EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000016198 (Gene tree)
Gene ID: -
Gene Symbol: ovol1b
Alias: si:dkey-17e16.13
Full Name: putative transcription factor Ovo-like 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 7463 bases
Position: chrKV575343.1:1306728-1314190
Accession: 108427908
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000010590	zf-C2H2	PF00096.26	1.3e-16	1	3
ENSPNAP00000010590	zf-C2H2	PF00096.26	1.3e-16	2	3
ENSPNAP00000010590	zf-C2H2	PF00096.26	1.3e-16	3	3
ENSPNAP00000029830	zf-C2H2	PF00096.26	2.4e-16	1	3
ENSPNAP00000029830	zf-C2H2	PF00096.26	2.4e-16	2	3
ENSPNAP00000029830	zf-C2H2	PF00096.26	2.4e-16	3	3
ENSPNAP00000029830	zf-met	PF12874.7	4e-09	1	2
ENSPNAP00000029830	zf-met	PF12874.7	4e-09	2	2
ENSPNAP00000010590	zf-met	PF12874.7	1.5e-08	1	2
ENSPNAP00000010590	zf-met	PF12874.7	1.5e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000017315	-	591	-	ENSPNAP00000029830	196 (aa)	-	-
ENSPNAT00000017375	-	747	XM_017698497	ENSPNAP00000010590	248 (aa)	XP_017553986	-

Gene Model

Click here to download ENSPNAG00000016198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000016198's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000016198	ovol1b	68	34.513	ENSPNAG00000021863	-	56	31.373
ENSPNAG00000016198	ovol1b	68	33.333	ENSPNAG00000029997	-	76	33.333
ENSPNAG00000016198	ovol1b	82	45.312	ENSPNAG00000021075	-	92	45.312
ENSPNAG00000016198	ovol1b	57	35.714	ENSPNAG00000006535	znf319b	53	41.333
ENSPNAG00000016198	ovol1b	96	47.059	ENSPNAG00000020630	ovol1a	89	47.059
ENSPNAG00000016198	ovol1b	67	37.363	ENSPNAG00000015131	-	81	37.363
ENSPNAG00000016198	ovol1b	75	43.750	ENSPNAG00000010317	-	74	42.857
ENSPNAG00000016198	ovol1b	73	39.695	ENSPNAG00000029386	-	89	39.286
ENSPNAG00000016198	ovol1b	68	35.664	ENSPNAG00000009176	-	84	36.154
ENSPNAG00000016198	ovol1b	68	36.449	ENSPNAG00000021765	-	93	37.500
ENSPNAG00000016198	ovol1b	69	38.000	ENSPNAG00000019338	-	93	38.144
ENSPNAG00000016198	ovol1b	80	35.870	ENSPNAG00000006821	-	94	34.737
ENSPNAG00000016198	ovol1b	68	36.029	ENSPNAG00000012154	-	82	36.029
ENSPNAG00000016198	ovol1b	65	40.541	ENSPNAG00000015513	si:dkey-210j14.3	90	40.541
ENSPNAG00000016198	ovol1b	72	43.421	ENSPNAG00000003702	-	60	38.667
ENSPNAG00000016198	ovol1b	67	35.526	ENSPNAG00000015896	snai2	50	35.526
ENSPNAG00000016198	ovol1b	68	37.647	ENSPNAG00000003919	-	90	37.647
ENSPNAG00000016198	ovol1b	68	35.714	ENSPNAG00000019534	-	83	35.714
ENSPNAG00000016198	ovol1b	67	39.286	ENSPNAG00000016025	-	82	39.286
ENSPNAG00000016198	ovol1b	68	36.154	ENSPNAG00000007072	-	87	36.154
ENSPNAG00000016198	ovol1b	71	37.500	ENSPNAG00000006039	-	85	37.500
ENSPNAG00000016198	ovol1b	69	38.519	ENSPNAG00000003526	-	82	38.519
ENSPNAG00000016198	ovol1b	69	37.273	ENSPNAG00000012138	-	88	37.273
ENSPNAG00000016198	ovol1b	67	36.364	ENSPNAG00000008491	-	72	36.458
ENSPNAG00000016198	ovol1b	78	37.838	ENSPNAG00000000088	-	88	37.838
ENSPNAG00000016198	ovol1b	67	40.404	ENSPNAG00000012495	-	79	40.404
ENSPNAG00000016198	ovol1b	81	39.326	ENSPNAG00000025570	-	80	39.326
ENSPNAG00000016198	ovol1b	59	42.105	ENSPNAG00000010850	-	78	42.105
ENSPNAG00000016198	ovol1b	70	40.625	ENSPNAG00000008653	-	96	40.625
ENSPNAG00000016198	ovol1b	73	37.500	ENSPNAG00000005914	-	73	37.500
ENSPNAG00000016198	ovol1b	69	41.463	ENSPNAG00000017479	-	81	41.463
ENSPNAG00000016198	ovol1b	68	37.288	ENSPNAG00000002209	-	83	37.288
ENSPNAG00000016198	ovol1b	69	35.897	ENSPNAG00000018409	-	79	35.897
ENSPNAG00000016198	ovol1b	77	37.405	ENSPNAG00000011625	-	96	37.405
ENSPNAG00000016198	ovol1b	67	37.500	ENSPNAG00000027916	-	89	37.500
ENSPNAG00000016198	ovol1b	71	36.066	ENSPNAG00000014492	-	91	36.066
ENSPNAG00000016198	ovol1b	67	30.147	ENSPNAG00000004042	si:ch211-166g5.4	83	30.147
ENSPNAG00000016198	ovol1b	68	36.923	ENSPNAG00000002287	-	76	36.923
ENSPNAG00000016198	ovol1b	64	38.182	ENSPNAG00000018644	-	89	38.182
ENSPNAG00000016198	ovol1b	66	39.773	ENSPNAG00000021118	gfi1b	53	39.773
ENSPNAG00000016198	ovol1b	70	37.879	ENSPNAG00000000066	-	75	37.879
ENSPNAG00000016198	ovol1b	71	38.182	ENSPNAG00000012366	-	86	38.182
ENSPNAG00000016198	ovol1b	68	36.607	ENSPNAG00000016478	-	98	42.667
ENSPNAG00000016198	ovol1b	79	36.885	ENSPNAG00000012206	-	98	36.885
ENSPNAG00000016198	ovol1b	72	33.962	ENSPNAG00000026181	prdm5	52	34.940
ENSPNAG00000016198	ovol1b	72	38.000	ENSPNAG00000009184	-	85	38.000
ENSPNAG00000016198	ovol1b	69	34.000	ENSPNAG00000010752	-	80	32.000
ENSPNAG00000016198	ovol1b	72	44.681	ENSPNAG00000017138	znf236	72	40.541
ENSPNAG00000016198	ovol1b	72	37.363	ENSPNAG00000010678	-	96	36.842
ENSPNAG00000016198	ovol1b	68	37.363	ENSPNAG00000021942	-	89	36.364
ENSPNAG00000016198	ovol1b	79	39.759	ENSPNAG00000025882	-	59	40.206
ENSPNAG00000016198	ovol1b	68	37.037	ENSPNAG00000018437	-	77	41.379
ENSPNAG00000016198	ovol1b	71	37.857	ENSPNAG00000007266	-	96	39.316
ENSPNAG00000016198	ovol1b	68	38.519	ENSPNAG00000018471	-	75	38.393
ENSPNAG00000016198	ovol1b	68	35.000	ENSPNAG00000009741	-	54	35.000
ENSPNAG00000016198	ovol1b	76	41.250	ENSPNAG00000028014	GFI1	59	40.741
ENSPNAG00000016198	ovol1b	68	36.364	ENSPNAG00000017455	-	70	35.652
ENSPNAG00000016198	ovol1b	74	38.168	ENSPNAG00000005829	-	79	37.857
ENSPNAG00000016198	ovol1b	74	37.273	ENSPNAG00000001150	znf648	54	38.144
ENSPNAG00000016198	ovol1b	74	35.156	ENSPNAG00000005857	-	85	36.885
ENSPNAG00000016198	ovol1b	67	39.344	ENSPNAG00000016045	-	62	39.344
ENSPNAG00000016198	ovol1b	69	35.971	ENSPNAG00000002244	-	81	35.714
ENSPNAG00000016198	ovol1b	82	41.667	ENSPNAG00000000783	-	82	39.604

