EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000016126 (Gene tree)
Gene ID: 108431806
Gene Symbol: snrpb
Alias: zgc:77315
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 3237 bases
Position: chrKV575394.1:1466474-1469710
Accession: 108431806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000010535	LSM	PF01423.22	9.4e-20	1	1
ENSPNAP00000010529	LSM	PF01423.22	9.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000017203	-	732	-	ENSPNAP00000010529	243 (aa)	-	-
ENSPNAT00000017223	-	1218	XM_017705175	ENSPNAP00000010535	238 (aa)	XP_017560664	UPI000814923E

Gene Model

Click here to download ENSPNAG00000016126's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000016126's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000016126	snrpb	70	94.643	ENSG00000125835	SNRPB	74	100.000	Homo_sapiens
ENSPNAG00000016126	snrpb	99	97.479	ENSAPOG00000019606	snrpb	81	97.479	Acanthochromis_polyacanthus
ENSPNAG00000016126	snrpb	69	94.611	ENSAMEG00000011353	SNRPB	75	92.857	Ailuropoda_melanoleuca
ENSPNAG00000016126	snrpb	93	97.309	ENSACIG00000014480	snrpb	99	97.333	Amphilophus_citrinellus
ENSPNAG00000016126	snrpb	99	97.059	ENSAOCG00000006876	snrpb	99	97.059	Amphiprion_ocellaris
ENSPNAG00000016126	snrpb	99	97.059	ENSAPEG00000021585	snrpb	99	97.059	Amphiprion_percula
ENSPNAG00000016126	snrpb	99	96.639	ENSATEG00000009836	snrpb	99	96.639	Anabas_testudineus
ENSPNAG00000016126	snrpb	66	95.625	ENSACAG00000002053	SNRPB	69	93.750	Anolis_carolinensis
ENSPNAG00000016126	snrpb	70	94.643	ENSANAG00000024443	-	77	93.220	Aotus_nancymaae
ENSPNAG00000016126	snrpb	96	87.446	ENSANAG00000036271	-	68	85.119	Aotus_nancymaae
ENSPNAG00000016126	snrpb	99	97.479	ENSACLG00000014707	snrpb	99	97.479	Astatotilapia_calliptera
ENSPNAG00000016126	snrpb	100	99.580	ENSAMXG00000029434	snrpb	100	99.580	Astyanax_mexicanus
ENSPNAG00000016126	snrpb	91	84.163	ENSBTAG00000001038	SNRPB	79	93.443	Bos_taurus
ENSPNAG00000016126	snrpb	89	86.449	ENSCJAG00000023097	-	70	86.905	Callithrix_jacchus
ENSPNAG00000016126	snrpb	70	94.643	ENSCJAG00000020971	-	77	93.220	Callithrix_jacchus
ENSPNAG00000016126	snrpb	70	94.643	ENSCAFG00000006693	-	77	93.220	Canis_familiaris
ENSPNAG00000016126	snrpb	76	80.978	ENSCAFG00000031109	-	70	81.657	Canis_familiaris
ENSPNAG00000016126	snrpb	70	94.643	ENSCAFG00020016981	-	76	92.896	Canis_lupus_dingo
ENSPNAG00000016126	snrpb	76	95.082	ENSCHIG00000025449	-	79	93.443	Capra_hircus
ENSPNAG00000016126	snrpb	97	73.043	ENSTSYG00000032303	-	55	76.000	Carlito_syrichta
ENSPNAG00000016126	snrpb	70	94.643	ENSTSYG00000014498	-	77	93.220	Carlito_syrichta
