	74	56.364	ENSANAG00000023383	RALYL	76	55.251	Aotus_nancymaae
ENSPNAG00000015686	hnrnpc	84	81.275	ENSACLG00000000995	-	81	82.727	Astatotilapia_calliptera
ENSPNAG00000015686	hnrnpc	89	78.652	ENSACLG00000005707	-	83	80.242	Astatotilapia_calliptera
ENSPNAG00000015686	hnrnpc	84	80.876	ENSACLG00000013636	-	81	83.128	Astatotilapia_calliptera
ENSPNAG00000015686	hnrnpc	89	80.620	ENSAMXG00000034915	zgc:55733	86	77.869	Astyanax_mexicanus
ENSPNAG00000015686	hnrnpc	86	84.462	ENSAMXG00000042946	hnrnpc	97	90.052	Astyanax_mexicanus
ENSPNAG00000015686	hnrnpc	74	55.909	ENSCJAG00000000402	RALYL	76	54.795	Callithrix_jacchus
ENSPNAG00000015686	hnrnpc	74	54.545	ENSCPOG00000012314	RALYL	77	53.680	Cavia_porcellus
ENSPNAG00000015686	hnrnpc	74	55.909	ENSCCAG00000025003	RALYL	77	77.215	Cebus_capucinus
ENSPNAG00000015686	hnrnpc	74	55.909	ENSCATG00000042145	RALYL	76	55.251	Cercocebus_atys
ENSPNAG00000015686	hnrnpc	74	54.545	ENSCLAG00000005228	RALYL	77	53.680	Chinchilla_lanigera
ENSPNAG00000015686	hnrnpc	72	53.333	ENSCHOG00000013228	RALYL	75	49.784	Choloepus_hoffmanni
ENSPNAG00000015686	hnrnpc	74	55.909	ENSCANG00000039144	RALYL	76	55.251	Colobus_angolensis_palliatus
ENSPNAG00000015686	hnrnpc	74	53.448	ENSCGRG00001009241	Ralyl	77	53.017	Cricetulus_griseus_chok1gshd
ENSPNAG00000015686	hnrnpc	74	74.771	ENSCSEG00000019769	-	74	74.312	Cynoglossus_semilaevis
ENSPNAG00000015686	hnrnpc	88	76.834	ENSCSEG00000021349	-	82	76.628	Cynoglossus_semilaevis
ENSPNAG00000015686	hnrnpc	89	64.552	ENSCVAG00000002797	-	80	63.445	Cyprinodon_variegatus
ENSPNAG00000015686	hnrnpc	89	79.699	ENSCVAG00000016981	-	76	77.823	Cyprinodon_variegatus
ENSPNAG00000015686	hnrnpc	89	81.395	ENSDARG00000103845	zgc:55733	89	81.092	Danio_rerio
ENSPNAG00000015686	hnrnpc	89	83.525	ENSDARG00000053810	hnrnpc	82	82.375	Danio_rerio
ENSPNAG00000015686	hnrnpc	74	54.310	ENSDORG00000003721	Ralyl	77	54.545	Dipodomys_ordii
ENSPNAG00000015686	hnrnpc	56	57.803	ENSETEG00000014028	RALYL	82	59.877	Echinops_telfairi
ENSPNAG00000015686	hnrnpc	78	50.000	ENSEBUG00000006049	RALYL	81	47.458	Eptatretus_burgeri
ENSPNAG00000015686	hnrnpc	92	39.209	ENSEBUG00000012363	hnrnpc	67	45.415	Eptatretus_burgeri
ENSPNAG00000015686	hnrnpc	76	53.586	ENSEEUG00000007202	RALYL	80	53.390	Erinaceus_europaeus
ENSPNAG00000015686	hnrnpc	89	80.074	ENSELUG00000004132	-	84	80.321	Esox_lucius
ENSPNAG00000015686	hnrnpc	85	76.604	ENSELUG00000007714	-	99	66.078	Esox_lucius
ENSPNAG00000015686	hnrnpc	72	56.221	ENSFALG00000008647	RALYL	97	55.607	Ficedula_albicollis
ENSPNAG00000015686	hnrnpc	88	76.136	ENSFHEG00000003605	-	81	77.016	Fundulus_heteroclitus
ENSPNAG00000015686	hnrnpc	86	77.778	ENSFHEG00000007278	-	77	75.794	Fundulus_heteroclitus
ENSPNAG00000015686	hnrnpc	74	55.856	ENSGALG00000036938	RALYL	79	52.321	Gallus_gallus
