EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000016207 (Gene tree)
Gene ID: 108437526
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 14077 bases
Position: chrKV575522.1:1106710-1120786
Accession: 108437526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000010551	KH_1	PF00013.29	5.7e-68	1	4
ENSPNAP00000010551	KH_1	PF00013.29	5.7e-68	2	4
ENSPNAP00000010551	KH_1	PF00013.29	5.7e-68	3	4
ENSPNAP00000010551	KH_1	PF00013.29	5.7e-68	4	4
ENSPNAP00000029838	KH_1	PF00013.29	2.1e-67	1	4
ENSPNAP00000029838	KH_1	PF00013.29	2.1e-67	2	4
ENSPNAP00000029838	KH_1	PF00013.29	2.1e-67	3	4
ENSPNAP00000029838	KH_1	PF00013.29	2.1e-67	4	4
ENSPNAP00000010608	KH_1	PF00013.29	2.1e-67	1	4
ENSPNAP00000010608	KH_1	PF00013.29	2.1e-67	2	4
ENSPNAP00000010608	KH_1	PF00013.29	2.1e-67	3	4
ENSPNAP00000010608	KH_1	PF00013.29	2.1e-67	4	4
ENSPNAP00000010551	KH_2	PF07650.17	9.5e-22	1	1
ENSPNAP00000029838	KH_2	PF07650.17	5.7e-20	1	1
ENSPNAP00000010608	KH_2	PF07650.17	5.7e-20	1	1
ENSPNAP00000010608	DUF1897	PF09005.10	4.3e-13	1	2
ENSPNAP00000010608	DUF1897	PF09005.10	4.3e-13	2	2
ENSPNAP00000029838	DUF1897	PF09005.10	4.4e-13	1	2
ENSPNAP00000029838	DUF1897	PF09005.10	4.4e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000017365	-	2320	-	ENSPNAP00000029838	657 (aa)	-	-
ENSPNAT00000017250	-	1548	-	ENSPNAP00000010551	515 (aa)	-	-
ENSPNAT00000035783	-	3408	XM_017714671	ENSPNAP00000010608	658 (aa)	XP_017570160	-

Gene Model

Click here to download ENSPNAG00000016207's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000016207's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000016207	fubp1	95	54.688	ENSPNAG00000012026	khsrp	100	54.167
ENSPNAG00000016207	fubp1	68	44.444	ENSPNAG00000001885	pcbp2	90	44.444
ENSPNAG00000016207	fubp1	63	31.325	ENSPNAG00000011228	igf2bp2b	64	31.325
ENSPNAG00000016207	fubp1	68	37.879	ENSPNAG00000024351	nova1	66	33.594
ENSPNAG00000016207	fubp1	95	67.273	ENSPNAG00000013478	fubp3	92	61.717

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000016207	fubp1	87	77.440	ENSG00000162613	FUBP1	100	72.100	Homo_sapiens
ENSPNAG00000016207	fubp1	100	81.900	ENSAPOG00000014845	fubp1	98	81.571	Acanthochromis_polyacanthus
ENSPNAG00000016207	fubp1	87	73.554	ENSAMEG00000007372	FUBP1	100	69.602	Ailuropoda_melanoleuca
ENSPNAG00000016207	fubp1	100	81.818	ENSACIG00000020024	fubp1	100	79.514	Amphilophus_citrinellus
ENSPNAG00000016207	fubp1	98	79.962	ENSAPEG00000012232	fubp1	100	79.336	Amphiprion_percula
ENSPNAG00000016207	fubp1	100	86.556	ENSATEG00000018619	fubp1	100	86.405	Anabas_testudineus