ENSPNAG00000016126	snrpb	69	94.611	ENSCAPG00000012669	SNRPB	77	93.220	Cavia_aperea
ENSPNAG00000016126	snrpb	70	94.643	ENSCPOG00000039408	SNRPB	77	93.220	Cavia_porcellus
ENSPNAG00000016126	snrpb	53	83.465	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSPNAG00000016126	snrpb	70	94.643	ENSCCAG00000026002	SNRPB	77	93.220	Cebus_capucinus
ENSPNAG00000016126	snrpb	70	94.643	ENSCATG00000030230	SNRPB	77	93.220	Cercocebus_atys
ENSPNAG00000016126	snrpb	70	94.643	ENSCLAG00000012442	SNRPB	77	92.896	Chinchilla_lanigera
ENSPNAG00000016126	snrpb	70	94.643	ENSCSAG00000010840	SNRPB	77	93.220	Chlorocebus_sabaeus
ENSPNAG00000016126	snrpb	70	96.429	ENSCPBG00000026801	SNRPB	77	94.350	Chrysemys_picta_bellii
ENSPNAG00000016126	snrpb	70	94.643	ENSCANG00000019461	SNRPB	77	93.220	Colobus_angolensis_palliatus
ENSPNAG00000016126	snrpb	70	94.643	ENSCGRG00001023046	Snrpb	77	93.220	Cricetulus_griseus_chok1gshd
ENSPNAG00000016126	snrpb	68	94.479	ENSCGRG00000010423	Snrpb	78	93.143	Cricetulus_griseus_crigri
ENSPNAG00000016126	snrpb	99	98.305	ENSCSEG00000020328	snrpb	99	98.305	Cynoglossus_semilaevis
ENSPNAG00000016126	snrpb	99	99.153	ENSDARG00000011125	snrpb	99	99.153	Danio_rerio
ENSPNAG00000016126	snrpb	70	94.643	ENSDNOG00000015545	-	76	92.896	Dasypus_novemcinctus
ENSPNAG00000016126	snrpb	70	88.690	ENSDNOG00000007896	-	73	88.136	Dasypus_novemcinctus
ENSPNAG00000016126	snrpb	74	94.915	ENSDORG00000029558	Snrpb	77	93.785	Dipodomys_ordii
ENSPNAG00000016126	snrpb	76	64.088	FBgn0262601	SmB	74	69.799	Drosophila_melanogaster
ENSPNAG00000016126	snrpb	77	79.891	ENSEBUG00000007467	SNRPB	62	89.262	Eptatretus_burgeri
ENSPNAG00000016126	snrpb	70	94.048	ENSEASG00005012991	SNRPB	77	92.090	Equus_asinus_asinus
ENSPNAG00000016126	snrpb	70	94.643	ENSECAG00000011944	SNRPB	77	93.220	Equus_caballus
ENSPNAG00000016126	snrpb	70	94.643	ENSEEUG00000015568	SNRPB	64	92.896	Erinaceus_europaeus
ENSPNAG00000016126	snrpb	100	97.479	ENSELUG00000014564	snrpb	100	97.479	Esox_lucius
ENSPNAG00000016126	snrpb	70	94.643	ENSFCAG00000034090	-	77	93.220	Felis_catus
ENSPNAG00000016126	snrpb	73	94.857	ENSFALG00000004866	SNRPB	75	93.143	Ficedula_albicollis
ENSPNAG00000016126	snrpb	70	94.643	ENSFDAG00000009937	SNRPB	77	93.220	Fukomys_damarensis
ENSPNAG00000016126	snrpb	76	95.082	ENSGALG00000035421	SNRPN	76	93.443	Gallus_gallus
ENSPNAG00000016126	snrpb	71	98.225	ENSGAFG00000019558	snrpb	72	98.182	Gambusia_affinis
ENSPNAG00000016126	snrpb	99	97.458	ENSGACG00000003262	snrpb	99	97.458	Gasterosteus_aculeatus
ENSPNAG00000016126	snrpb	70	96.429	ENSGAGG00000001308	SNRPB	76	93.989	Gopherus_agassizii
ENSPNAG00000016126	snrpb	70	94.643	ENSGGOG00000016138	SNRPB	77	93.220	Gorilla_gorilla
