EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000016082 (Gene tree)
Gene ID: 108436263
Gene Symbol: rad18
Alias: zgc:55577
Full Name: RAD18%2C E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 67347 bases
Position: chrKV575490.1:411320-478666
Accession: 108436263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000010512	SAP	PF02037.27	1.9e-08	1	1
ENSPNAP00000029774	SAP	PF02037.27	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000017214	-	1768	XM_017712648	ENSPNAP00000029774	448 (aa)	XP_017568137	UPI0008146560
ENSPNAT00000017195	-	1721	XM_017712647	ENSPNAP00000010512	449 (aa)	XP_017568136	UPI00081495FA

Gene Model

Click here to download ENSPNAG00000016082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000016082's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000016082	rad18	82	43.236	ENSG00000070950	RAD18	95	60.465	Homo_sapiens
ENSPNAG00000016082	rad18	99	53.488	ENSAPOG00000005260	rad18	91	53.488	Acanthochromis_polyacanthus
ENSPNAG00000016082	rad18	85	38.605	ENSAMEG00000012375	RAD18	71	38.605	Ailuropoda_melanoleuca
ENSPNAG00000016082	rad18	87	48.219	ENSACIG00000020655	rad18	88	51.042	Amphilophus_citrinellus
ENSPNAG00000016082	rad18	91	54.795	ENSAOCG00000004507	rad18	94	52.941	Amphiprion_ocellaris
ENSPNAG00000016082	rad18	86	56.522	ENSAPEG00000016837	rad18	100	52.854	Amphiprion_percula
ENSPNAG00000016082	rad18	80	43.188	ENSAPLG00000003138	RAD18	75	43.299	Anas_platyrhynchos
ENSPNAG00000016082	rad18	82	41.602	ENSANAG00000033360	RAD18	71	41.602	Aotus_nancymaae
ENSPNAG00000016082	rad18	99	53.277	ENSACLG00000023506	rad18	98	53.731	Astatotilapia_calliptera
ENSPNAG00000016082	rad18	100	80.488	ENSAMXG00000002534	rad18	100	80.488	Astyanax_mexicanus
ENSPNAG00000016082	rad18	85	40.750	ENSBTAG00000012142	RAD18	81	42.000	Bos_taurus
ENSPNAG00000016082	rad18	82	42.368	ENSCJAG00000040303	RAD18	74	42.368	Callithrix_jacchus
ENSPNAG00000016082	rad18	85	41.457	ENSCAFG00000005548	RAD18	74	42.714	Canis_familiaris
ENSPNAG00000016082	rad18	85	41.457	ENSCAFG00020009228	RAD18	74	42.714	Canis_lupus_dingo
ENSPNAG00000016082	rad18	87	40.347	ENSCHIG00000007965	RAD18	94	43.831	Capra_hircus
ENSPNAG00000016082	rad18	79	41.551	ENSTSYG00000012189	RAD18	74	41.667	Carlito_syrichta
ENSPNAG00000016082	rad18	78	40.220	ENSCAPG00000000356	RAD18	77	39.660	Cavia_aperea
ENSPNAG00000016082	rad18	82	42.744	ENSCPOG00000013890	RAD18	72	42.744	Cavia_porcellus
ENSPNAG00000016082	rad18	82	42.971	ENSCCAG00000022920	RAD18	71	42.971	Cebus_capucinus
ENSPNAG00000016082	rad18	82	42.597	ENSCATG00000039277	RAD18	73	42.597	Cercocebus_atys
ENSPNAG00000016082	rad18	99	40.305	ENSCLAG00000003652	RAD18	80	42.118	Chinchilla_lanigera
ENSPNAG00000016082	rad18	82	43.236	ENSCSAG00000010783	RAD18	70	43.501	Chlorocebus_sabaeus
