EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000016595 (Gene tree)
Gene ID: 108428365
Gene Symbol: polr2j
Alias: rpb11|zgc:110005
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 2124 bases
Position: chrKV575288.1:5519529-5521652
Accession: 108428365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000010979	RNA_pol_L_2	PF13656.6	4.6e-29	1	1
ENSPNAP00000010979	RNA_pol_L	PF01193.24	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000035934	-	354	XM_017699300	ENSPNAP00000010979	117 (aa)	XP_017554789	UPI0008143BF1

Gene Model

Click here to download ENSPNAG00000016595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000016595's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000016595	polr2j	79	32.609	ENSPNAG00000001512	polr1d	77	32.609

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000016595	polr2j	91	92.523	ENSG00000228049	POLR2J2	94	89.908	Homo_sapiens
ENSPNAG00000016595	polr2j	100	94.017	ENSG00000005075	POLR2J	100	94.017	Homo_sapiens
ENSPNAG00000016595	polr2j	100	94.872	ENSAPOG00000019538	polr2j	100	94.872	Acanthochromis_polyacanthus
ENSPNAG00000016595	polr2j	100	86.614	ENSAMEG00000015480	-	100	86.614	Ailuropoda_melanoleuca
ENSPNAG00000016595	polr2j	93	72.727	ENSACIG00000014549	POLR2J2	91	72.727	Amphilophus_citrinellus
ENSPNAG00000016595	polr2j	100	94.017	ENSAOCG00000006937	polr2j	100	94.017	Amphiprion_ocellaris
ENSPNAG00000016595	polr2j	100	94.872	ENSAPEG00000021761	polr2j	100	94.872	Amphiprion_percula
ENSPNAG00000016595	polr2j	100	94.872	ENSATEG00000009731	polr2j	100	94.872	Anabas_testudineus
ENSPNAG00000016595	polr2j	100	94.872	ENSATEG00000013312	-	100	94.872	Anabas_testudineus
ENSPNAG00000016595	polr2j	86	91.089	ENSAPLG00000003744	-	100	91.089	Anas_platyrhynchos
ENSPNAG00000016595	polr2j	100	85.470	ENSACAG00000000251	POLR2J	100	85.470	Anolis_carolinensis
ENSPNAG00000016595	polr2j	100	94.872	ENSACLG00000014564	polr2j	100	94.872	Astatotilapia_calliptera
ENSPNAG00000016595	polr2j	100	97.436	ENSAMXG00000007517	polr2j	100	97.436	Astyanax_mexicanus
ENSPNAG00000016595	polr2j	62	65.753	ENSBTAG00000048046	-	61	65.753	Bos_taurus
ENSPNAG00000016595	polr2j	94	67.273	WBGene00012187	rpb-11	89	67.273	Caenorhabditis_elegans
ENSPNAG00000016595	polr2j	100	94.017	ENSCJAG00000016203	-	100	94.017	Callithrix_jacchus
ENSPNAG00000016595	polr2j	100	94.017	ENSCAFG00000013683	-	100	94.017	Canis_familiaris
ENSPNAG00000016595	polr2j	85	92.929	ENSTSYG00000029243	-	85	92.929	Carlito_syrichta
ENSPNAG00000016595	polr2j	100	94.017	ENSCPOG00000001401	-	100	94.017	Cavia_porcellus
ENSPNAG00000016595	polr2j	100	70.940	ENSCATG00000016595	-	96	81.319	Cercocebus_atys
ENSPNAG00000016595	polr2j	100	94.017	ENSCLAG00000005238	-	100	94.017	Chinchilla_lanigera
ENSPNAG00000016595	polr2j	100	94.017	ENSCSAG00000018092	-	100	94.017	Chlorocebus_sabaeus
ENSPNAG00000016595	polr2j	100	83.761	ENSCING00000020531	-	100	83.761	Ciona_intestinalis