ENSPNAG00000016126	snrpb	99	97.479	ENSHBUG00000008369	snrpb	99	97.479	Haplochromis_burtoni
ENSPNAG00000016126	snrpb	63	86.000	ENSHGLG00000016505	-	72	86.000	Heterocephalus_glaber_female
ENSPNAG00000016126	snrpb	70	94.643	ENSHGLG00000016241	-	77	93.220	Heterocephalus_glaber_female
ENSPNAG00000016126	snrpb	70	94.643	ENSHGLG00100012877	-	77	93.220	Heterocephalus_glaber_male
ENSPNAG00000016126	snrpb	63	86.000	ENSHGLG00100004178	-	72	86.000	Heterocephalus_glaber_male
ENSPNAG00000016126	snrpb	99	97.881	ENSHCOG00000014888	snrpb	99	97.881	Hippocampus_comes
ENSPNAG00000016126	snrpb	100	99.580	ENSIPUG00000024569	SNRPB	100	99.580	Ictalurus_punctatus
ENSPNAG00000016126	snrpb	70	92.857	ENSSTOG00000033664	-	74	91.525	Ictidomys_tridecemlineatus
ENSPNAG00000016126	snrpb	90	78.037	ENSSTOG00000027821	-	62	94.853	Ictidomys_tridecemlineatus
ENSPNAG00000016126	snrpb	70	94.643	ENSJJAG00000024170	Snrpb	77	93.220	Jaculus_jaculus
ENSPNAG00000016126	snrpb	71	99.412	ENSKMAG00000014494	snrpb	68	99.398	Kryptolebias_marmoratus
ENSPNAG00000016126	snrpb	99	98.305	ENSLBEG00000005678	snrpb	99	98.305	Labrus_bergylta
ENSPNAG00000016126	snrpb	76	93.989	ENSLACG00000011459	SNRPB	76	92.896	Latimeria_chalumnae
ENSPNAG00000016126	snrpb	100	99.160	ENSLOCG00000002687	snrpb	100	99.160	Lepisosteus_oculatus
ENSPNAG00000016126	snrpb	76	90.659	ENSLAFG00000017588	SNRPB	78	89.011	Loxodonta_africana
ENSPNAG00000016126	snrpb	70	94.643	ENSMFAG00000038756	SNRPB	77	93.220	Macaca_fascicularis
ENSPNAG00000016126	snrpb	70	94.643	ENSMMUG00000010050	SNRPB	77	93.220	Macaca_mulatta
ENSPNAG00000016126	snrpb	70	94.643	ENSMNEG00000027954	SNRPB	77	93.220	Macaca_nemestrina
ENSPNAG00000016126	snrpb	70	94.643	ENSMLEG00000022346	SNRPB	77	93.220	Mandrillus_leucophaeus
ENSPNAG00000016126	snrpb	99	97.468	ENSMAMG00000009294	snrpb	96	97.468	Mastacembelus_armatus
ENSPNAG00000016126	snrpb	99	97.479	ENSMZEG00005011856	snrpb	99	97.479	Maylandia_zebra
ENSPNAG00000016126	snrpb	76	95.082	ENSMICG00000016519	SNRPB	79	93.443	Microcebus_murinus
ENSPNAG00000016126	snrpb	75	85.083	ENSMICG00000015983	-	81	83.616	Microcebus_murinus
ENSPNAG00000016126	snrpb	70	94.048	ENSMOCG00000002892	-	77	92.655	Microtus_ochrogaster
ENSPNAG00000016126	snrpb	77	63.298	ENSMOCG00000021362	-	80	72.396	Microtus_ochrogaster
ENSPNAG00000016126	snrpb	95	98.230	ENSMMOG00000013226	snrpb	97	98.230	Mola_mola
ENSPNAG00000016126	snrpb	99	96.639	ENSMALG00000020839	snrpb	80	96.639	Monopterus_albus
ENSPNAG00000016126	snrpb	70	94.643	MGP_CAROLIEiJ_G0024293	Snrpb	74	100.000	Mus_caroli
