EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000016200 (Gene tree)
Gene ID: 108427422
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 49317 bases
Position: chrKV575336.1:3834572-3883888
Accession: 108427422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000029831	zf-C2H2_jaz	PF12171.8	3.3e-06	1	1
ENSPNAP00000010624	zf-C2H2_jaz	PF12171.8	3.4e-06	1	1
ENSPNAP00000010624	G-patch	PF01585.23	8.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000017316	-	4242	XM_017697535	ENSPNAP00000029831	1413 (aa)	XP_017553024	-
ENSPNAT00000017334	-	4578	XM_017697534	ENSPNAP00000010624	1458 (aa)	XP_017553023	-

Gene Model

Click here to download ENSPNAG00000016200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000016200's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000016200	gpatch8	58	64.806	ENSAPOG00000023938	gpatch8	59	63.341	Acanthochromis_polyacanthus
ENSPNAG00000016200	gpatch8	58	64.626	ENSACIG00000012241	gpatch8	59	62.474	Amphilophus_citrinellus
ENSPNAG00000016200	gpatch8	58	65.119	ENSAOCG00000018102	gpatch8	59	63.646	Amphiprion_ocellaris
ENSPNAG00000016200	gpatch8	58	65.153	ENSAPEG00000016776	gpatch8	59	63.685	Amphiprion_percula
ENSPNAG00000016200	gpatch8	58	63.895	ENSACLG00000004165	gpatch8	59	61.135	Astatotilapia_calliptera
ENSPNAG00000016200	gpatch8	97	83.265	ENSAMXG00000041683	gpatch8	93	83.129	Astyanax_mexicanus
ENSPNAG00000016200	gpatch8	73	48.083	ENSCPBG00000008955	GPATCH8	67	48.454	Chrysemys_picta_bellii
ENSPNAG00000016200	gpatch8	58	60.341	ENSCSEG00000021277	gpatch8	59	61.033	Cynoglossus_semilaevis
ENSPNAG00000016200	gpatch8	58	63.031	ENSCVAG00000013477	gpatch8	59	63.666	Cyprinodon_variegatus
ENSPNAG00000016200	gpatch8	96	67.862	ENSDARG00000059768	gpatch8	59	69.499	Danio_rerio
ENSPNAG00000016200	gpatch8	58	62.180	ENSELUG00000019920	gpatch8	58	62.013	Esox_lucius
ENSPNAG00000016200	gpatch8	67	57.342	ENSFCAG00000043334	GPATCH8	64	56.748	Felis_catus
ENSPNAG00000016200	gpatch8	58	61.822	ENSFHEG00000005791	gpatch8	59	60.912	Fundulus_heteroclitus
ENSPNAG00000016200	gpatch8	58	61.899	ENSGAFG00000018138	gpatch8	59	61.530	Gambusia_affinis
ENSPNAG00000016200	gpatch8	58	63.564	ENSHBUG00000002669	gpatch8	59	60.981	Haplochromis_burtoni
ENSPNAG00000016200	gpatch8	68	59.265	ENSHGLG00100010738	GPATCH8	76	57.841	Heterocephalus_glaber_male
ENSPNAG00000016200	gpatch8	64	57.834	ENSHCOG00000017518	gpatch8	57	55.006	Hippocampus_comes
ENSPNAG00000016200	gpatch8	64	78.526	ENSIPUG00000015431	gpatch8	60	78.228	Ictalurus_punctatus
ENSPNAG00000016200	gpatch8	58	60.508	ENSKMAG00000018364	gpatch8	59	62.080	Kryptolebias_marmoratus
ENSPNAG00000016200	gpatch8	58	62.529	ENSLBEG00000023352	gpatch8	59	60.691	Labrus_bergylta
ENSPNAG00000016200	gpatch8	55	59.318	ENSLOCG00000012265	gpatch8	68	56.803	Lepisosteus_oculatus
ENSPNAG00000016200	gpatch8	55	60.530	ENSMAMG00000001618	gpatch8	57	58.926	Mastacembelus_armatus
ENSPNAG00000016200	gpatch8	58	64.009	ENSMZEG00005022584	gpatch8	59	61.135	Maylandia_zebra
ENSPNAG00000016200	gpatch8	58	63.835	ENSMMOG00000020472	gpatch8	59	61.781	Mola_mola
ENSPNAG00000016200	gpatch8	58	63.688	ENSMALG00000004204	gpatch8	59	63.112	Monopterus_albus
ENSPNAG00000016200	gpatch8	58	63.823	ENSNBRG00000016402	gpatch8	59	61.135	Neolamprologus_brichardi
ENSPNAG00000016200	gpatch8	58	62.284	ENSONIG00000001292	gpatch8	59	59.307	Oreochromis_niloticus
ENSPNAG00000016200	gpatch8	58	62.710	ENSORLG00000028497	gpatch8	59	60.642	Oryzias_latipes
ENSPNAG00000016200	gpatch8	60	61.774	ENSORLG00020006656	gpatch8	59	60.726	Oryzias_latipes_hni
ENSPNAG00000016200	gpatch8	58	62.416	ENSORLG00015019797	gpatch8	59	60.642	Oryzias_latipes_hsok
ENSPNAG00000016200	gpatch8	58	60.502	ENSOMEG00000023809	gpatch8	59	60.173	Oryzias_melastigma
ENSPNAG00000016200	gpatch8	55	57.856	ENSPKIG00000018753	gpatch8	56	55.493	Paramormyrops_kingsleyae
ENSPNAG00000016200	gpatch8	64	57.794	ENSPKIG00000004860	GPATCH8	54	56.849	Paramormyrops_kingsleyae
ENSPNAG00000016200	gpatch8	97	57.584	ENSPMGG00000000730	gpatch8	57	57.316	Periophthalmus_magnuspinnatus
ENSPNAG00000016200	gpatch8	58	61.283	ENSPFOG00000014833	gpatch8	59	60.818	Poecilia_formosa
ENSPNAG00000016200	gpatch8	58	60.294	ENSPLAG00000001035	gpatch8	59	61.249	Poecilia_latipinna
ENSPNAG00000016200	gpatch8	58	61.670	ENSPMEG00000024032	gpatch8	59	60.818	Poecilia_mexicana
ENSPNAG00000016200	gpatch8	58	62.804	ENSPREG00000008911	gpatch8	59	61.672	Poecilia_reticulata
ENSPNAG00000016200	gpatch8	58	63.895	ENSPNYG00000009426	gpatch8	59	61.135	Pundamilia_nyererei
ENSPNAG00000016200	gpatch8	58	57.520	ENSSFOG00015004299	GPATCH8	55	56.849	Scleropages_formosus
ENSPNAG00000016200	gpatch8	55	63.073	ENSSDUG00000018065	gpatch8	57	61.977	Seriola_dumerili
ENSPNAG00000016200	gpatch8	58	65.901	ENSSLDG00000009225	gpatch8	59	64.418	Seriola_lalandi_dorsalis
ENSPNAG00000016200	gpatch8	58	62.844	ENSSPAG00000011368	gpatch8	59	63.341	Stegastes_partitus
ENSPNAG00000016200	gpatch8	58	60.161	ENSTRUG00000020474	gpatch8	59	58.919	Takifugu_rubripes
ENSPNAG00000016200	gpatch8	58	61.460	ENSXCOG00000016680	gpatch8	59	60.665	Xiphophorus_couchianus
ENSPNAG00000016200	gpatch8	58	61.257	ENSXMAG00000009217	gpatch8	59	61.052	Xiphophorus_maculatus