EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000016567 (Gene tree)
Gene ID: 108414691
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 18622 bases
Position: chrKV576907.1:1133-19754
Accession: 108414691
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000030083	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000035927	-	910	XM_017687586	ENSPNAP00000030083	213 (aa)	XP_017543075	UPI0008147381

Gene Model

Click here to download ENSPNAG00000016567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000016567's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000016567	rab42a	98	39.070	ENSPNAG00000014363	-	97	39.070
ENSPNAG00000016567	rab42a	97	32.524	ENSPNAG00000028138	rab5c	88	32.524
ENSPNAG00000016567	rab42a	97	34.466	ENSPNAG00000005519	-	94	34.466
ENSPNAG00000016567	rab42a	77	34.146	ENSPNAG00000009496	rab5ab	75	34.146
ENSPNAG00000016567	rab42a	100	59.624	ENSPNAG00000013589	rab39bb	100	59.624
ENSPNAG00000016567	rab42a	98	38.278	ENSPNAG00000020475	rab11ba	95	38.278
ENSPNAG00000016567	rab42a	96	37.089	ENSPNAG00000011215	rab15	96	37.089
ENSPNAG00000016567	rab42a	69	44.595	ENSPNAG00000029115	rab33ba	66	44.595
ENSPNAG00000016567	rab42a	96	36.620	ENSPNAG00000014146	-	95	36.620
ENSPNAG00000016567	rab42a	71	36.184	ENSPNAG00000026295	si:ch73-116o1.2	78	35.976
ENSPNAG00000016567	rab42a	68	34.028	ENSPNAG00000018361	rras	81	33.121
ENSPNAG00000016567	rab42a	76	35.185	ENSPNAG00000023223	rab5aa	74	35.185
ENSPNAG00000016567	rab42a	77	38.922	ENSPNAG00000018132	rab9b	74	38.922
ENSPNAG00000016567	rab42a	83	34.091	ENSPNAG00000015161	rab22a	89	34.091
ENSPNAG00000016567	rab42a	76	32.727	ENSPNAG00000015164	-	79	32.727
ENSPNAG00000016567	rab42a	99	37.559	ENSPNAG00000017856	zgc:101559	88	37.559
ENSPNAG00000016567	rab42a	87	31.156	ENSPNAG00000007710	rasl11a	76	31.156
ENSPNAG00000016567	rab42a	84	33.871	ENSPNAG00000021994	rab36	70	33.871
ENSPNAG00000016567	rab42a	96	30.622	ENSPNAG00000016600	-	96	30.622
ENSPNAG00000016567	rab42a	100	59.155	ENSPNAG00000013897	rab39ba	100	59.155
ENSPNAG00000016567	rab42a	77	43.902	ENSPNAG00000014046	-	80	43.902
ENSPNAG00000016567	rab42a	71	33.553	ENSPNAG00000013747	mras	78	33.537
ENSPNAG00000016567	rab42a	80	34.682	ENSPNAG00000003179	rab34a	66	34.682
ENSPNAG00000016567	rab42a	97	34.951	ENSPNAG00000028379	rab6ba	94	34.951
ENSPNAG00000016567	rab42a	82	39.429	ENSPNAG00000002404	rab18b	84	39.429
ENSPNAG00000016567	rab42a	77	35.119	ENSPNAG00000017466	rab38b	80	35.119
ENSPNAG00000016567	rab42a	89	33.862	ENSPNAG00000004728	rheb	96	33.862
ENSPNAG00000016567	rab42a	86	40.761	ENSPNAG00000013004	rab1ba	91	40.761
ENSPNAG00000016567	rab42a	97	34.466	ENSPNAG00000010157	rab6bb	94	34.466
ENSPNAG00000016567	rab42a	99	38.571	ENSPNAG00000006569	rab25b	97	38.571
ENSPNAG00000016567	rab42a	99	39.524	ENSPNAG00000000694	rab25a	97	39.524
ENSPNAG00000016567	rab42a	87	39.785	ENSPNAG00000015031	rab12	82	38.350
ENSPNAG00000016567	rab42a	77	38.323	ENSPNAG00000017938	RAB9A	75	38.323
