EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000016753 (Gene tree)
Gene ID: 108433554
Gene Symbol: exd3
Alias: si:ch211-183l21.3
Full Name: exonuclease 3'-5' domain containing 3
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 64242 bases
Position: chrKV575423.1:1657692-1721933
Accession: 108433554
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000011055	DNA_pol_A_exo1	PF01612.20	3.3e-19	1	1
ENSPNAP00000030154	DNA_pol_A_exo1	PF01612.20	3.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000035959	-	2469	-	ENSPNAP00000011055	822 (aa)	-	-
ENSPNAT00000017926	-	5133	XM_017708199	ENSPNAP00000030154	865 (aa)	XP_017563688	UPI0008148886

Gene Model

Click here to download ENSPNAG00000016753's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000016753's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000016753	exd3	98	41.753	ENSG00000187609	EXD3	97	41.800	Homo_sapiens
ENSPNAG00000016753	exd3	99	51.469	ENSAPOG00000015520	exd3	98	51.351	Acanthochromis_polyacanthus
ENSPNAG00000016753	exd3	99	52.742	ENSACIG00000005561	exd3	94	52.381	Amphilophus_citrinellus
ENSPNAG00000016753	exd3	99	56.705	ENSAOCG00000007721	exd3	97	56.250	Amphiprion_ocellaris
ENSPNAG00000016753	exd3	99	56.932	ENSAPEG00000007019	exd3	98	56.477	Amphiprion_percula
ENSPNAG00000016753	exd3	99	54.152	ENSATEG00000019941	exd3	99	54.152	Anabas_testudineus
ENSPNAG00000016753	exd3	84	46.568	ENSAPLG00000015358	EXD3	99	46.102	Anas_platyrhynchos
ENSPNAG00000016753	exd3	98	39.977	ENSANAG00000019674	EXD3	97	39.816	Aotus_nancymaae
ENSPNAG00000016753	exd3	99	54.514	ENSACLG00000021922	exd3	98	55.086	Astatotilapia_calliptera
ENSPNAG00000016753	exd3	99	77.247	ENSAMXG00000019494	exd3	99	77.361	Astyanax_mexicanus
ENSPNAG00000016753	exd3	96	40.984	ENSBTAG00000023788	EXD3	98	40.984	Bos_taurus
ENSPNAG00000016753	exd3	99	40.506	ENSCJAG00000013170	EXD3	97	40.758	Callithrix_jacchus
ENSPNAG00000016753	exd3	98	42.612	ENSCAFG00000019444	EXD3	98	42.841	Canis_familiaris
ENSPNAG00000016753	exd3	95	42.031	ENSCAFG00020003171	EXD3	91	42.149	Canis_lupus_dingo
ENSPNAG00000016753	exd3	99	40.206	ENSCCAG00000027996	EXD3	97	40.046	Cebus_capucinus
ENSPNAG00000016753	exd3	98	42.431	ENSCSAG00000016661	EXD3	97	42.016	Chlorocebus_sabaeus
ENSPNAG00000016753	exd3	85	46.296	ENSCPBG00000011686	EXD3	89	46.164	Chrysemys_picta_bellii
ENSPNAG00000016753	exd3	92	31.043	ENSCING00000002195	-	98	30.552	Ciona_intestinalis
ENSPNAG00000016753	exd3	54	38.961	ENSCSAVG00000005704	-	93	38.961	Ciona_savignyi
ENSPNAG00000016753	exd3	98	41.447	ENSCANG00000040692	EXD3	96	41.447	Colobus_angolensis_palliatus
ENSPNAG00000016753	exd3	99	52.105	ENSCSEG00000000750	exd3	99	52.867	Cynoglossus_semilaevis
ENSPNAG00000016753	exd3	99	53.995	ENSCVAG00000011560	exd3	98	54.057	Cyprinodon_variegatus
ENSPNAG00000016753	exd3	99	65.856	ENSDARG00000063140	exd3	100	65.509	Danio_rerio
ENSPNAG00000016753	exd3	96	43.266	ENSEASG00005016023	EXD3	96	43.266	Equus_asinus_asinus
ENSPNAG00000016753	exd3	98	43.224	ENSECAG00000017546	EXD3	95	43.190	Equus_caballus