ENSPNAG00000016082	rad18	89	42.131	ENSCPBG00000014787	RAD18	83	42.131	Chrysemys_picta_bellii
ENSPNAG00000016082	rad18	83	43.194	ENSCANG00000007308	RAD18	71	43.501	Colobus_angolensis_palliatus
ENSPNAG00000016082	rad18	82	42.559	ENSCGRG00001018154	-	78	41.842	Cricetulus_griseus_chok1gshd
ENSPNAG00000016082	rad18	83	41.818	ENSCGRG00001010209	-	73	41.818	Cricetulus_griseus_chok1gshd
ENSPNAG00000016082	rad18	83	42.078	ENSCGRG00000019636	-	73	42.078	Cricetulus_griseus_crigri
ENSPNAG00000016082	rad18	82	42.559	ENSCGRG00000007283	-	78	41.842	Cricetulus_griseus_crigri
ENSPNAG00000016082	rad18	98	54.831	ENSCSEG00000002516	rad18	94	54.484	Cynoglossus_semilaevis
ENSPNAG00000016082	rad18	99	64.509	ENSDARG00000027938	rad18	99	63.453	Danio_rerio
ENSPNAG00000016082	rad18	92	39.430	ENSDNOG00000040055	RAD18	80	40.618	Dasypus_novemcinctus
ENSPNAG00000016082	rad18	96	37.310	ENSDORG00000001099	Rad18	78	41.076	Dipodomys_ordii
ENSPNAG00000016082	rad18	68	38.700	ENSETEG00000002268	RAD18	66	38.700	Echinops_telfairi
ENSPNAG00000016082	rad18	82	42.175	ENSEASG00005013316	RAD18	66	43.501	Equus_asinus_asinus
ENSPNAG00000016082	rad18	82	42.175	ENSECAG00000010746	RAD18	69	43.501	Equus_caballus
ENSPNAG00000016082	rad18	73	40.708	ENSEEUG00000000236	-	71	40.351	Erinaceus_europaeus
ENSPNAG00000016082	rad18	100	50.610	ENSELUG00000000733	rad18	97	50.518	Esox_lucius
ENSPNAG00000016082	rad18	85	40.657	ENSFCAG00000025747	RAD18	74	41.919	Felis_catus
ENSPNAG00000016082	rad18	81	44.920	ENSFALG00000013625	RAD18	79	44.920	Ficedula_albicollis
ENSPNAG00000016082	rad18	94	40.138	ENSFDAG00000009907	RAD18	81	40.230	Fukomys_damarensis
ENSPNAG00000016082	rad18	87	42.512	ENSGALG00000008368	RAD18	79	42.998	Gallus_gallus
ENSPNAG00000016082	rad18	86	60.309	ENSGACG00000000920	rad18	99	55.000	Gasterosteus_aculeatus
ENSPNAG00000016082	rad18	78	42.222	ENSGAGG00000005184	RAD18	73	42.222	Gopherus_agassizii
ENSPNAG00000016082	rad18	82	43.947	ENSGGOG00000008391	RAD18	71	44.211	Gorilla_gorilla
ENSPNAG00000016082	rad18	98	50.113	ENSHBUG00000013322	rad18	100	50.113	Haplochromis_burtoni
ENSPNAG00000016082	rad18	70	44.037	ENSHGLG00000009196	-	96	44.037	Heterocephalus_glaber_female
ENSPNAG00000016082	rad18	70	44.037	ENSHGLG00100017675	-	96	44.037	Heterocephalus_glaber_male
ENSPNAG00000016082	rad18	100	73.333	ENSIPUG00000018681	rad18	100	73.333	Ictalurus_punctatus
ENSPNAG00000016082	rad18	70	41.975	ENSSTOG00000004870	-	95	43.887	Ictidomys_tridecemlineatus
ENSPNAG00000016082	rad18	81	44.149	ENSJJAG00000001484	Rad18	78	44.149	Jaculus_jaculus
ENSPNAG00000016082	rad18	96	53.556	ENSKMAG00000020725	rad18	90	53.145	Kryptolebias_marmoratus
ENSPNAG00000016082	rad18	68	41.265	ENSLACG00000018437	RAD18	98	41.265	Latimeria_chalumnae
ENSPNAG00000016082	rad18	88	53.641	ENSLOCG00000010629	rad18	97	51.322	Lepisosteus_oculatus