ENSPNAG00000016567	rab42a	84	42.135	ENSPNAG00000012540	-	87	42.135
ENSPNAG00000016567	rab42a	73	33.974	ENSPNAG00000024728	rab23	74	34.194
ENSPNAG00000016567	rab42a	82	42.857	ENSPNAG00000018986	si:dkey-16l2.16	82	42.857
ENSPNAG00000016567	rab42a	92	40.513	ENSPNAG00000013863	rab1ab	86	40.513
ENSPNAG00000016567	rab42a	89	46.842	ENSPNAG00000011193	rab2a	89	46.842
ENSPNAG00000016567	rab42a	77	41.818	ENSPNAG00000011548	rab18a	82	41.818
ENSPNAG00000016567	rab42a	77	43.558	ENSPNAG00000003227	rab3c	74	43.558
ENSPNAG00000016567	rab42a	91	32.323	ENSPNAG00000015040	rab34b	85	33.493
ENSPNAG00000016567	rab42a	71	34.437	ENSPNAG00000000584	hrasb	85	33.537
ENSPNAG00000016567	rab42a	75	42.500	ENSPNAG00000015810	RAB15	77	42.500
ENSPNAG00000016567	rab42a	97	36.408	ENSPNAG00000021737	rab41	93	36.408
ENSPNAG00000016567	rab42a	77	36.585	ENSPNAG00000002218	-	76	36.585
ENSPNAG00000016567	rab42a	77	40.120	ENSPNAG00000007277	RAB9A	78	40.120
ENSPNAG00000016567	rab42a	100	38.028	ENSPNAG00000029574	zgc:171927	99	38.028
ENSPNAG00000016567	rab42a	97	40.385	ENSPNAG00000029085	rab11al	95	40.385
ENSPNAG00000016567	rab42a	82	41.176	ENSPNAG00000021675	-	86	41.176
ENSPNAG00000016567	rab42a	77	31.176	ENSPNAG00000028497	si:cabz01085950.1	82	31.176
ENSPNAG00000016567	rab42a	98	37.799	ENSPNAG00000006431	-	95	37.799
ENSPNAG00000016567	rab42a	75	33.540	ENSPNAG00000028629	kras	96	30.890
ENSPNAG00000016567	rab42a	74	32.278	ENSPNAG00000024254	rabl2	86	30.198
ENSPNAG00000016567	rab42a	78	41.916	ENSPNAG00000004189	rab13	87	41.916
ENSPNAG00000016567	rab42a	71	34.437	ENSPNAG00000014085	hrasa	85	33.537
ENSPNAG00000016567	rab42a	75	46.875	ENSPNAG00000010760	rab30	79	46.875
ENSPNAG00000016567	rab42a	97	39.130	ENSPNAG00000014863	rab11a	95	39.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000016567	rab42a	100	89.908	ENSAPOG00000009188	rab42a	100	91.743	Acanthochromis_polyacanthus
ENSPNAG00000016567	rab42a	100	89.908	ENSACIG00000003102	rab42a	100	90.826	Amphilophus_citrinellus
ENSPNAG00000016567	rab42a	100	88.991	ENSAOCG00000012921	rab42a	83	90.367	Amphiprion_ocellaris
ENSPNAG00000016567	rab42a	100	88.991	ENSAPEG00000007713	rab42a	83	90.367	Amphiprion_percula
ENSPNAG00000016567	rab42a	100	89.450	ENSATEG00000009052	rab42a	100	89.450	Anabas_testudineus
ENSPNAG00000016567	rab42a	100	91.244	ENSACLG00000007514	rab42a	100	91.244	Astatotilapia_calliptera
ENSPNAG00000016567	rab42a	100	99.061	ENSAMXG00000032729	rab42a	100	99.061	Astyanax_mexicanus
ENSPNAG00000016567	rab42a	100	88.532	ENSCSEG00000010582	rab42a	100	88.532	Cynoglossus_semilaevis
ENSPNAG00000016567	rab42a	100	48.131	ENSDARG00000102580	CU571310.1	99	48.131	Danio_rerio
ENSPNAG00000016567	rab42a	100	96.244	ENSDARG00000034215	rab42a	100	96.244	Danio_rerio
ENSPNAG00000016567	rab42a	100	88.889	ENSELUG00000010345	rab42a	100	88.889	Esox_lucius
ENSPNAG00000016567	rab42a	100	89.450	ENSFHEG00000013106	rab42a	100	89.450	Fundulus_heteroclitus
ENSPNAG00000016567	rab42a	100	88.073	ENSGAFG00000002141	rab42a	100	88.073	Gambusia_affinis