ENSPNAG00000015686	hnrnpc	88	75.665	ENSGAFG00000020486	-	81	81.106	Gambusia_affinis
ENSPNAG00000015686	hnrnpc	86	78.431	ENSGAFG00000020992	-	78	82.949	Gambusia_affinis
ENSPNAG00000015686	hnrnpc	74	73.853	ENSGACG00000018932	-	87	71.759	Gasterosteus_aculeatus
ENSPNAG00000015686	hnrnpc	89	78.277	ENSGACG00000017772	-	91	78.903	Gasterosteus_aculeatus
ENSPNAG00000015686	hnrnpc	74	55.909	ENSGGOG00000000841	RALYL	76	55.251	Gorilla_gorilla
ENSPNAG00000015686	hnrnpc	84	81.673	ENSHBUG00000018342	-	77	85.593	Haplochromis_burtoni
ENSPNAG00000015686	hnrnpc	89	79.026	ENSHBUG00000010527	-	78	80.645	Haplochromis_burtoni
ENSPNAG00000015686	hnrnpc	74	54.113	ENSHGLG00000004866	RALYL	77	53.247	Heterocephalus_glaber_female
ENSPNAG00000015686	hnrnpc	74	54.113	ENSHGLG00100017480	RALYL	77	53.247	Heterocephalus_glaber_male
ENSPNAG00000015686	hnrnpc	87	77.941	ENSHCOG00000012333	hnrnpc	84	75.969	Hippocampus_comes
ENSPNAG00000015686	hnrnpc	89	80.233	ENSIPUG00000008666	zgc:55733	99	75.758	Ictalurus_punctatus
ENSPNAG00000015686	hnrnpc	85	91.935	ENSIPUG00000011271	hnrnpc	97	90.625	Ictalurus_punctatus
ENSPNAG00000015686	hnrnpc	74	53.879	ENSSTOG00000012583	RALYL	79	53.448	Ictidomys_tridecemlineatus
ENSPNAG00000015686	hnrnpc	89	78.868	ENSKMAG00000011170	-	78	80.335	Kryptolebias_marmoratus
ENSPNAG00000015686	hnrnpc	89	78.571	ENSKMAG00000018265	-	77	79.757	Kryptolebias_marmoratus
ENSPNAG00000015686	hnrnpc	91	73.498	ENSLBEG00000024418	-	81	73.984	Labrus_bergylta
ENSPNAG00000015686	hnrnpc	88	77.947	ENSLBEG00000006979	-	79	78.879	Labrus_bergylta
ENSPNAG00000015686	hnrnpc	88	79.468	ENSLBEG00000006193	-	78	81.707	Labrus_bergylta
ENSPNAG00000015686	hnrnpc	88	69.925	ENSLOCG00000002560	hnrnpc	84	72.581	Lepisosteus_oculatus
ENSPNAG00000015686	hnrnpc	74	55.909	ENSMNEG00000033288	RALYL	76	55.251	Macaca_nemestrina
ENSPNAG00000015686	hnrnpc	74	55.909	ENSMLEG00000038284	RALYL	76	55.251	Mandrillus_leucophaeus
ENSPNAG00000015686	hnrnpc	89	79.026	ENSMAMG00000008033	-	82	80.085	Mastacembelus_armatus
ENSPNAG00000015686	hnrnpc	86	82.400	ENSMAMG00000012236	-	78	83.333	Mastacembelus_armatus
ENSPNAG00000015686	hnrnpc	84	81.275	ENSMZEG00005020460	-	77	85.169	Maylandia_zebra
ENSPNAG00000015686	hnrnpc	89	78.652	ENSMZEG00005024249	-	78	80.242	Maylandia_zebra
ENSPNAG00000015686	hnrnpc	74	53.448	ENSMAUG00000015149	Ralyl	77	53.017	Mesocricetus_auratus
ENSPNAG00000015686	hnrnpc	74	57.466	ENSMICG00000005558	RALYL	80	77.215	Microcebus_murinus
ENSPNAG00000015686	hnrnpc	74	53.448	ENSMOCG00000017371	Ralyl	77	53.017	Microtus_ochrogaster
ENSPNAG00000015686	hnrnpc	84	81.855	ENSMMOG00000019520	-	83	85.047	Mola_mola
ENSPNAG00000015686	hnrnpc	88	79.771	ENSMMOG00000021465	-	85	83.128	Mola_mola
ENSPNAG00000015686	hnrnpc	86	74.800	ENSMALG00000007520	-	80	76.991	Monopterus_albus