ENSPNAG00000016595	polr2j	100	83.761	ENSCSAVG00000006948	-	100	83.761	Ciona_savignyi
ENSPNAG00000016595	polr2j	100	94.017	ENSCGRG00001012814	Polr2j	100	94.017	Cricetulus_griseus_chok1gshd
ENSPNAG00000016595	polr2j	100	80.342	ENSCGRG00000008433	Polr2j	100	80.342	Cricetulus_griseus_crigri
ENSPNAG00000016595	polr2j	100	92.308	ENSCSEG00000020352	polr2j	100	92.308	Cynoglossus_semilaevis
ENSPNAG00000016595	polr2j	100	94.017	ENSCVAG00000014267	polr2j	100	94.017	Cyprinodon_variegatus
ENSPNAG00000016595	polr2j	100	98.291	ENSDARG00000035146	polr2j	100	98.291	Danio_rerio
ENSPNAG00000016595	polr2j	100	94.017	ENSDORG00000005934	Polr2j	100	94.017	Dipodomys_ordii
ENSPNAG00000016595	polr2j	98	79.130	FBgn0032634	Rpb11	98	79.130	Drosophila_melanogaster
ENSPNAG00000016595	polr2j	100	65.812	ENSEBUG00000016100	polr2j	100	65.812	Eptatretus_burgeri
ENSPNAG00000016595	polr2j	100	94.017	ENSEASG00005016864	-	100	94.017	Equus_asinus_asinus
ENSPNAG00000016595	polr2j	100	95.726	ENSELUG00000012822	polr2j	100	95.726	Esox_lucius
ENSPNAG00000016595	polr2j	100	94.017	ENSFCAG00000000377	-	100	94.017	Felis_catus
ENSPNAG00000016595	polr2j	100	94.017	ENSFALG00000009523	POLR2J	100	94.017	Ficedula_albicollis
ENSPNAG00000016595	polr2j	100	94.017	ENSFDAG00000010507	-	100	94.017	Fukomys_damarensis
ENSPNAG00000016595	polr2j	100	94.872	ENSFHEG00000006625	polr2j	100	94.872	Fundulus_heteroclitus
ENSPNAG00000016595	polr2j	100	95.726	ENSGMOG00000018207	polr2j	100	95.726	Gadus_morhua
ENSPNAG00000016595	polr2j	100	94.017	ENSGALG00000030808	-	100	94.017	Gallus_gallus
ENSPNAG00000016595	polr2j	100	94.872	ENSGAFG00000019555	polr2j	100	94.872	Gambusia_affinis
ENSPNAG00000016595	polr2j	100	94.872	ENSGACG00000003310	polr2j	100	94.872	Gasterosteus_aculeatus
ENSPNAG00000016595	polr2j	97	84.071	ENSGAGG00000018304	-	96	84.071	Gopherus_agassizii
ENSPNAG00000016595	polr2j	85	89.000	ENSGGOG00000004519	-	80	89.000	Gorilla_gorilla
ENSPNAG00000016595	polr2j	100	94.872	ENSHBUG00000008467	polr2j	100	94.872	Haplochromis_burtoni
ENSPNAG00000016595	polr2j	100	94.017	ENSHGLG00000013598	POLR2J	100	94.017	Heterocephalus_glaber_female
ENSPNAG00000016595	polr2j	100	94.017	ENSHGLG00100011242	POLR2J	100	94.017	Heterocephalus_glaber_male
ENSPNAG00000016595	polr2j	100	95.726	ENSHCOG00000014827	polr2j	68	95.726	Hippocampus_comes
ENSPNAG00000016595	polr2j	100	97.436	ENSIPUG00000023960	polr2j	100	97.436	Ictalurus_punctatus
ENSPNAG00000016595	polr2j	100	94.017	ENSSTOG00000006377	POLR2J	100	94.017	Ictidomys_tridecemlineatus
ENSPNAG00000016595	polr2j	100	88.889	ENSJJAG00000018834	-	100	88.889	Jaculus_jaculus
ENSPNAG00000016595	polr2j	100	94.017	ENSJJAG00000013854	-	100	94.017	Jaculus_jaculus
ENSPNAG00000016595	polr2j	100	94.872	ENSKMAG00000014581	polr2j	79	94.872	Kryptolebias_marmoratus
ENSPNAG00000016595	polr2j	100	95.726	ENSLBEG00000005885	polr2j	100	95.726	Labrus_bergylta