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000016198	ovol1b	93	45.993	ENSAMXG00000011046	ovol1a	93	44.408	Astyanax_mexicanus
ENSPNAG00000016198	ovol1b	94	69.565	ENSAMXG00000041879	ovol1b	89	69.565	Astyanax_mexicanus
ENSPNAG00000016198	ovol1b	93	49.648	ENSDARG00000076472	ovol1a	88	49.648	Danio_rerio
ENSPNAG00000016198	ovol1b	97	51.825	ENSDARG00000078256	ovol1b	94	51.825	Danio_rerio
ENSPNAG00000016198	ovol1b	93	45.847	ENSELUG00000000343	ovol1a	88	45.847	Esox_lucius
ENSPNAG00000016198	ovol1b	94	42.525	ENSFHEG00000002773	-	92	41.401	Fundulus_heteroclitus
ENSPNAG00000016198	ovol1b	94	49.804	ENSGACG00000018794	ovol1a	86	49.421	Gasterosteus_aculeatus
ENSPNAG00000016198	ovol1b	80	60.123	ENSHCOG00000015860	ovol1a	90	43.581	Hippocampus_comes
ENSPNAG00000016198	ovol1b	94	43.771	ENSKMAG00000002605	-	91	42.997	Kryptolebias_marmoratus
ENSPNAG00000016198	ovol1b	94	43.189	ENSMAMG00000009768	ovol1a	87	42.193	Mastacembelus_armatus
ENSPNAG00000016198	ovol1b	100	42.500	ENSMALG00000008421	ovol1a	93	42.500	Monopterus_albus
ENSPNAG00000016198	ovol1b	94	53.516	ENSPKIG00000024718	ovol1a	85	53.516	Paramormyrops_kingsleyae
ENSPNAG00000016198	ovol1b	94	49.583	ENSPFOG00000008841	-	85	50.000	Poecilia_formosa
ENSPNAG00000016198	ovol1b	94	42.345	ENSSDUG00000009846	ovol1a	89	41.640	Seriola_dumerili