ENSPNAG00000015686	hnrnpc	89	80.228	ENSMALG00000014623	-	78	81.557	Monopterus_albus
ENSPNAG00000015686	hnrnpc	74	53.017	ENSMUSG00000039717	Ralyl	93	75.949	Mus_musculus
ENSPNAG00000015686	hnrnpc	74	54.077	ENSMPUG00000010724	RALYL	77	52.586	Mustela_putorius_furo
ENSPNAG00000015686	hnrnpc	74	53.448	ENSNGAG00000013375	Ralyl	77	53.680	Nannospalax_galili
ENSPNAG00000015686	hnrnpc	89	79.026	ENSNBRG00000015676	-	79	81.858	Neolamprologus_brichardi
ENSPNAG00000015686	hnrnpc	86	82.031	ENSNBRG00000004912	-	93	80.000	Neolamprologus_brichardi
ENSPNAG00000015686	hnrnpc	74	55.909	ENSNLEG00000002702	RALYL	73	55.251	Nomascus_leucogenys
ENSPNAG00000015686	hnrnpc	61	51.042	ENSOPRG00000013650	-	98	45.960	Ochotona_princeps
ENSPNAG00000015686	hnrnpc	88	48.736	ENSODEG00000001012	RALYL	79	52.966	Octodon_degus
ENSPNAG00000015686	hnrnpc	89	79.401	ENSONIG00000018350	-	78	80.645	Oreochromis_niloticus
ENSPNAG00000015686	hnrnpc	84	81.673	ENSONIG00000007859	-	87	77.381	Oreochromis_niloticus
ENSPNAG00000015686	hnrnpc	89	76.190	ENSORLG00000003144	-	77	76.863	Oryzias_latipes
ENSPNAG00000015686	hnrnpc	84	70.751	ENSORLG00000009999	-	77	70.464	Oryzias_latipes
ENSPNAG00000015686	hnrnpc	84	70.751	ENSORLG00020018228	hnrnpc	79	68.852	Oryzias_latipes_hni
ENSPNAG00000015686	hnrnpc	84	70.751	ENSORLG00015019755	-	77	70.464	Oryzias_latipes_hsok
ENSPNAG00000015686	hnrnpc	89	76.190	ENSORLG00015009460	-	77	76.863	Oryzias_latipes_hsok
ENSPNAG00000015686	hnrnpc	89	78.571	ENSOMEG00000022665	-	77	79.435	Oryzias_melastigma
ENSPNAG00000015686	hnrnpc	84	71.146	ENSOMEG00000020488	-	77	70.886	Oryzias_melastigma
ENSPNAG00000015686	hnrnpc	74	55.909	ENSPPAG00000038705	RALYL	76	55.251	Pan_paniscus
ENSPNAG00000015686	hnrnpc	74	57.207	ENSPPRG00000018612	RALYL	77	55.656	Panthera_pardus
ENSPNAG00000015686	hnrnpc	74	57.207	ENSPTIG00000020331	RALYL	77	55.656	Panthera_tigris_altaica
ENSPNAG00000015686	hnrnpc	74	55.909	ENSPTRG00000020381	RALYL	76	55.251	Pan_troglodytes
ENSPNAG00000015686	hnrnpc	74	55.909	ENSPANG00000029305	RALYL	76	55.251	Papio_anubis
ENSPNAG00000015686	hnrnpc	87	78.652	ENSPKIG00000022837	-	76	81.557	Paramormyrops_kingsleyae
ENSPNAG00000015686	hnrnpc	89	79.412	ENSPKIG00000008592	-	78	81.928	Paramormyrops_kingsleyae
ENSPNAG00000015686	hnrnpc	74	53.448	ENSPSIG00000011135	RALYL	79	52.321	Pelodiscus_sinensis
ENSPNAG00000015686	hnrnpc	70	79.024	ENSPMGG00000017774	-	90	63.679	Periophthalmus_magnuspinnatus
ENSPNAG00000015686	hnrnpc	75	86.758	ENSPMGG00000013144	-	83	86.758	Periophthalmus_magnuspinnatus
ENSPNAG00000015686	hnrnpc	74	53.448	ENSPEMG00000016447	Ralyl	77	53.017	Peromyscus_maniculatus_bairdii
ENSPNAG00000015686	hnrnpc	72	53.982	ENSPMAG00000002407	RALYL	97	52.402	Petromyzon_marinus
ENSPNAG00000015686	hnrnpc	88	76.046	ENSPFOG00000001583	-	81	75.000	Poecilia_formosa
ENSPNAG00000015686	hnrnpc	89	77.736	ENSPFOG00000002643	-	77	78.947	Poecilia_formosa