ENSPNAG00000016595	polr2j	100	97.436	ENSLOCG00000001885	polr2j	89	97.436	Lepisosteus_oculatus
ENSPNAG00000016595	polr2j	100	94.017	ENSLAFG00000021507	-	100	94.017	Loxodonta_africana
ENSPNAG00000016595	polr2j	100	84.615	ENSMMUG00000012019	POLR2J	100	84.615	Macaca_mulatta
ENSPNAG00000016595	polr2j	100	95.726	ENSMAMG00000009374	polr2j	100	95.726	Mastacembelus_armatus
ENSPNAG00000016595	polr2j	100	94.872	ENSMZEG00005011932	polr2j	100	94.872	Maylandia_zebra
ENSPNAG00000016595	polr2j	100	94.017	ENSMGAG00000003534	POLR2J	100	94.017	Meleagris_gallopavo
ENSPNAG00000016595	polr2j	100	94.017	ENSMAUG00000013049	Polr2j	100	94.017	Mesocricetus_auratus
ENSPNAG00000016595	polr2j	77	91.111	ENSMICG00000026811	-	91	91.111	Microcebus_murinus
ENSPNAG00000016595	polr2j	100	94.017	ENSMOCG00000001294	Polr2j	100	94.017	Microtus_ochrogaster
ENSPNAG00000016595	polr2j	100	94.872	ENSMMOG00000013265	polr2j	100	94.872	Mola_mola
ENSPNAG00000016595	polr2j	100	85.938	ENSMODG00000013617	-	100	85.938	Monodelphis_domestica
ENSPNAG00000016595	polr2j	100	95.726	ENSMALG00000020749	polr2j	100	95.726	Monopterus_albus
ENSPNAG00000016595	polr2j	100	94.017	MGP_CAROLIEiJ_G0027851	Polr2j	100	94.017	Mus_caroli
ENSPNAG00000016595	polr2j	100	94.017	ENSMUSG00000039771	Polr2j	100	94.017	Mus_musculus
ENSPNAG00000016595	polr2j	100	94.017	MGP_PahariEiJ_G0024434	Polr2j	100	94.017	Mus_pahari
ENSPNAG00000016595	polr2j	100	94.017	MGP_SPRETEiJ_G0028853	Polr2j	100	94.017	Mus_spretus
ENSPNAG00000016595	polr2j	100	94.017	ENSMLUG00000010467	POLR2J	100	94.017	Myotis_lucifugus
ENSPNAG00000016595	polr2j	100	94.017	ENSNGAG00000023412	Polr2j	100	94.017	Nannospalax_galili
ENSPNAG00000016595	polr2j	66	93.506	ENSNBRG00000006580	polr2j	59	93.506	Neolamprologus_brichardi
ENSPNAG00000016595	polr2j	100	73.504	ENSODEG00000008559	-	100	73.504	Octodon_degus
ENSPNAG00000016595	polr2j	100	94.017	ENSODEG00000015648	-	100	94.017	Octodon_degus
ENSPNAG00000016595	polr2j	100	94.872	ENSONIG00000000259	polr2j	100	94.872	Oreochromis_niloticus
ENSPNAG00000016595	polr2j	100	91.453	ENSOANG00000020912	POLR2J	100	91.453	Ornithorhynchus_anatinus
ENSPNAG00000016595	polr2j	100	86.614	ENSOCUG00000023609	POLR2J	100	86.614	Oryctolagus_cuniculus
ENSPNAG00000016595	polr2j	100	94.872	ENSORLG00000029046	polr2j	83	94.872	Oryzias_latipes
ENSPNAG00000016595	polr2j	100	94.872	ENSORLG00020007625	polr2j	83	94.872	Oryzias_latipes_hni
ENSPNAG00000016595	polr2j	100	94.872	ENSORLG00015003457	polr2j	83	94.872	Oryzias_latipes_hsok
ENSPNAG00000016595	polr2j	100	94.017	ENSOMEG00000002097	polr2j	100	94.017	Oryzias_melastigma
ENSPNAG00000016595	polr2j	100	69.531	ENSOGAG00000008250	-	100	69.531	Otolemur_garnettii
ENSPNAG00000016595	polr2j	100	94.017	ENSOARG00000014204	-	98	94.017	Ovis_aries
ENSPNAG00000016595	polr2j	100	94.017	ENSPPRG00000012439	-	100	94.017	Panthera_pardus
ENSPNAG00000016595	polr2j	97	85.088	ENSPTIG00000018714	-	100	90.291	Panthera_tigris_altaica
