EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000016635 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 3669 bases
Position: chrMAUM01043516.1:1209-4877
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000011019	RVT_1	PF00078.27	1.4e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000017841	-	3603	-	ENSPNAP00000011019	1200 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000016635's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000016635's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000016635	-	96	79.184	ENSPNAG00000003539	-	96	79.184
ENSPNAG00000016635	-	97	70.851	ENSPNAG00000021754	-	94	70.851
ENSPNAG00000016635	-	96	73.107	ENSPNAG00000014625	-	97	73.107
ENSPNAG00000016635	-	82	83.622	ENSPNAG00000017596	-	95	83.622
ENSPNAG00000016635	-	99	72.070	ENSPNAG00000007038	-	99	72.070

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000016635	-	69	40.644	ENSACIG00000009025	-	92	40.644	Amphilophus_citrinellus
ENSPNAG00000016635	-	70	40.260	ENSACIG00000013116	-	81	40.260	Amphilophus_citrinellus
ENSPNAG00000016635	-	90	32.661	ENSACIG00000012161	-	89	32.661	Amphilophus_citrinellus
ENSPNAG00000016635	-	71	42.254	ENSACIG00000010787	-	84	42.254	Amphilophus_citrinellus
ENSPNAG00000016635	-	75	40.667	ENSACIG00000007038	-	90	36.731	Amphilophus_citrinellus
ENSPNAG00000016635	-	90	43.858	ENSAMXG00000042811	-	93	43.360	Astyanax_mexicanus
ENSPNAG00000016635	-	90	38.918	ENSCPBG00000003842	-	85	38.918	Chrysemys_picta_bellii
ENSPNAG00000016635	-	88	33.333	ENSCVAG00000004138	-	96	33.333	Cyprinodon_variegatus
ENSPNAG00000016635	-	84	40.181	ENSELUG00000004618	-	89	39.403	Esox_lucius
ENSPNAG00000016635	-	73	43.508	ENSELUG00000004597	-	89	43.292	Esox_lucius
ENSPNAG00000016635	-	87	30.505	ENSFHEG00000002865	-	86	30.505	Fundulus_heteroclitus
ENSPNAG00000016635	-	81	35.336	ENSFHEG00000007211	-	94	34.417	Fundulus_heteroclitus
ENSPNAG00000016635	-	69	35.766	ENSFHEG00000002853	-	76	35.766	Fundulus_heteroclitus
ENSPNAG00000016635	-	89	35.042	ENSFHEG00000022106	-	94	35.376	Fundulus_heteroclitus
ENSPNAG00000016635	-	50	40.165	ENSGMOG00000005227	-	99	40.165	Gadus_morhua
ENSPNAG00000016635	-	90	35.833	ENSHCOG00000007389	-	94	35.833	Hippocampus_comes
ENSPNAG00000016635	-	90	35.143	ENSHCOG00000007397	-	93	35.143	Hippocampus_comes
ENSPNAG00000016635	-	89	30.819	ENSHCOG00000007436	-	97	30.819	Hippocampus_comes
ENSPNAG00000016635	-	90	35.000	ENSHCOG00000000471	-	91	35.000	Hippocampus_comes
ENSPNAG00000016635	-	63	39.278	ENSLBEG00000006732	-	88	39.278	Labrus_bergylta
ENSPNAG00000016635	-	63	39.729	ENSLBEG00000004576	-	88	39.729	Labrus_bergylta
ENSPNAG00000016635	-	61	38.336	ENSLBEG00000003745	-	85	38.336	Labrus_bergylta
ENSPNAG00000016635	-	67	34.696	ENSLACG00000006357	-	97	34.696	Latimeria_chalumnae
ENSPNAG00000016635	-	89	38.434	ENSLOCG00000017064	-	98	38.434	Lepisosteus_oculatus
ENSPNAG00000016635	-	87	39.015	ENSLOCG00000011928	-	99	39.015	Lepisosteus_oculatus
ENSPNAG00000016635	-	88	35.478	ENSMAMG00000019985	-	90	35.570	Mastacembelus_armatus
ENSPNAG00000016635	-	89	36.822	ENSONIG00000020875	-	88	36.822	Oreochromis_niloticus
ENSPNAG00000016635	-	90	31.250	ENSOMEG00000015368	-	99	31.250	Oryzias_melastigma
ENSPNAG00000016635	-	67	34.981	ENSPMGG00000017392	-	84	34.981	Periophthalmus_magnuspinnatus
ENSPNAG00000016635	-	53	37.066	ENSPMGG00000001593	-	63	37.066	Periophthalmus_magnuspinnatus
ENSPNAG00000016635	-	70	39.146	ENSPLAG00000023379	-	99	39.146	Poecilia_latipinna
ENSPNAG00000016635	-	68	40.511	ENSPLAG00000022994	-	76	40.511	Poecilia_latipinna
ENSPNAG00000016635	-	68	38.200	ENSPLAG00000011817	-	80	38.443	Poecilia_latipinna
ENSPNAG00000016635	-	67	40.870	ENSPLAG00000011810	-	74	40.870	Poecilia_latipinna
ENSPNAG00000016635	-	68	39.903	ENSPMEG00000003431	-	77	39.903	Poecilia_mexicana
ENSPNAG00000016635	-	70	36.278	ENSPMEG00000008574	-	77	36.278	Poecilia_mexicana
ENSPNAG00000016635	-	88	33.271	ENSPREG00000005456	-	86	33.271	Poecilia_reticulata
ENSPNAG00000016635	-	89	33.364	ENSPREG00000005756	-	92	33.364	Poecilia_reticulata
ENSPNAG00000016635	-	90	34.787	ENSPREG00000012484	-	90	34.787	Poecilia_reticulata
ENSPNAG00000016635	-	69	40.433	ENSXCOG00000008881	-	92	40.433	Xiphophorus_couchianus
ENSPNAG00000016635	-	90	41.582	ENSXCOG00000013093	-	93	41.582	Xiphophorus_couchianus
ENSPNAG00000016635	-	81	39.256	ENSXMAG00000028672	-	87	39.256	Xiphophorus_maculatus