ENSPNAG00000015686	hnrnpc	88	75.285	ENSPLAG00000015305	-	81	74.194	Poecilia_latipinna
ENSPNAG00000015686	hnrnpc	89	77.736	ENSPLAG00000000061	-	76	78.947	Poecilia_latipinna
ENSPNAG00000015686	hnrnpc	89	78.113	ENSPMEG00000016524	-	77	80.567	Poecilia_mexicana
ENSPNAG00000015686	hnrnpc	88	76.426	ENSPMEG00000004802	-	79	75.410	Poecilia_mexicana
ENSPNAG00000015686	hnrnpc	84	75.397	ENSPREG00000007928	-	81	76.210	Poecilia_reticulata
ENSPNAG00000015686	hnrnpc	89	76.981	ENSPREG00000001852	-	82	78.138	Poecilia_reticulata
ENSPNAG00000015686	hnrnpc	96	46.488	ENSPVAG00000010821	RALYL	79	52.766	Pteropus_vampyrus
ENSPNAG00000015686	hnrnpc	89	79.026	ENSPNYG00000003747	-	83	80.645	Pundamilia_nyererei
ENSPNAG00000015686	hnrnpc	86	81.250	ENSPNYG00000020293	-	87	78.125	Pundamilia_nyererei
ENSPNAG00000015686	hnrnpc	74	55.909	ENSRROG00000023925	RALYL	82	75.309	Rhinopithecus_roxellana
ENSPNAG00000015686	hnrnpc	85	79.771	ENSSFOG00015012924	-	80	96.203	Scleropages_formosus
ENSPNAG00000015686	hnrnpc	89	74.539	ENSSFOG00015012015	-	82	78.605	Scleropages_formosus
ENSPNAG00000015686	hnrnpc	84	76.113	ENSSMAG00000013592	-	79	78.862	Scophthalmus_maximus
ENSPNAG00000015686	hnrnpc	87	77.186	ENSSMAG00000011147	-	79	82.870	Scophthalmus_maximus
ENSPNAG00000015686	hnrnpc	88	81.226	ENSSDUG00000001723	-	80	80.081	Seriola_dumerili
ENSPNAG00000015686	hnrnpc	89	81.818	ENSSDUG00000006730	-	78	84.082	Seriola_dumerili
ENSPNAG00000015686	hnrnpc	88	81.609	ENSSLDG00000007454	-	81	80.488	Seriola_lalandi_dorsalis
ENSPNAG00000015686	hnrnpc	89	81.818	ENSSLDG00000007474	-	85	84.082	Seriola_lalandi_dorsalis
ENSPNAG00000015686	hnrnpc	89	79.623	ENSSPAG00000013996	-	78	81.301	Stegastes_partitus
ENSPNAG00000015686	hnrnpc	88	79.693	ENSSPAG00000023204	-	79	80.992	Stegastes_partitus
ENSPNAG00000015686	hnrnpc	74	53.879	ENSTGUG00000011689	RALYL	79	53.448	Taeniopygia_guttata
ENSPNAG00000015686	hnrnpc	86	73.622	ENSTRUG00000020158	-	77	78.298	Takifugu_rubripes
ENSPNAG00000015686	hnrnpc	85	73.810	ENSTNIG00000000334	-	87	74.167	Tetraodon_nigroviridis
ENSPNAG00000015686	hnrnpc	86	68.321	ENSTNIG00000007427	-	78	73.859	Tetraodon_nigroviridis
ENSPNAG00000015686	hnrnpc	74	47.414	ENSTBEG00000005551	RALYL	89	46.983	Tupaia_belangeri
ENSPNAG00000015686	hnrnpc	76	49.793	ENSTTRG00000015762	RALYL	79	51.502	Tursiops_truncatus
ENSPNAG00000015686	hnrnpc	74	49.784	ENSVPAG00000008501	RALYL	77	49.351	Vicugna_pacos
ENSPNAG00000015686	hnrnpc	53	86.503	ENSXCOG00000019434	-	69	86.503	Xiphophorus_couchianus
ENSPNAG00000015686	hnrnpc	93	67.870	ENSXCOG00000006552	-	78	69.231	Xiphophorus_couchianus
ENSPNAG00000015686	hnrnpc	88	74.525	ENSXMAG00000009333	-	81	75.806	Xiphophorus_maculatus
ENSPNAG00000015686	hnrnpc	89	76.981	ENSXMAG00000022849	-	80	78.138	Xiphophorus_maculatus