ENSPNAG00000016753	exd3	69	50.394	ENSEEUG00000000405	-	86	46.241	Erinaceus_europaeus
ENSPNAG00000016753	exd3	98	58.324	ENSELUG00000007181	exd3	98	58.324	Esox_lucius
ENSPNAG00000016753	exd3	98	41.839	ENSFCAG00000003579	EXD3	96	41.839	Felis_catus
ENSPNAG00000016753	exd3	93	44.391	ENSFALG00000005132	EXD3	98	44.270	Ficedula_albicollis
ENSPNAG00000016753	exd3	99	48.331	ENSFHEG00000011352	exd3	98	48.331	Fundulus_heteroclitus
ENSPNAG00000016753	exd3	60	39.638	ENSGMOG00000013542	-	99	39.638	Gadus_morhua
ENSPNAG00000016753	exd3	99	44.054	ENSGALG00000052646	EXD3	99	43.955	Gallus_gallus
ENSPNAG00000016753	exd3	99	53.432	ENSGAFG00000007328	exd3	98	53.432	Gambusia_affinis
ENSPNAG00000016753	exd3	85	55.646	ENSGACG00000017442	exd3	100	55.646	Gasterosteus_aculeatus
ENSPNAG00000016753	exd3	83	41.322	ENSGAGG00000011888	EXD3	92	41.408	Gopherus_agassizii
ENSPNAG00000016753	exd3	91	44.211	ENSGGOG00000024724	EXD3	97	47.012	Gorilla_gorilla
ENSPNAG00000016753	exd3	99	54.400	ENSHBUG00000001405	exd3	98	54.971	Haplochromis_burtoni
ENSPNAG00000016753	exd3	98	51.501	ENSHCOG00000020087	exd3	99	51.445	Hippocampus_comes
ENSPNAG00000016753	exd3	99	70.392	ENSIPUG00000020343	exd3	99	70.392	Ictalurus_punctatus
ENSPNAG00000016753	exd3	98	54.005	ENSKMAG00000011881	exd3	97	54.400	Kryptolebias_marmoratus
ENSPNAG00000016753	exd3	95	52.794	ENSLBEG00000004079	exd3	94	52.794	Labrus_bergylta
ENSPNAG00000016753	exd3	99	52.055	ENSLOCG00000002330	exd3	99	52.397	Lepisosteus_oculatus
ENSPNAG00000016753	exd3	85	40.353	ENSLAFG00000001122	EXD3	97	40.570	Loxodonta_africana
ENSPNAG00000016753	exd3	98	42.383	ENSMFAG00000037569	EXD3	96	42.383	Macaca_fascicularis
ENSPNAG00000016753	exd3	98	41.924	ENSMNEG00000033487	EXD3	97	41.516	Macaca_nemestrina
ENSPNAG00000016753	exd3	98	40.484	ENSMLEG00000040548	EXD3	97	40.091	Mandrillus_leucophaeus
ENSPNAG00000016753	exd3	88	52.911	ENSMAMG00000008407	exd3	95	53.558	Mastacembelus_armatus
ENSPNAG00000016753	exd3	99	54.514	ENSMZEG00005017270	exd3	98	55.086	Maylandia_zebra
ENSPNAG00000016753	exd3	84	44.564	ENSMGAG00000001267	EXD3	99	44.698	Meleagris_gallopavo
ENSPNAG00000016753	exd3	96	53.902	ENSMMOG00000021267	exd3	99	54.187	Mola_mola
ENSPNAG00000016753	exd3	59	45.558	ENSMODG00000028091	-	98	45.455	Monodelphis_domestica
ENSPNAG00000016753	exd3	99	52.062	ENSMALG00000018523	exd3	96	54.345	Monopterus_albus
ENSPNAG00000016753	exd3	96	40.445	ENSMPUG00000015130	EXD3	96	40.300	Mustela_putorius_furo
ENSPNAG00000016753	exd3	99	53.542	ENSNBRG00000019734	exd3	98	53.542	Neolamprologus_brichardi
ENSPNAG00000016753	exd3	84	42.355	ENSNLEG00000009095	-	94	42.490	Nomascus_leucogenys
ENSPNAG00000016753	exd3	57	49.254	ENSMEUG00000002121	-	56	49.254	Notamacropus_eugenii
ENSPNAG00000016753	exd3	85	53.731	ENSONIG00000003880	exd3	97	54.570	Oreochromis_niloticus
ENSPNAG00000016753	exd3	85	40.239	ENSOANG00000012485	-	99	40.239	Ornithorhynchus_anatinus
ENSPNAG00000016753	exd3	98	52.692	ENSORLG00000010377	exd3	98	52.620	Oryzias_latipes