ENSPNAG00000016082	rad18	83	43.152	ENSLAFG00000004667	RAD18	75	43.152	Loxodonta_africana
ENSPNAG00000016082	rad18	82	42.597	ENSMFAG00000028864	RAD18	71	42.857	Macaca_fascicularis
ENSPNAG00000016082	rad18	82	42.597	ENSMMUG00000020013	RAD18	96	43.465	Macaca_mulatta
ENSPNAG00000016082	rad18	82	42.597	ENSMNEG00000013464	RAD18	71	42.857	Macaca_nemestrina
ENSPNAG00000016082	rad18	82	42.338	ENSMLEG00000014306	RAD18	71	42.597	Mandrillus_leucophaeus
ENSPNAG00000016082	rad18	89	51.716	ENSMAMG00000023936	rad18	91	51.339	Mastacembelus_armatus
ENSPNAG00000016082	rad18	97	53.030	ENSMZEG00005010577	rad18	85	52.854	Maylandia_zebra
ENSPNAG00000016082	rad18	81	43.194	ENSMGAG00000010131	RAD18	75	43.194	Meleagris_gallopavo
ENSPNAG00000016082	rad18	81	42.368	ENSMAUG00000020642	Rad18	78	42.368	Mesocricetus_auratus
ENSPNAG00000016082	rad18	84	40.609	ENSMICG00000013536	RAD18	74	41.582	Microcebus_murinus
ENSPNAG00000016082	rad18	84	43.264	ENSMOCG00000009114	Rad18	78	42.742	Microtus_ochrogaster
ENSPNAG00000016082	rad18	79	55.440	ENSMMOG00000021793	rad18	97	55.440	Mola_mola
ENSPNAG00000016082	rad18	91	40.376	ENSMODG00000004679	RAD18	79	41.549	Monodelphis_domestica
ENSPNAG00000016082	rad18	99	38.723	MGP_CAROLIEiJ_G0028712	Rad18	98	42.943	Mus_caroli
ENSPNAG00000016082	rad18	85	40.494	ENSMUSG00000030254	Rad18	98	41.298	Mus_musculus
ENSPNAG00000016082	rad18	84	40.399	MGP_PahariEiJ_G0022463	Rad18	98	41.298	Mus_pahari
ENSPNAG00000016082	rad18	85	40.741	MGP_SPRETEiJ_G0029740	Rad18	98	41.593	Mus_spretus
ENSPNAG00000016082	rad18	85	41.562	ENSMPUG00000017063	RAD18	74	42.821	Mustela_putorius_furo
ENSPNAG00000016082	rad18	82	42.706	ENSMLUG00000016494	RAD18	70	44.032	Myotis_lucifugus
ENSPNAG00000016082	rad18	81	42.593	ENSNGAG00000012464	Rad18	82	42.593	Nannospalax_galili
ENSPNAG00000016082	rad18	80	50.131	ENSNBRG00000004794	rad18	97	50.131	Neolamprologus_brichardi
ENSPNAG00000016082	rad18	82	43.501	ENSNLEG00000003789	RAD18	71	43.767	Nomascus_leucogenys
ENSPNAG00000016082	rad18	60	42.294	ENSMEUG00000003444	-	61	42.294	Notamacropus_eugenii
ENSPNAG00000016082	rad18	83	40.625	ENSOPRG00000013856	RAD18	73	41.406	Ochotona_princeps
ENSPNAG00000016082	rad18	69	42.368	ENSODEG00000018158	RAD18	96	45.031	Octodon_degus
ENSPNAG00000016082	rad18	99	54.444	ENSONIG00000018979	rad18	99	54.444	Oreochromis_niloticus
ENSPNAG00000016082	rad18	82	41.927	ENSOCUG00000000013	RAD18	70	43.490	Oryctolagus_cuniculus
ENSPNAG00000016082	rad18	79	51.596	ENSORLG00000029026	rad18	95	51.596	Oryzias_latipes
ENSPNAG00000016082	rad18	98	38.428	ENSOGAG00000001410	RAD18	82	40.363	Otolemur_garnettii
ENSPNAG00000016082	rad18	85	40.050	ENSOARG00000007445	RAD18	74	41.294	Ovis_aries
ENSPNAG00000016082	rad18	82	43.501	ENSPPAG00000035797	RAD18	71	43.767	Pan_paniscus
ENSPNAG00000016082	rad18	85	40.909	ENSPPRG00000004021	RAD18	74	42.172	Panthera_pardus