ENSPNAG00000016207	fubp1	81	78.910	ENSAPLG00000005965	FUBP1	100	72.240	Anas_platyrhynchos
ENSPNAG00000016207	fubp1	87	72.840	ENSACAG00000006310	FUBP1	96	69.653	Anolis_carolinensis
ENSPNAG00000016207	fubp1	100	86.384	ENSACLG00000006708	fubp1	100	85.174	Astatotilapia_calliptera
ENSPNAG00000016207	fubp1	86	92.101	ENSAMXG00000005525	fubp1	99	92.101	Astyanax_mexicanus
ENSPNAG00000016207	fubp1	87	77.223	ENSCJAG00000007062	FUBP1	100	72.700	Callithrix_jacchus
ENSPNAG00000016207	fubp1	87	77.223	ENSCAFG00000020361	FUBP1	100	71.953	Canis_familiaris
ENSPNAG00000016207	fubp1	82	78.066	ENSTSYG00000000148	FUBP1	100	72.756	Carlito_syrichta
ENSPNAG00000016207	fubp1	68	84.677	ENSCAPG00000011052	-	65	84.677	Cavia_aperea
ENSPNAG00000016207	fubp1	87	77.223	ENSCPOG00000002757	FUBP1	98	80.272	Cavia_porcellus
ENSPNAG00000016207	fubp1	91	63.401	ENSCCAG00000036537	FUBP1	100	63.689	Cebus_capucinus
ENSPNAG00000016207	fubp1	87	77.440	ENSCATG00000042126	FUBP1	100	72.100	Cercocebus_atys
ENSPNAG00000016207	fubp1	87	77.223	ENSCLAG00000005621	FUBP1	100	80.892	Chinchilla_lanigera
ENSPNAG00000016207	fubp1	87	77.440	ENSCSAG00000001402	FUBP1	100	72.100	Chlorocebus_sabaeus
ENSPNAG00000016207	fubp1	87	77.007	ENSCHOG00000008177	FUBP1	98	71.366	Choloepus_hoffmanni
ENSPNAG00000016207	fubp1	87	78.289	ENSCGRG00001007103	Fubp1	100	72.255	Cricetulus_griseus_chok1gshd
ENSPNAG00000016207	fubp1	81	79.097	ENSCGRG00000003372	Fubp1	98	79.592	Cricetulus_griseus_crigri
ENSPNAG00000016207	fubp1	100	85.129	ENSCSEG00000021412	fubp1	98	83.156	Cynoglossus_semilaevis
ENSPNAG00000016207	fubp1	100	85.628	ENSCVAG00000014487	fubp1	99	85.909	Cyprinodon_variegatus
ENSPNAG00000016207	fubp1	100	82.589	ENSDARG00000029248	fubp1	100	84.673	Danio_rerio
ENSPNAG00000016207	fubp1	88	55.657	ENSDNOG00000034565	-	85	47.788	Dasypus_novemcinctus
ENSPNAG00000016207	fubp1	87	77.440	ENSDORG00000016534	Fubp1	98	72.404	Dipodomys_ordii
ENSPNAG00000016207	fubp1	86	77.233	ENSETEG00000000948	-	53	78.426	Echinops_telfairi
ENSPNAG00000016207	fubp1	87	48.925	ENSEBUG00000016143	fubp1	64	66.667	Eptatretus_burgeri
ENSPNAG00000016207	fubp1	83	84.053	ENSEEUG00000001287	FUBP1	87	67.366	Erinaceus_europaeus
ENSPNAG00000016207	fubp1	100	86.507	ENSELUG00000007990	fubp1	100	86.657	Esox_lucius
ENSPNAG00000016207	fubp1	87	77.391	ENSFALG00000005768	FUBP1	98	71.620	Ficedula_albicollis
ENSPNAG00000016207	fubp1	87	77.007	ENSFDAG00000014210	FUBP1	100	79.592	Fukomys_damarensis