ENSPNAG00000016753	exd3	99	52.506	ENSORLG00020012287	exd3	98	52.506	Oryzias_latipes_hni
ENSPNAG00000016753	exd3	98	52.463	ENSORLG00015001156	exd3	98	52.392	Oryzias_latipes_hsok
ENSPNAG00000016753	exd3	99	52.435	ENSOMEG00000023060	exd3	98	52.847	Oryzias_melastigma
ENSPNAG00000016753	exd3	98	41.514	ENSPPAG00000042435	EXD3	97	41.789	Pan_paniscus
ENSPNAG00000016753	exd3	98	41.935	ENSPPRG00000004634	EXD3	96	42.051	Panthera_pardus
ENSPNAG00000016753	exd3	98	41.264	ENSPANG00000026338	EXD3	97	40.842	Papio_anubis
ENSPNAG00000016753	exd3	99	55.986	ENSPKIG00000021103	exd3	99	55.909	Paramormyrops_kingsleyae
ENSPNAG00000016753	exd3	86	45.828	ENSPSIG00000007745	EXD3	88	45.373	Pelodiscus_sinensis
ENSPNAG00000016753	exd3	99	52.765	ENSPMGG00000023999	exd3	99	52.880	Periophthalmus_magnuspinnatus
ENSPNAG00000016753	exd3	67	40.339	ENSPMAG00000006135	-	99	39.425	Petromyzon_marinus
ENSPNAG00000016753	exd3	99	44.147	ENSPCIG00000006180	-	98	44.147	Phascolarctos_cinereus
ENSPNAG00000016753	exd3	99	52.709	ENSPFOG00000019685	exd3	99	52.935	Poecilia_formosa
ENSPNAG00000016753	exd3	88	56.031	ENSPLAG00000022290	exd3	95	56.031	Poecilia_latipinna
ENSPNAG00000016753	exd3	99	54.846	ENSPMEG00000008007	exd3	98	54.846	Poecilia_mexicana
ENSPNAG00000016753	exd3	99	54.971	ENSPREG00000008142	exd3	98	54.971	Poecilia_reticulata
ENSPNAG00000016753	exd3	50	60.000	ENSPCAG00000005094	-	57	60.000	Procavia_capensis
ENSPNAG00000016753	exd3	99	54.286	ENSPNYG00000012849	exd3	98	54.857	Pundamilia_nyererei
ENSPNAG00000016753	exd3	98	41.609	ENSRBIG00000031855	EXD3	97	41.183	Rhinopithecus_bieti
ENSPNAG00000016753	exd3	98	41.909	ENSRROG00000040120	EXD3	97	41.379	Rhinopithecus_roxellana
ENSPNAG00000016753	exd3	99	39.610	ENSSBOG00000022389	EXD3	92	39.501	Saimiri_boliviensis_boliviensis
ENSPNAG00000016753	exd3	85	42.056	ENSSHAG00000001276	-	98	42.348	Sarcophilus_harrisii
ENSPNAG00000016753	exd3	99	56.962	ENSSFOG00015023063	exd3	95	58.234	Scleropages_formosus
ENSPNAG00000016753	exd3	99	53.689	ENSSMAG00000019809	exd3	98	53.820	Scophthalmus_maximus
ENSPNAG00000016753	exd3	89	56.178	ENSSDUG00000006265	exd3	96	56.178	Seriola_dumerili
ENSPNAG00000016753	exd3	91	54.668	ENSSLDG00000004671	exd3	99	54.668	Seriola_lalandi_dorsalis
ENSPNAG00000016753	exd3	99	54.002	ENSSPAG00000017972	exd3	99	54.228	Stegastes_partitus
ENSPNAG00000016753	exd3	92	40.587	ENSSSCG00000005855	EXD3	97	40.465	Sus_scrofa
ENSPNAG00000016753	exd3	84	46.757	ENSTGUG00000002494	EXD3	99	46.757	Taeniopygia_guttata
ENSPNAG00000016753	exd3	99	52.444	ENSTRUG00000010236	exd3	95	52.444	Takifugu_rubripes
ENSPNAG00000016753	exd3	87	52.042	ENSTNIG00000013212	exd3	96	51.711	Tetraodon_nigroviridis
ENSPNAG00000016753	exd3	51	52.000	ENSTTRG00000003815	-	56	52.000	Tursiops_truncatus
ENSPNAG00000016753	exd3	93	41.291	ENSUAMG00000021470	EXD3	99	41.291	Ursus_americanus
ENSPNAG00000016753	exd3	96	42.186	ENSVVUG00000029403	EXD3	93	42.186	Vulpes_vulpes
ENSPNAG00000016753	exd3	88	55.871	ENSXMAG00000001467	exd3	95	55.871	Xiphophorus_maculatus