ENSPNAG00000016595	polr2j	85	92.000	ENSPSIG00000010173	-	100	92.000	Pelodiscus_sinensis
ENSPNAG00000016595	polr2j	100	94.872	ENSPMGG00000021256	polr2j	100	94.872	Periophthalmus_magnuspinnatus
ENSPNAG00000016595	polr2j	100	94.017	ENSPEMG00000015733	Polr2j	100	94.017	Peromyscus_maniculatus_bairdii
ENSPNAG00000016595	polr2j	100	94.017	ENSPCIG00000009026	-	100	94.017	Phascolarctos_cinereus
ENSPNAG00000016595	polr2j	100	94.872	ENSPFOG00000012001	polr2j	99	94.872	Poecilia_formosa
ENSPNAG00000016595	polr2j	100	94.872	ENSPLAG00000014075	polr2j	100	94.872	Poecilia_latipinna
ENSPNAG00000016595	polr2j	100	94.872	ENSPMEG00000020585	polr2j	100	94.872	Poecilia_mexicana
ENSPNAG00000016595	polr2j	100	94.872	ENSPREG00000015255	polr2j	100	94.872	Poecilia_reticulata
ENSPNAG00000016595	polr2j	100	94.017	ENSPCOG00000024573	-	100	94.017	Propithecus_coquereli
ENSPNAG00000016595	polr2j	99	88.793	ENSPVAG00000017770	-	66	88.793	Pteropus_vampyrus
ENSPNAG00000016595	polr2j	100	94.872	ENSPNYG00000014832	polr2j	100	94.872	Pundamilia_nyererei
ENSPNAG00000016595	polr2j	100	94.017	ENSRNOG00000001430	Polr2j	100	94.017	Rattus_norvegicus
ENSPNAG00000016595	polr2j	100	94.017	ENSSBOG00000025579	-	100	94.017	Saimiri_boliviensis_boliviensis
ENSPNAG00000016595	polr2j	59	94.203	ENSSHAG00000010443	-	81	94.203	Sarcophilus_harrisii
ENSPNAG00000016595	polr2j	96	93.805	ENSSFOG00015003371	polr2j	86	93.805	Scleropages_formosus
ENSPNAG00000016595	polr2j	100	94.872	ENSSMAG00000006729	polr2j	100	94.872	Scophthalmus_maximus
ENSPNAG00000016595	polr2j	100	94.872	ENSSDUG00000018490	polr2j	100	94.872	Seriola_dumerili
ENSPNAG00000016595	polr2j	100	94.872	ENSSLDG00000022354	polr2j	100	94.872	Seriola_lalandi_dorsalis
ENSPNAG00000016595	polr2j	100	94.017	ENSSPUG00000010802	-	100	94.017	Sphenodon_punctatus
ENSPNAG00000016595	polr2j	100	94.872	ENSSPAG00000021953	polr2j	100	94.872	Stegastes_partitus
ENSPNAG00000016595	polr2j	100	94.017	ENSSSCG00000007688	-	100	94.017	Sus_scrofa
ENSPNAG00000016595	polr2j	100	77.778	ENSSSCG00000003703	-	83	77.778	Sus_scrofa
ENSPNAG00000016595	polr2j	85	92.000	ENSTGUG00000004501	-	100	92.000	Taeniopygia_guttata
ENSPNAG00000016595	polr2j	59	94.203	ENSTGUG00000004510	-	100	94.203	Taeniopygia_guttata
ENSPNAG00000016595	polr2j	100	94.872	ENSTRUG00000020842	polr2j	100	94.872	Takifugu_rubripes
ENSPNAG00000016595	polr2j	100	94.017	ENSTNIG00000002994	polr2j	100	94.017	Tetraodon_nigroviridis
ENSPNAG00000016595	polr2j	91	78.505	ENSTBEG00000005797	-	70	78.505	Tupaia_belangeri
ENSPNAG00000016595	polr2j	100	94.017	ENSUAMG00000011310	-	100	94.017	Ursus_americanus
ENSPNAG00000016595	polr2j	100	94.017	ENSUMAG00000012594	-	100	94.017	Ursus_maritimus
ENSPNAG00000016595	polr2j	100	94.017	ENSXETG00000001108	polr2j	100	94.017	Xenopus_tropicalis
ENSPNAG00000016595	polr2j	100	94.872	ENSXMAG00000012422	polr2j	100	94.872	Xiphophorus_maculatus