EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000015928 (Gene tree)
Gene ID: 108412965
Gene Symbol: casc3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 11799 bases
Position: chrKV575298.1:1656006-1667804
Accession: 108412965
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000010386	Btz	PF09405.10	1.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000017050	-	4631	XM_017685226	ENSPNAP00000010386	753 (aa)	XP_017540715	UPI000814390F

Gene Model

Click here to download ENSPNAG00000015928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000015928's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000015928	casc3	57	79.412	ENSACIG00000000720	casc3	83	56.928	Amphilophus_citrinellus
ENSPNAG00000015928	casc3	98	57.414	ENSAOCG00000016676	casc3	99	57.393	Amphiprion_ocellaris
ENSPNAG00000015928	casc3	98	57.707	ENSAPEG00000006787	casc3	99	57.809	Amphiprion_percula
ENSPNAG00000015928	casc3	73	56.051	ENSANAG00000034820	-	82	57.962	Aotus_nancymaae
ENSPNAG00000015928	casc3	60	65.728	ENSANAG00000031954	-	87	69.856	Aotus_nancymaae
ENSPNAG00000015928	casc3	100	88.918	ENSAMXG00000032452	casc3	100	87.995	Astyanax_mexicanus
ENSPNAG00000015928	casc3	79	57.792	ENSCAFG00020018882	CASC3	91	52.645	Canis_lupus_dingo
ENSPNAG00000015928	casc3	71	57.742	ENSTSYG00000002975	CASC3	75	60.952	Carlito_syrichta
ENSPNAG00000015928	casc3	98	45.214	ENSCPBG00000004750	CASC3	97	46.463	Chrysemys_picta_bellii
ENSPNAG00000015928	casc3	100	74.802	ENSDARG00000029911	casc3	100	75.198	Danio_rerio
ENSPNAG00000015928	casc3	75	41.197	ENSEBUG00000010654	casc3	74	41.256	Eptatretus_burgeri
ENSPNAG00000015928	casc3	79	57.778	ENSEASG00005002909	CASC3	89	56.338	Equus_asinus_asinus
ENSPNAG00000015928	casc3	98	63.043	ENSELUG00000015093	casc3	99	62.262	Esox_lucius
ENSPNAG00000015928	casc3	91	43.836	ENSFALG00000000412	CASC3	99	45.816	Ficedula_albicollis
ENSPNAG00000015928	casc3	92	47.983	ENSGALG00000031813	CASC3	95	49.229	Gallus_gallus
ENSPNAG00000015928	casc3	58	73.282	ENSGAGG00000008432	CASC3	84	58.824	Gopherus_agassizii
ENSPNAG00000015928	casc3	98	55.007	ENSHCOG00000002664	casc3	93	54.720	Hippocampus_comes
ENSPNAG00000015928	casc3	100	74.452	ENSIPUG00000002679	casc3	100	74.323	Ictalurus_punctatus
ENSPNAG00000015928	casc3	91	55.836	ENSKMAG00000019507	casc3	98	57.124	Kryptolebias_marmoratus
ENSPNAG00000015928	casc3	79	54.559	ENSLBEG00000005435	casc3	99	54.869	Labrus_bergylta
ENSPNAG00000015928	casc3	68	77.830	ENSLOCG00000013518	casc3	68	77.830	Lepisosteus_oculatus
ENSPNAG00000015928	casc3	75	57.419	ENSMFAG00000041496	CASC3	82	60.828	Macaca_fascicularis
ENSPNAG00000015928	casc3	83	46.889	ENSMGAG00000013247	CASC3	99	47.599	Meleagris_gallopavo
ENSPNAG00000015928	casc3	60	88.660	ENSMALG00000019771	casc3	83	83.036	Monopterus_albus
ENSPNAG00000015928	casc3	59	66.667	ENSMEUG00000015662	CASC3	74	52.124	Notamacropus_eugenii
ENSPNAG00000015928	casc3	85	68.166	ENSONIG00000009337	casc3	99	58.455	Oreochromis_niloticus
ENSPNAG00000015928	casc3	98	62.257	ENSPKIG00000023186	casc3	97	61.942	Paramormyrops_kingsleyae
ENSPNAG00000015928	casc3	77	67.657	ENSPFOG00000017632	casc3	100	56.342	Poecilia_formosa
ENSPNAG00000015928	casc3	58	75.000	ENSPREG00000011856	casc3	90	56.180	Poecilia_reticulata
ENSPNAG00000015928	casc3	81	57.827	ENSRNOG00000009716	Casc3	86	59.744	Rattus_norvegicus
ENSPNAG00000015928	casc3	66	57.692	ENSSBOG00000031406	CASC3	78	59.873	Saimiri_boliviensis_boliviensis
ENSPNAG00000015928	casc3	98	62.663	ENSSFOG00015002645	casc3	99	62.274	Scleropages_formosus
ENSPNAG00000015928	casc3	98	53.383	ENSSDUG00000016893	casc3	94	56.642	Seriola_dumerili
ENSPNAG00000015928	casc3	74	64.000	ENSSLDG00000020308	casc3	93	63.272	Seriola_lalandi_dorsalis
ENSPNAG00000015928	casc3	52	58.065	ENSSARG00000010378	CASC3	63	68.919	Sorex_araneus
ENSPNAG00000015928	casc3	75	47.700	ENSTGUG00000002300	CASC3	99	48.376	Taeniopygia_guttata
ENSPNAG00000015928	casc3	94	55.393	ENSTRUG00000000673	casc3	99	55.928	Takifugu_rubripes
ENSPNAG00000015928	casc3	61	65.566	ENSTBEG00000017459	CASC3	57	67.925	Tupaia_belangeri
ENSPNAG00000015928	casc3	53	57.798	ENSTTRG00000016896	CASC3	68	58.255	Tursiops_truncatus
ENSPNAG00000015928	casc3	79	58.333	ENSUAMG00000015116	CASC3	86	60.127	Ursus_americanus
ENSPNAG00000015928	casc3	64	58.654	ENSUMAG00000017697	CASC3	93	60.443	Ursus_maritimus
ENSPNAG00000015928	casc3	99	46.809	ENSXETG00000024395	casc3	98	47.781	Xenopus_tropicalis