ENSPNAG00000016567	rab42a	100	91.244	ENSHBUG00000015126	rab42a	82	91.244	Haplochromis_burtoni
ENSPNAG00000016567	rab42a	100	96.244	ENSIPUG00000011376	rab42a	100	96.244	Ictalurus_punctatus
ENSPNAG00000016567	rab42a	100	88.532	ENSKMAG00000007267	rab42a	100	89.450	Kryptolebias_marmoratus
ENSPNAG00000016567	rab42a	100	89.401	ENSLBEG00000001193	rab42a	100	90.323	Labrus_bergylta
ENSPNAG00000016567	rab42a	100	65.728	ENSLACG00000012755	-	100	65.728	Latimeria_chalumnae
ENSPNAG00000016567	rab42a	100	51.402	ENSLOCG00000015825	-	99	51.402	Lepisosteus_oculatus
ENSPNAG00000016567	rab42a	100	87.324	ENSLOCG00000003453	rab42a	100	87.324	Lepisosteus_oculatus
ENSPNAG00000016567	rab42a	100	89.908	ENSMAMG00000002296	rab42a	100	91.284	Mastacembelus_armatus
ENSPNAG00000016567	rab42a	100	91.244	ENSMZEG00005012460	rab42a	82	91.244	Maylandia_zebra
ENSPNAG00000016567	rab42a	100	88.073	ENSMMOG00000014358	rab42a	100	88.073	Mola_mola
ENSPNAG00000016567	rab42a	100	91.284	ENSNBRG00000021487	rab42a	82	91.284	Neolamprologus_brichardi
ENSPNAG00000016567	rab42a	100	90.826	ENSORLG00000022335	rab42a	100	90.826	Oryzias_latipes
ENSPNAG00000016567	rab42a	100	90.826	ENSORLG00020013895	rab42a	100	90.826	Oryzias_latipes_hni
ENSPNAG00000016567	rab42a	100	90.826	ENSORLG00015004273	rab42a	100	90.826	Oryzias_latipes_hsok
ENSPNAG00000016567	rab42a	100	90.826	ENSOMEG00000020418	rab42a	100	90.826	Oryzias_melastigma
ENSPNAG00000016567	rab42a	100	80.282	ENSPKIG00000021215	-	100	80.282	Paramormyrops_kingsleyae
ENSPNAG00000016567	rab42a	99	49.057	ENSPKIG00000015234	-	99	49.057	Paramormyrops_kingsleyae
ENSPNAG00000016567	rab42a	92	94.416	ENSPMGG00000024112	rab42a	90	94.416	Periophthalmus_magnuspinnatus
ENSPNAG00000016567	rab42a	100	88.073	ENSPFOG00000004838	rab42a	82	88.073	Poecilia_formosa
ENSPNAG00000016567	rab42a	100	88.073	ENSPLAG00000005628	rab42a	100	88.073	Poecilia_latipinna
ENSPNAG00000016567	rab42a	100	88.073	ENSPMEG00000019497	rab42a	100	88.073	Poecilia_mexicana
ENSPNAG00000016567	rab42a	100	88.073	ENSPREG00000013962	rab42a	100	88.073	Poecilia_reticulata
ENSPNAG00000016567	rab42a	100	91.244	ENSPNYG00000010325	rab42a	82	91.244	Pundamilia_nyererei
ENSPNAG00000016567	rab42a	100	89.202	ENSSFOG00015020732	rab42a	100	89.202	Scleropages_formosus
ENSPNAG00000016567	rab42a	100	47.664	ENSSFOG00015016000	-	97	47.664	Scleropages_formosus
ENSPNAG00000016567	rab42a	100	88.073	ENSSMAG00000020311	rab42a	100	88.073	Scophthalmus_maximus
ENSPNAG00000016567	rab42a	100	89.908	ENSSDUG00000011851	rab42a	100	89.908	Seriola_dumerili
ENSPNAG00000016567	rab42a	100	89.908	ENSSLDG00000020354	rab42a	100	89.908	Seriola_lalandi_dorsalis
ENSPNAG00000016567	rab42a	100	89.908	ENSSPAG00000016167	rab42a	100	91.284	Stegastes_partitus
ENSPNAG00000016567	rab42a	100	91.284	ENSTRUG00000010224	rab42a	100	91.284	Takifugu_rubripes
ENSPNAG00000016567	rab42a	100	88.532	ENSXCOG00000003428	rab42a	100	88.532	Xiphophorus_couchianus
ENSPNAG00000016567	rab42a	100	88.532	ENSXMAG00000028376	rab42a	100	88.532	Xiphophorus_maculatus