ENSPNAG00000016207	fubp1	100	85.650	ENSFHEG00000005230	fubp1	100	85.801	Fundulus_heteroclitus
ENSPNAG00000016207	fubp1	100	80.484	ENSGMOG00000003370	fubp1	100	77.156	Gadus_morhua
ENSPNAG00000016207	fubp1	87	77.826	ENSGALG00000008939	FUBP1	100	72.107	Gallus_gallus
ENSPNAG00000016207	fubp1	100	84.398	ENSGAFG00000020972	fubp1	100	84.398	Gambusia_affinis
ENSPNAG00000016207	fubp1	100	83.358	ENSGACG00000016563	fubp1	100	81.194	Gasterosteus_aculeatus
ENSPNAG00000016207	fubp1	100	86.364	ENSHBUG00000009835	fubp1	100	86.515	Haplochromis_burtoni
ENSPNAG00000016207	fubp1	87	77.223	ENSHGLG00000008415	-	100	80.892	Heterocephalus_glaber_female
ENSPNAG00000016207	fubp1	90	71.429	ENSHGLG00000002808	-	100	65.089	Heterocephalus_glaber_female
ENSPNAG00000016207	fubp1	90	72.068	ENSHGLG00100001414	-	100	65.533	Heterocephalus_glaber_male
ENSPNAG00000016207	fubp1	87	77.223	ENSHGLG00100003417	-	100	70.949	Heterocephalus_glaber_male
ENSPNAG00000016207	fubp1	100	84.889	ENSHCOG00000000910	fubp1	100	84.593	Hippocampus_comes
ENSPNAG00000016207	fubp1	100	88.386	ENSIPUG00000009896	fubp1	100	88.839	Ictalurus_punctatus
ENSPNAG00000016207	fubp1	87	77.342	ENSSTOG00000014312	FUBP1	100	72.214	Ictidomys_tridecemlineatus
ENSPNAG00000016207	fubp1	87	77.681	ENSJJAG00000020069	Fubp1	100	79.592	Jaculus_jaculus
ENSPNAG00000016207	fubp1	100	85.263	ENSKMAG00000018897	fubp1	100	84.060	Kryptolebias_marmoratus
ENSPNAG00000016207	fubp1	100	81.885	ENSLBEG00000012700	fubp1	97	83.776	Labrus_bergylta
ENSPNAG00000016207	fubp1	98	84.281	ENSLOCG00000003745	fubp1	100	82.653	Lepisosteus_oculatus
ENSPNAG00000016207	fubp1	87	74.167	ENSLAFG00000003273	FUBP1	99	73.024	Loxodonta_africana
ENSPNAG00000016207	fubp1	87	77.440	ENSMFAG00000031825	FUBP1	100	72.849	Macaca_fascicularis
ENSPNAG00000016207	fubp1	87	77.560	ENSMMUG00000002899	FUBP1	100	72.100	Macaca_mulatta
ENSPNAG00000016207	fubp1	87	77.440	ENSMNEG00000045212	FUBP1	100	72.100	Macaca_nemestrina
ENSPNAG00000016207	fubp1	100	85.224	ENSMAMG00000007489	fubp1	99	85.501	Mastacembelus_armatus
ENSPNAG00000016207	fubp1	100	86.212	ENSMZEG00005024298	fubp1	100	86.364	Maylandia_zebra
ENSPNAG00000016207	fubp1	81	78.910	ENSMGAG00000009424	FUBP1	100	72.327	Meleagris_gallopavo
ENSPNAG00000016207	fubp1	87	77.440	ENSMAUG00000016428	Fubp1	98	80.272	Mesocricetus_auratus
ENSPNAG00000016207	fubp1	87	77.899	ENSMOCG00000014751	Fubp1	98	79.592	Microtus_ochrogaster
ENSPNAG00000016207	fubp1	87	85.565	ENSMMOG00000019463	fubp1	99	81.707	Mola_mola
ENSPNAG00000016207	fubp1	84	69.717	ENSMODG00000020804	FUBP1	100	67.267	Monodelphis_domestica