ENSPNAG00000016126	snrpb	70	94.643	ENSMUSG00000027404	Snrpb	74	100.000	Mus_musculus
ENSPNAG00000016126	snrpb	70	94.643	MGP_PahariEiJ_G0025738	Snrpb	74	100.000	Mus_pahari
ENSPNAG00000016126	snrpb	70	94.643	MGP_SPRETEiJ_G0025213	Snrpb	73	100.000	Mus_spretus
ENSPNAG00000016126	snrpb	70	94.643	ENSMPUG00000009283	SNRPB	77	93.220	Mustela_putorius_furo
ENSPNAG00000016126	snrpb	92	90.498	ENSMLUG00000016951	SNRPB	92	90.950	Myotis_lucifugus
ENSPNAG00000016126	snrpb	70	94.643	ENSNGAG00000012051	Snrpb	77	93.220	Nannospalax_galili
ENSPNAG00000016126	snrpb	95	95.197	ENSNBRG00000006353	snrpb	94	89.879	Neolamprologus_brichardi
ENSPNAG00000016126	snrpb	70	94.643	ENSNLEG00000029067	SNRPB	76	92.896	Nomascus_leucogenys
ENSPNAG00000016126	snrpb	69	94.611	ENSMEUG00000015625	SNRPB	79	93.220	Notamacropus_eugenii
ENSPNAG00000016126	snrpb	92	89.091	ENSODEG00000004305	-	92	89.545	Octodon_degus
ENSPNAG00000016126	snrpb	70	89.286	ENSODEG00000016060	-	77	87.978	Octodon_degus
ENSPNAG00000016126	snrpb	99	97.479	ENSONIG00000000248	snrpb	99	97.479	Oreochromis_niloticus
ENSPNAG00000016126	snrpb	89	90.233	ENSOCUG00000021456	-	76	89.617	Oryctolagus_cuniculus
ENSPNAG00000016126	snrpb	76	95.082	ENSOCUG00000014042	-	76	93.443	Oryctolagus_cuniculus
ENSPNAG00000016126	snrpb	74	88.268	ENSOCUG00000022423	-	86	88.690	Oryctolagus_cuniculus
ENSPNAG00000016126	snrpb	89	66.667	ENSOCUG00000026813	-	63	66.892	Oryctolagus_cuniculus
ENSPNAG00000016126	snrpb	89	92.488	ENSOCUG00000028215	-	76	91.257	Oryctolagus_cuniculus
ENSPNAG00000016126	snrpb	75	97.207	ENSORLG00000021862	snrpb	69	98.795	Oryzias_latipes
ENSPNAG00000016126	snrpb	70	94.643	ENSOGAG00000016149	SNRPB	76	92.896	Otolemur_garnettii
ENSPNAG00000016126	snrpb	76	95.082	ENSOARG00000006740	SNRPB	79	93.443	Ovis_aries
ENSPNAG00000016126	snrpb	70	94.643	ENSPPAG00000036314	SNRPB	77	93.220	Pan_paniscus
ENSPNAG00000016126	snrpb	70	94.643	ENSPPRG00000003233	-	77	93.220	Panthera_pardus
ENSPNAG00000016126	snrpb	69	94.611	ENSPTIG00000007468	SNRPB	77	93.220	Panthera_tigris_altaica
ENSPNAG00000016126	snrpb	70	94.643	ENSPTRG00000013176	SNRPB	77	93.220	Pan_troglodytes
ENSPNAG00000016126	snrpb	70	94.643	ENSPANG00000020362	SNRPB	76	92.896	Papio_anubis
ENSPNAG00000016126	snrpb	100	98.739	ENSPKIG00000002865	snrpb	100	98.739	Paramormyrops_kingsleyae
ENSPNAG00000016126	snrpb	69	96.407	ENSPSIG00000014125	SNRPB	75	93.956	Pelodiscus_sinensis
ENSPNAG00000016126	snrpb	92	95.536	ENSPMGG00000016349	snrpb	95	95.536	Periophthalmus_magnuspinnatus
ENSPNAG00000016126	snrpb	70	94.643	ENSPEMG00000007948	Snrpb	77	93.220	Peromyscus_maniculatus_bairdii
ENSPNAG00000016126	snrpb	69	94.012	ENSPCIG00000004694	SNRPB	76	92.308	Phascolarctos_cinereus