ENSPNAG00000016082	rad18	85	40.909	ENSPTIG00000008602	RAD18	74	42.172	Panthera_tigris_altaica
ENSPNAG00000016082	rad18	82	43.767	ENSPTRG00000014583	RAD18	71	44.032	Pan_troglodytes
ENSPNAG00000016082	rad18	82	41.818	ENSPANG00000008855	RAD18	71	42.857	Papio_anubis
ENSPNAG00000016082	rad18	88	41.787	ENSPSIG00000006928	RAD18	88	39.744	Pelodiscus_sinensis
ENSPNAG00000016082	rad18	76	55.556	ENSPMGG00000013294	rad18	95	55.556	Periophthalmus_magnuspinnatus
ENSPNAG00000016082	rad18	91	39.720	ENSPEMG00000022129	Rad18	80	39.720	Peromyscus_maniculatus_bairdii
ENSPNAG00000016082	rad18	87	40.988	ENSPCIG00000024872	RAD18	82	40.988	Phascolarctos_cinereus
ENSPNAG00000016082	rad18	79	54.090	ENSPFOG00000002722	rad18	96	54.090	Poecilia_formosa
ENSPNAG00000016082	rad18	82	43.501	ENSPPYG00000013688	RAD18	71	43.767	Pongo_abelii
ENSPNAG00000016082	rad18	55	47.414	ENSPCAG00000008229	RAD18	55	47.414	Procavia_capensis
ENSPNAG00000016082	rad18	82	41.379	ENSPVAG00000012220	RAD18	72	42.440	Pteropus_vampyrus
ENSPNAG00000016082	rad18	97	53.463	ENSPNYG00000006815	rad18	92	53.277	Pundamilia_nyererei
ENSPNAG00000016082	rad18	84	42.228	ENSRNOG00000005907	Rad18	74	43.152	Rattus_norvegicus
ENSPNAG00000016082	rad18	82	42.328	ENSRBIG00000044173	RAD18	71	42.593	Rhinopithecus_bieti
ENSPNAG00000016082	rad18	83	42.932	ENSRROG00000043948	RAD18	72	43.501	Rhinopithecus_roxellana
ENSPNAG00000016082	rad18	82	42.706	ENSSBOG00000008434	-	71	42.706	Saimiri_boliviensis_boliviensis
ENSPNAG00000016082	rad18	85	38.025	ENSSHAG00000012472	-	93	38.025	Sarcophilus_harrisii
ENSPNAG00000016082	rad18	97	52.298	ENSSFOG00015019264	rad18	94	53.205	Scleropages_formosus
ENSPNAG00000016082	rad18	69	46.057	ENSSPUG00000017486	RAD18	96	46.057	Sphenodon_punctatus
ENSPNAG00000016082	rad18	95	53.159	ENSSPAG00000007165	rad18	91	53.669	Stegastes_partitus
ENSPNAG00000016082	rad18	83	40.576	ENSSSCG00000026158	RAD18	71	41.842	Sus_scrofa
ENSPNAG00000016082	rad18	95	40.909	ENSTGUG00000010405	RAD18	80	43.979	Taeniopygia_guttata
ENSPNAG00000016082	rad18	80	53.600	ENSTRUG00000003517	rad18	100	53.600	Takifugu_rubripes
ENSPNAG00000016082	rad18	83	55.556	ENSTNIG00000014625	rad18	100	55.556	Tetraodon_nigroviridis
ENSPNAG00000016082	rad18	86	41.058	ENSTTRG00000005034	RAD18	76	41.058	Tursiops_truncatus
ENSPNAG00000016082	rad18	85	41.206	ENSUMAG00000019279	RAD18	74	42.462	Ursus_maritimus
ENSPNAG00000016082	rad18	82	40.267	ENSVPAG00000002063	RAD18	77	41.600	Vicugna_pacos
ENSPNAG00000016082	rad18	99	37.924	ENSVVUG00000025318	RAD18	77	41.855	Vulpes_vulpes
ENSPNAG00000016082	rad18	80	41.005	ENSXETG00000033878	RAD18	94	42.216	Xenopus_tropicalis
ENSPNAG00000016082	rad18	79	48.148	ENSXCOG00000020018	rad18	94	48.148	Xiphophorus_couchianus
ENSPNAG00000016082	rad18	79	48.677	ENSXMAG00000001516	rad18	94	48.677	Xiphophorus_maculatus