ENSPNAG00000016207	fubp1	100	86.384	ENSMALG00000015173	fubp1	100	86.384	Monopterus_albus
ENSPNAG00000016207	fubp1	87	77.681	MGP_CAROLIEiJ_G0025740	Fubp1	98	79.592	Mus_caroli
ENSPNAG00000016207	fubp1	87	77.462	ENSMUSG00000028034	Fubp1	98	78.912	Mus_musculus
ENSPNAG00000016207	fubp1	87	77.511	MGP_PahariEiJ_G0027191	Fubp1	98	79.592	Mus_pahari
ENSPNAG00000016207	fubp1	87	77.681	MGP_SPRETEiJ_G0026693	Fubp1	98	79.592	Mus_spretus
ENSPNAG00000016207	fubp1	87	73.402	ENSMLUG00000014802	FUBP1	100	68.234	Myotis_lucifugus
ENSPNAG00000016207	fubp1	92	75.385	ENSNGAG00000014302	Fubp1	98	79.592	Nannospalax_galili
ENSPNAG00000016207	fubp1	98	80.306	ENSNBRG00000015099	fubp1	100	78.907	Neolamprologus_brichardi
ENSPNAG00000016207	fubp1	87	75.325	ENSNLEG00000009772	FUBP1	100	70.162	Nomascus_leucogenys
ENSPNAG00000016207	fubp1	86	90.566	ENSOPRG00000001175	FUBP1	91	70.231	Ochotona_princeps
ENSPNAG00000016207	fubp1	99	53.528	ENSODEG00000003657	-	98	49.540	Octodon_degus
ENSPNAG00000016207	fubp1	87	77.223	ENSODEG00000002600	-	100	79.592	Octodon_degus
ENSPNAG00000016207	fubp1	100	85.888	ENSONIG00000018381	fubp1	97	86.495	Oreochromis_niloticus
ENSPNAG00000016207	fubp1	75	78.788	ENSOANG00000009777	FUBP1	99	72.392	Ornithorhynchus_anatinus
ENSPNAG00000016207	fubp1	100	76.292	ENSORLG00000003540	fubp1	99	79.787	Oryzias_latipes
ENSPNAG00000016207	fubp1	100	83.934	ENSORLG00020005908	fubp1	96	83.483	Oryzias_latipes_hni
ENSPNAG00000016207	fubp1	100	84.558	ENSORLG00015008779	fubp1	99	83.308	Oryzias_latipes_hsok
ENSPNAG00000016207	fubp1	100	84.211	ENSOMEG00000021943	fubp1	97	83.459	Oryzias_melastigma
ENSPNAG00000016207	fubp1	87	73.251	ENSOGAG00000014233	FUBP1	100	68.927	Otolemur_garnettii
ENSPNAG00000016207	fubp1	87	76.180	ENSOARG00000013259	FUBP1	100	74.777	Ovis_aries
ENSPNAG00000016207	fubp1	87	77.223	ENSPPRG00000000413	FUBP1	100	71.953	Panthera_pardus
ENSPNAG00000016207	fubp1	87	77.223	ENSPTIG00000019450	FUBP1	100	71.953	Panthera_tigris_altaica
ENSPNAG00000016207	fubp1	83	77.367	ENSPSIG00000012965	FUBP1	100	71.451	Pelodiscus_sinensis
ENSPNAG00000016207	fubp1	100	80.723	ENSPMGG00000009060	fubp1	99	77.828	Periophthalmus_magnuspinnatus
ENSPNAG00000016207	fubp1	87	77.851	ENSPEMG00000021802	Fubp1	100	79.592	Peromyscus_maniculatus_bairdii
ENSPNAG00000016207	fubp1	74	53.725	ENSPMAG00000001644	-	100	55.645	Petromyzon_marinus
ENSPNAG00000016207	fubp1	100	85.952	ENSPFOG00000000238	fubp1	100	86.103	Poecilia_formosa
ENSPNAG00000016207	fubp1	98	80.880	ENSPLAG00000021170	fubp1	100	82.753	Poecilia_latipinna