ENSPNAG00000016126	snrpb	78	77.949	ENSPLAG00000014130	snrpb	59	98.529	Poecilia_latipinna
ENSPNAG00000016126	snrpb	78	79.894	ENSPREG00000015515	snrpb	63	98.529	Poecilia_reticulata
ENSPNAG00000016126	snrpb	70	94.643	ENSPPYG00000010841	SNRPB	77	93.220	Pongo_abelii
ENSPNAG00000016126	snrpb	70	94.643	ENSPCOG00000013686	SNRPB	77	93.220	Propithecus_coquereli
ENSPNAG00000016126	snrpb	92	91.855	ENSPVAG00000017013	SNRPB	77	92.308	Pteropus_vampyrus
ENSPNAG00000016126	snrpb	99	97.479	ENSPNYG00000014788	snrpb	99	97.479	Pundamilia_nyererei
ENSPNAG00000016126	snrpb	70	94.643	ENSRNOG00000006961	Snrpb	73	100.000	Rattus_norvegicus
ENSPNAG00000016126	snrpb	70	94.643	ENSRBIG00000040505	SNRPB	73	92.857	Rhinopithecus_bieti
ENSPNAG00000016126	snrpb	70	94.643	ENSRROG00000036094	SNRPB	77	93.220	Rhinopithecus_roxellana
ENSPNAG00000016126	snrpb	70	94.643	ENSSBOG00000027310	SNRPB	77	93.220	Saimiri_boliviensis_boliviensis
ENSPNAG00000016126	snrpb	70	95.238	ENSSHAG00000010394	SNRPB	76	93.443	Sarcophilus_harrisii
ENSPNAG00000016126	snrpb	100	97.479	ENSSFOG00015002870	snrpb	100	97.479	Scleropages_formosus
ENSPNAG00000016126	snrpb	99	97.881	ENSSMAG00000006766	snrpb	99	97.881	Scophthalmus_maximus
ENSPNAG00000016126	snrpb	99	97.479	ENSSDUG00000018539	snrpb	99	97.479	Seriola_dumerili
ENSPNAG00000016126	snrpb	99	97.479	ENSSLDG00000022391	snrpb	99	97.479	Seriola_lalandi_dorsalis
ENSPNAG00000016126	snrpb	92	80.909	ENSSARG00000003084	SNRPB	94	81.364	Sorex_araneus
ENSPNAG00000016126	snrpb	69	96.407	ENSSPUG00000015659	SNRPB	76	93.956	Sphenodon_punctatus
ENSPNAG00000016126	snrpb	99	97.479	ENSSPAG00000021992	snrpb	99	97.479	Stegastes_partitus
ENSPNAG00000016126	snrpb	76	95.082	ENSSSCG00000040857	-	79	93.443	Sus_scrofa
ENSPNAG00000016126	snrpb	95	74.672	ENSSSCG00000011966	-	77	70.492	Sus_scrofa
ENSPNAG00000016126	snrpb	74	80.791	ENSTGUG00000005684	SNRPB	59	97.143	Taeniopygia_guttata
ENSPNAG00000016126	snrpb	95	97.797	ENSTRUG00000023094	snrpb	99	97.797	Takifugu_rubripes
ENSPNAG00000016126	snrpb	99	97.881	ENSTNIG00000002991	snrpb	99	97.881	Tetraodon_nigroviridis
ENSPNAG00000016126	snrpb	70	94.643	ENSUAMG00000005984	-	80	92.262	Ursus_americanus
ENSPNAG00000016126	snrpb	90	56.221	ENSUMAG00000002123	-	63	94.891	Ursus_maritimus
ENSPNAG00000016126	snrpb	70	94.048	ENSVVUG00000025654	-	76	92.350	Vulpes_vulpes
ENSPNAG00000016126	snrpb	100	72.500	ENSVVUG00000010086	-	71	75.595	Vulpes_vulpes
ENSPNAG00000016126	snrpb	63	98.000	ENSXETG00000027266	snrpb	63	98.000	Xenopus_tropicalis
ENSPNAG00000016126	snrpb	60	93.793	ENSXMAG00000028767	snrpb	58	98.529	Xiphophorus_maculatus