ENSPNAG00000016207	fubp1	100	82.371	ENSPMEG00000004747	fubp1	99	87.417	Poecilia_mexicana
ENSPNAG00000016207	fubp1	100	85.952	ENSPREG00000017911	fubp1	100	86.103	Poecilia_reticulata
ENSPNAG00000016207	fubp1	91	75.362	ENSPPYG00000001219	-	68	79.212	Pongo_abelii
ENSPNAG00000016207	fubp1	87	77.174	ENSPCAG00000012617	FUBP1	98	71.662	Procavia_capensis
ENSPNAG00000016207	fubp1	87	77.223	ENSPCOG00000024974	FUBP1	100	71.953	Propithecus_coquereli
ENSPNAG00000016207	fubp1	87	71.087	ENSPVAG00000014637	FUBP1	98	67.794	Pteropus_vampyrus
ENSPNAG00000016207	fubp1	100	86.212	ENSPNYG00000004552	fubp1	100	86.364	Pundamilia_nyererei
ENSPNAG00000016207	fubp1	87	76.623	ENSRNOG00000043370	Fubp1	100	72.660	Rattus_norvegicus
ENSPNAG00000016207	fubp1	87	77.706	ENSRBIG00000042950	FUBP1	100	72.100	Rhinopithecus_bieti
ENSPNAG00000016207	fubp1	87	77.706	ENSRROG00000043534	FUBP1	100	72.100	Rhinopithecus_roxellana
ENSPNAG00000016207	fubp1	87	77.223	ENSSBOG00000027299	FUBP1	98	74.464	Saimiri_boliviensis_boliviensis
ENSPNAG00000016207	fubp1	82	77.934	ENSSHAG00000005367	FUBP1	98	73.868	Sarcophilus_harrisii
ENSPNAG00000016207	fubp1	100	88.333	ENSSFOG00015010213	fubp1	100	87.879	Scleropages_formosus
ENSPNAG00000016207	fubp1	100	83.063	ENSSMAG00000012029	fubp1	98	83.211	Scophthalmus_maximus
ENSPNAG00000016207	fubp1	100	85.736	ENSSDUG00000007383	fubp1	98	85.587	Seriola_dumerili
ENSPNAG00000016207	fubp1	100	85.736	ENSSLDG00000022863	fubp1	98	85.587	Seriola_lalandi_dorsalis
ENSPNAG00000016207	fubp1	87	86.207	ENSSARG00000011730	FUBP1	56	90.698	Sorex_araneus
ENSPNAG00000016207	fubp1	100	70.162	ENSSPUG00000008389	FUBP1	100	68.588	Sphenodon_punctatus
ENSPNAG00000016207	fubp1	100	87.141	ENSSPAG00000010161	fubp1	100	87.292	Stegastes_partitus
ENSPNAG00000016207	fubp1	81	78.037	ENSTGUG00000006841	FUBP1	100	71.719	Taeniopygia_guttata
ENSPNAG00000016207	fubp1	100	82.920	ENSTRUG00000004615	fubp1	100	81.898	Takifugu_rubripes
ENSPNAG00000016207	fubp1	67	78.698	ENSTNIG00000019815	-	100	78.698	Tetraodon_nigroviridis
ENSPNAG00000016207	fubp1	80	85.549	ENSTBEG00000017333	FUBP1	60	82.659	Tupaia_belangeri
ENSPNAG00000016207	fubp1	87	77.223	ENSTTRG00000000096	FUBP1	98	72.255	Tursiops_truncatus
ENSPNAG00000016207	fubp1	87	77.223	ENSVPAG00000004709	FUBP1	99	71.471	Vicugna_pacos
ENSPNAG00000016207	fubp1	98	84.024	ENSXCOG00000019354	fubp1	100	77.761	Xiphophorus_couchianus
ENSPNAG00000016207	fubp1	92	87.294	ENSXMAG00000007168	fubp1	99	87.086	Xiphophorus_maculatus